RNA–Protein interactions for RNA: YOL006C

TOP1, Transcript of Topoisomerase I, yeast

Gene TOP1, Length 2,310 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TOP1	YOL006C	YOL057W	Q08225	711 aa		4.31	□□□□□ -1.72
TOP1	YOL006C	SRP40	P32583	406 aa	Predicted RBP	4.3	□□□□□ -1.72
TOP1	YOL006C	TGL4	P36165	910 aa		4.3	□□□□□ -1.72
TOP1	YOL006C	EDS1	P38073	919 aa		4.3	□□□□□ -1.72
TOP1	YOL006C	TYW1	Q08960	810 aa	Known RBP	4.3	□□□□□ -1.72
TOP1	YOL006C	SEC8	P32855	1065 aa		4.3	□□□□□ -1.72
TOP1	YOL006C	YHL050C	P38721	697 aa		4.3	□□□□□ -1.72
TOP1	YOL006C	YHR219W	P38900	624 aa		4.3	□□□□□ -1.72
TOP1	YOL006C	BRE1	Q07457	700 aa	Known RBP	4.3	□□□□□ -1.72
TOP1	YOL006C	STB3	Q12427	513 aa		4.3	□□□□□ -1.72
TOP1	YOL006C	YEL077C	Q3E7X8	1277 aa		4.3	□□□□□ -1.72
TOP1	YOL006C	ENO1	P00924	437 aa	Known RBP	4.29	□□□□□ -1.72
TOP1	YOL006C	CIT2	P08679	460 aa		4.29	□□□□□ -1.72
TOP1	YOL006C	SUP45	P12385	437 aa	Known RBP	4.29	□□□□□ -1.72
TOP1	YOL006C	GAL11	P19659	1081 aa		4.29	□□□□□ -1.72
TOP1	YOL006C	BCH2	P36122	765 aa		4.29	□□□□□ -1.72
TOP1	YOL006C	NOP2	P40991	618 aa	Known RBP	4.29	□□□□□ -1.72
TOP1	YOL006C	TY4A-J	P47023	414 aa		4.29	□□□□□ -1.72
TOP1	YOL006C	YDR090C	Q03193	310 aa		4.29	□□□□□ -1.72
TOP1	YOL006C	TOA1	P32773	286 aa		4.29	□□□□□ -1.72
TOP1	YOL006C	YKL091C	P33324	310 aa	Known RBP	4.29	□□□□□ -1.72
TOP1	YOL006C	CSE4	P36012	229 aa		4.29	□□□□□ -1.72
TOP1	YOL006C	POB3	Q04636	552 aa	Known RBP	4.29	□□□□□ -1.72
TOP1	YOL006C	WHI5	Q12416	295 aa		4.29	□□□□□ -1.72
TOP1	YOL006C	PPX1	P38698	397 aa		4.28	□□□□□ -1.72
TOP1	YOL006C	AIM21	P40563	679 aa		4.28	□□□□□ -1.72
TOP1	YOL006C	IOC3	P43596	787 aa		4.28	□□□□□ -1.72
TOP1	YOL006C	YDL121C	Q07541	149 aa		4.28	□□□□□ -1.72
TOP1	YOL006C	VPS29	P38759	282 aa		4.28	□□□□□ -1.72
TOP1	YOL006C	VAC8	P39968	578 aa		4.28	□□□□□ -1.72
TOP1	YOL006C	EPS1	P40557	701 aa		4.28	□□□□□ -1.72
TOP1	YOL006C	VHR2	P40041	505 aa		4.27	□□□□□ -1.73
TOP1	YOL006C	THI12	P42883	340 aa		4.27	□□□□□ -1.73
TOP1	YOL006C	THI5	P43534	340 aa		4.27	□□□□□ -1.73
TOP1	YOL006C	THI11	P47183	340 aa		4.27	□□□□□ -1.73
TOP1	YOL006C	TEA1	P47988	759 aa		4.27	□□□□□ -1.73
TOP1	YOL006C	MRX10	Q05648	414 aa		4.27	□□□□□ -1.73
TOP1	YOL006C	THI13	Q07748	340 aa		4.27	□□□□□ -1.73
TOP1	YOL006C	HIF1	Q12373	385 aa		4.27	□□□□□ -1.73
TOP1	YOL006C	ENO2	P00925	437 aa	Known RBP	4.27	□□□□□ -1.73
TOP1	YOL006C	GRX4	P32642	244 aa		4.27	□□□□□ -1.73
TOP1	YOL006C	RPS0B	P46654	252 aa	Known RBP	4.27	□□□□□ -1.73
TOP1	YOL006C	RAD59	Q12223	238 aa		4.27	□□□□□ -1.73
TOP1	YOL006C	TRL1	P09880	827 aa	Known RBP	4.26	□□□□□ -1.73
TOP1	YOL006C	RPA135	P22138	1203 aa	Known RBP	4.26	□□□□□ -1.73
TOP1	YOL006C	ALD3	P54114	506 aa		4.26	□□□□□ -1.73
TOP1	YOL006C	UBP3	Q01477	912 aa	Known RBP RIP-Chip data	4.26	□□□□□ -1.73	not detected
TOP1	YOL006C	KAR5	Q04746	504 aa		4.26	□□□□□ -1.73
TOP1	YOL006C	VMA4	P22203	233 aa	Known RBP	4.26	□□□□□ -1.73
TOP1	YOL006C	MET1	P36150	593 aa		4.26	□□□□□ -1.73
TOP1	YOL006C	GRS1	P38088	690 aa	Known RBP	4.26	□□□□□ -1.73
TOP1	YOL006C	ISW1	P38144	1129 aa		4.26	□□□□□ -1.73
TOP1	YOL006C	MGE1	P38523	228 aa		4.26	□□□□□ -1.73
TOP1	YOL006C	ERP2	P39704	215 aa		4.25	□□□□□ -1.73
TOP1	YOL006C	BOI2	P39969	1040 aa		4.25	□□□□□ -1.73
TOP1	YOL006C	MDJ2	P42834	146 aa		4.25	□□□□□ -1.73
TOP1	YOL006C	RIM21	P48565	533 aa		4.25	□□□□□ -1.73
TOP1	YOL006C	TMA64	Q04600	565 aa	Known RBP	4.25	□□□□□ -1.73
TOP1	YOL006C	KIC1	P38692	1080 aa		4.24	□□□□□ -1.73
TOP1	YOL006C	RPT2	P40327	437 aa	Known RBP	4.24	□□□□□ -1.73
TOP1	YOL006C	YJR107W	P47145	328 aa		4.24	□□□□□ -1.73
TOP1	YOL006C	YGL081W	P53156	320 aa		4.24	□□□□□ -1.73
TOP1	YOL006C	ALD6	P54115	500 aa	Known RBP	4.24	□□□□□ -1.73
TOP1	YOL006C	ECM23	Q02710	187 aa		4.24	□□□□□ -1.73
TOP1	YOL006C	RPN4	Q03465	531 aa		4.24	□□□□□ -1.73
TOP1	YOL006C	GIR2	Q03768	265 aa	Predicted RBP	4.24	□□□□□ -1.73
TOP1	YOL006C	ECM16	Q04217	1267 aa	Known RBP	4.24	□□□□□ -1.73
TOP1	YOL006C	YGR161W-C	Q3E744	92 aa		4.24	□□□□□ -1.73
TOP1	YOL006C	KAR1	P11927	433 aa		4.24	□□□□□ -1.73
TOP1	YOL006C	YDJ1	P25491	409 aa	Known RBP	4.24	□□□□□ -1.73
TOP1	YOL006C	MPE1	P35728	441 aa	Known RBP	4.24	□□□□□ -1.73
TOP1	YOL006C	PKH3	Q03306	898 aa	Predicted RBP	4.24	□□□□□ -1.73
TOP1	YOL006C	NSE3	Q05541	303 aa		4.24	□□□□□ -1.73
TOP1	YOL006C	RAD2	P07276	1031 aa		4.23	□□□□□ -1.73
TOP1	YOL006C	SPT5	P27692	1063 aa	Known RBP	4.23	□□□□□ -1.73
TOP1	YOL006C	PTC3	P34221	468 aa	Known RBP	4.23	□□□□□ -1.73
TOP1	YOL006C	BDF1	P35817	686 aa		4.23	□□□□□ -1.73
TOP1	YOL006C	TPS3	P38426	1054 aa	Known RBP	4.23	□□□□□ -1.73
TOP1	YOL006C	YJL049W	P47048	450 aa		4.23	□□□□□ -1.73
TOP1	YOL006C	SSD1	P24276	1250 aa	Known RBP RIP-Chip data	4.22	□□□□□ -1.73	not detected
TOP1	YOL006C	GRX7	P38068	203 aa		4.22	□□□□□ -1.73
TOP1	YOL006C	NOC2	P39744	710 aa	Known RBP	4.22	□□□□□ -1.73
TOP1	YOL006C	BUD6	P41697	788 aa		4.22	□□□□□ -1.73
TOP1	YOL006C	DNM1	P54861	757 aa		4.22	□□□□□ -1.73
TOP1	YOL006C	CEF1	Q03654	590 aa	Predicted RBP	4.22	□□□□□ -1.73
TOP1	YOL006C	YLR326W	Q06170	240 aa	Known RBP	4.22	□□□□□ -1.73
TOP1	YOL006C	SSF2	Q12153	453 aa	Predicted RBP	4.22	□□□□□ -1.73
TOP1	YOL006C	MNL2	Q12205	849 aa		4.22	□□□□□ -1.73
TOP1	YOL006C	STI1	P15705	589 aa	Known RBP RIP-Chip data	4.22	□□□□□ -1.73	not detected
TOP1	YOL006C	PEP12	P32854	288 aa		4.22	□□□□□ -1.73
TOP1	YOL006C	PBP2	P38151	413 aa	Known RBP RIP-Chip data	4.22	□□□□□ -1.73	not detected
TOP1	YOL006C	MNN1	P39106	762 aa		4.22	□□□□□ -1.73
TOP1	YOL006C	YJR142W	P47173	342 aa		4.22	□□□□□ -1.73
TOP1	YOL006C	HST2	P53686	357 aa		4.22	□□□□□ -1.73
TOP1	YOL006C	UBX7	P38349	436 aa		4.21	□□□□□ -1.74
TOP1	YOL006C	STS1	P38637	319 aa		4.21	□□□□□ -1.74
TOP1	YOL006C	CDC53	Q12018	815 aa	Known RBP	4.21	□□□□□ -1.74
TOP1	YOL006C	SEC6	P32844	805 aa		4.21	□□□□□ -1.74
TOP1	YOL006C	VPS27	P40343	622 aa	Known RBP	4.21	□□□□□ -1.74
TOP1	YOL006C	KTR7	P40504	517 aa		4.21	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 14 ms