RNA–Protein interactions for RNA: YOR227W

HER1, Transcript of Protein of unknown function, yeastyeast

Gene HER1, Length 3,741 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HER1YOR227W ISW2Q08773 1120 aa2.92□□□□□ -1.94
HER1YOR227W YCK3P39962 524 aa2.91□□□□□ -1.94
HER1YOR227W NOP8Q08287 484 aaPredicted RBP2.91□□□□□ -1.94
HER1YOR227W CKB1P43639 278 aa2.9□□□□□ -1.94
HER1YOR227W DCD1P06773 312 aa2.89□□□□□ -1.95
HER1YOR227W CST9Q06032 482 aa2.89□□□□□ -1.95
HER1YOR227W BNR1P40450 1375 aa2.88□□□□□ -1.95
HER1YOR227W YPR148CQ06523 435 aa2.86□□□□□ -1.95
HER1YOR227W REB1P21538 810 aa2.86□□□□□ -1.95
HER1YOR227W YML020WQ03722 664 aa2.86□□□□□ -1.95
HER1YOR227W MGA2P40578 1113 aa2.85□□□□□ -1.95
HER1YOR227W YAH1Q12184 172 aaKnown RBP2.85□□□□□ -1.95
HER1YOR227W IKI3Q06706 1349 aaKnown RBP2.85□□□□□ -1.95
HER1YOR227W RAV1P47104 1357 aa2.83□□□□□ -1.96
HER1YOR227W RAM2P29703 316 aa2.83□□□□□ -1.96
HER1YOR227W DSF2P38213 736 aa2.82□□□□□ -1.96
HER1YOR227W PSD2P53037 1138 aaKnown RBP2.82□□□□□ -1.96
HER1YOR227W MAM3Q12296 706 aa2.82□□□□□ -1.96
HER1YOR227W KIN1P13185 1064 aa2.81□□□□□ -1.96
HER1YOR227W ARP8Q12386 881 aaKnown RBP RIP-Chip data2.81□□□□□ -1.96not detected
HER1YOR227W HOP09932 586 aa2.81□□□□□ -1.96
HER1YOR227W YKR023WP36119 530 aaKnown RBP2.8□□□□□ -1.96
HER1YOR227W GUA1P38625 525 aaKnown RBP2.8□□□□□ -1.96
HER1YOR227W SSM4P40318 1319 aa2.8□□□□□ -1.96
HER1YOR227W MLP1Q02455 1875 aaKnown RBP2.8□□□□□ -1.96
HER1YOR227W MRX12P47084 519 aa2.8□□□□□ -1.96
HER1YOR227W SET1P38827 1080 aaKnown RBP2.79□□□□□ -1.96
HER1YOR227W ATG36P46983 293 aa2.79□□□□□ -1.96
HER1YOR227W VPS70P47161 811 aa2.79□□□□□ -1.96
HER1YOR227W SPB4P25808 606 aaPredicted RBP2.78□□□□□ -1.96
HER1YOR227W SLX8P40072 274 aa2.78□□□□□ -1.96
HER1YOR227W URN1Q06525 465 aaKnown RBP2.78□□□□□ -1.96
HER1YOR227W SUB2Q07478 446 aaKnown RBP2.78□□□□□ -1.96
HER1YOR227W AIM44Q99299 758 aa2.78□□□□□ -1.96
HER1YOR227W RCR1P38212 213 aa2.78□□□□□ -1.96
HER1YOR227W YAP3P38749 330 aa2.78□□□□□ -1.96
HER1YOR227W NUP42P49686 430 aaKnown RBP2.78□□□□□ -1.97
HER1YOR227W RSM7P47150 247 aa2.77□□□□□ -1.97
HER1YOR227W YNR021WP53723 404 aaKnown RBP2.77□□□□□ -1.97
HER1YOR227W MAK10Q02197 733 aa2.77□□□□□ -1.97
HER1YOR227W PAM1P37304 830 aaKnown RBP2.77□□□□□ -1.97
HER1YOR227W EDE1P34216 1381 aa2.76□□□□□ -1.97
HER1YOR227W DIT2P21595 489 aa2.76□□□□□ -1.97
HER1YOR227W GLC3P32775 704 aa2.76□□□□□ -1.97
HER1YOR227W AIM7Q12156 149 aa2.76□□□□□ -1.97
HER1YOR227W ADE6P38972 1358 aaKnown RBP2.76□□□□□ -1.97
HER1YOR227W HKR1P41809 1802 aa2.76□□□□□ -1.97
HER1YOR227W FIG2P25653 1609 aa2.76□□□□□ -1.97
HER1YOR227W GEF1P37020 779 aa2.75□□□□□ -1.97
HER1YOR227W CDC27P38042 758 aa2.75□□□□□ -1.97
HER1YOR227W RTC1Q08281 1341 aa2.75□□□□□ -1.97
HER1YOR227W GLN1P32288 370 aaKnown RBP2.75□□□□□ -1.97
HER1YOR227W IPL1P38991 367 aa2.75□□□□□ -1.97
HER1YOR227W PBS2P08018 668 aa2.74□□□□□ -1.97
HER1YOR227W SSA1P10591 642 aaKnown RBP2.74□□□□□ -1.97
HER1YOR227W SEN54Q02825 467 aaPredicted RBP2.74□□□□□ -1.97
HER1YOR227W YLL066CQ99208 1374 aa2.74□□□□□ -1.97
HER1YOR227W PKC1P24583 1151 aa2.73□□□□□ -1.97
HER1YOR227W YIL055CP40523 627 aaKnown RBP2.73□□□□□ -1.97
HER1YOR227W LAM6Q08001 693 aa2.73□□□□□ -1.97
HER1YOR227W YML133CQ03099 1374 aa2.73□□□□□ -1.97
HER1YOR227W YLL067CQ07888 1374 aa2.73□□□□□ -1.97
HER1YOR227W HPC2Q01448 625 aa2.72□□□□□ -1.97
HER1YOR227W TFB3Q03290 321 aa2.72□□□□□ -1.97
HER1YOR227W DUR1,2P32528 1835 aaKnown RBP2.72□□□□□ -1.97
HER1YOR227W AI2P03876 854 aa2.71□□□□□ -1.98
HER1YOR227W OCA5P38738 679 aa2.71□□□□□ -1.98
HER1YOR227W TOP1P04786 769 aa2.71□□□□□ -1.98
HER1YOR227W MRPL32P25348 183 aa2.71□□□□□ -1.98
HER1YOR227W FAR11P53917 953 aa2.71□□□□□ -1.98
HER1YOR227W TFC8Q12308 588 aa2.71□□□□□ -1.98
HER1YOR227W SNU71P53207 620 aaKnown RBP2.7□□□□□ -1.98
HER1YOR227W SWE1P32944 819 aa2.7□□□□□ -1.98
HER1YOR227W NOB1Q08444 459 aaKnown RBP2.7□□□□□ -1.98
HER1YOR227W PSK1P31374 1356 aa2.7□□□□□ -1.98
HER1YOR227W SPC42P36094 363 aa2.7□□□□□ -1.98
HER1YOR227W YMR196WQ04336 1088 aa2.7□□□□□ -1.98
HER1YOR227W IES2P40154 320 aa2.69□□□□□ -1.98
HER1YOR227W RRN6P32786 894 aa2.69□□□□□ -1.98
HER1YOR227W ATG32P40458 529 aa2.69□□□□□ -1.98
HER1YOR227W RTT106P40161 455 aa2.69□□□□□ -1.98
HER1YOR227W MAK11P20484 414 aaKnown RBP2.68□□□□□ -1.98
HER1YOR227W TYS1P36421 394 aaKnown RBP2.68□□□□□ -1.98
HER1YOR227W BIM1P40013 344 aa2.68□□□□□ -1.98
HER1YOR227W DOS2P54858 310 aa2.68□□□□□ -1.98
HER1YOR227W ERG12P07277 443 aa2.68□□□□□ -1.98
HER1YOR227W PRP43P53131 767 aaKnown RBP2.68□□□□□ -1.98
HER1YOR227W KTR1P27810 393 aaKnown RBP2.67□□□□□ -1.98
HER1YOR227W SSF1P38789 453 aaPredicted RBP2.67□□□□□ -1.98
HER1YOR227W RRP15Q06511 250 aaPredicted RBP2.67□□□□□ -1.98
HER1YOR227W BCH2P36122 765 aa2.66□□□□□ -1.98
HER1YOR227W YLR419WQ06698 1435 aaKnown RBP2.66□□□□□ -1.98
HER1YOR227W COX6P00427 148 aa2.65□□□□□ -1.98
HER1YOR227W YML083CQ04526 418 aa2.65□□□□□ -1.98
HER1YOR227W MAK21Q12176 1025 aaKnown RBP2.65□□□□□ -1.98
HER1YOR227W EDS1P38073 919 aa2.65□□□□□ -1.99
HER1YOR227W TPO2P53283 614 aa2.65□□□□□ -1.99
HER1YOR227W YDR090CQ03193 310 aa2.65□□□□□ -1.99
HER1YOR227W TIF1P10081 395 aaKnown RBP2.65□□□□□ -1.99
HER1YOR227W COQ8P27697 501 aa2.65□□□□□ -1.99
Retrieved 100 of 5,963 RNA–protein pairs in 15.4 ms