RNA–Protein interactions for RNA: YNR060W

FRE4, Transcript of Ferric reductase, yeast

Gene FRE4, Length 2,160 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
FRE4	YNR060W	NOB1	Q08444	459 aa	Known RBP	5.02	□□□□□ -1.61
FRE4	YNR060W	TYW1	Q08960	810 aa	Known RBP	5.02	□□□□□ -1.61
FRE4	YNR060W	HST2	P53686	357 aa		5.01	□□□□□ -1.61
FRE4	YNR060W	SEN54	Q02825	467 aa	Predicted RBP	5.01	□□□□□ -1.61
FRE4	YNR060W	TUM1	Q08686	304 aa	Known RBP	5	□□□□□ -1.61
FRE4	YNR060W	BMT6	Q12291	365 aa		5	□□□□□ -1.61
FRE4	YNR060W	CPS1	P27614	576 aa		4.99	□□□□□ -1.61
FRE4	YNR060W	PAM1	P37304	830 aa	Known RBP	4.99	□□□□□ -1.61
FRE4	YNR060W	PEX29	Q03370	554 aa		4.99	□□□□□ -1.61
FRE4	YNR060W	SCJ1	P25303	377 aa		4.99	□□□□□ -1.61
FRE4	YNR060W	TTI1	P36097	1038 aa		4.99	□□□□□ -1.61
FRE4	YNR060W	BIO2	P32451	375 aa		4.98	□□□□□ -1.61
FRE4	YNR060W	NMA111	P53920	997 aa		4.98	□□□□□ -1.61
FRE4	YNR060W	SAP30	P38429	201 aa		4.98	□□□□□ -1.61
FRE4	YNR060W	ISU2	Q12056	156 aa		4.98	□□□□□ -1.61
FRE4	YNR060W	RPP1B	P10622	106 aa	Known RBP	4.97	□□□□□ -1.61
FRE4	YNR060W	SSF1	P38789	453 aa	Predicted RBP	4.97	□□□□□ -1.61
FRE4	YNR060W	NOP7	P53261	605 aa	Known RBP	4.97	□□□□□ -1.61
FRE4	YNR060W	RSC30	P38781	883 aa		4.97	□□□□□ -1.61
FRE4	YNR060W	YRR1	Q12172	810 aa		4.97	□□□□□ -1.61
FRE4	YNR060W	YJU3	P28321	313 aa		4.96	□□□□□ -1.62
FRE4	YNR060W	SNU71	P53207	620 aa	Known RBP	4.96	□□□□□ -1.62
FRE4	YNR060W	RAM1	P22007	431 aa		4.95	□□□□□ -1.62
FRE4	YNR060W	ESS1	P22696	170 aa		4.95	□□□□□ -1.62
FRE4	YNR060W	SLD2	P34252	453 aa		4.95	□□□□□ -1.62
FRE4	YNR060W	PDR1	P12383	1068 aa		4.95	□□□□□ -1.62
FRE4	YNR060W	CDC3	P32457	520 aa	Known RBP	4.95	□□□□□ -1.62
FRE4	YNR060W	RRN6	P32786	894 aa		4.94	□□□□□ -1.62
FRE4	YNR060W	ERF2	Q06551	359 aa		4.94	□□□□□ -1.62
FRE4	YNR060W	MMP1	Q12372	583 aa		4.94	□□□□□ -1.62
FRE4	YNR060W	PUP1	P25043	261 aa		4.94	□□□□□ -1.62
FRE4	YNR060W	RTG2	P32608	588 aa	Known RBP	4.94	□□□□□ -1.62
FRE4	YNR060W	ARH1	P48360	493 aa		4.94	□□□□□ -1.62
FRE4	YNR060W	YML083C	Q04526	418 aa		4.94	□□□□□ -1.62
FRE4	YNR060W	YPR204W	Q08995	1032 aa		4.94	□□□□□ -1.62
FRE4	YNR060W	STR2	P47164	639 aa		4.93	□□□□□ -1.62
FRE4	YNR060W	PEX21	P50091	288 aa		4.93	□□□□□ -1.62
FRE4	YNR060W	RAD59	Q12223	238 aa		4.93	□□□□□ -1.62
FRE4	YNR060W	SUP45	P12385	437 aa	Known RBP	4.92	□□□□□ -1.62
FRE4	YNR060W	HEM3	P28789	327 aa		4.92	□□□□□ -1.62
FRE4	YNR060W	RPL34A	P87262	121 aa	Predicted RBP	4.92	□□□□□ -1.62
FRE4	YNR060W	TY1A-DR4	O74302	440 aa		4.92	□□□□□ -1.62
FRE4	YNR060W	TY1A-H	P0C2I4	478 aa	Known RBP	4.92	□□□□□ -1.62
FRE4	YNR060W	TY1A-A	P0CX57	440 aa		4.92	□□□□□ -1.62
FRE4	YNR060W	TY1A-PR1	P0CX58	440 aa		4.92	□□□□□ -1.62
FRE4	YNR060W	TY1A-OR	P0CX59	440 aa		4.92	□□□□□ -1.62
FRE4	YNR060W	TY1A-PR2	P0CX60	440 aa		4.92	□□□□□ -1.62
FRE4	YNR060W	TY1A-DR5	P0CX65	440 aa		4.92	□□□□□ -1.62
FRE4	YNR060W	TY1A-ER2	P0CX66	440 aa		4.92	□□□□□ -1.62
FRE4	YNR060W	TY1A-GR3	P0CX67	440 aa		4.92	□□□□□ -1.62
FRE4	YNR060W	TY1A-LR1	P0CX68	440 aa		4.92	□□□□□ -1.62
FRE4	YNR060W	TY1A-MR2	P0CX69	440 aa		4.92	□□□□□ -1.62
FRE4	YNR060W	NUD1	P32336	851 aa		4.92	□□□□□ -1.62
FRE4	YNR060W	YBL036C	P38197	257 aa		4.92	□□□□□ -1.62
FRE4	YNR060W	RPL34B	P40525	121 aa	Known RBP	4.92	□□□□□ -1.62
FRE4	YNR060W	TY1A-JR2	P47099	440 aa		4.92	□□□□□ -1.62
FRE4	YNR060W	RTF1	P53064	558 aa		4.92	□□□□□ -1.62
FRE4	YNR060W	HAP5	Q02516	242 aa		4.92	□□□□□ -1.62
FRE4	YNR060W	TY1A-DR1	Q03856	440 aa		4.92	□□□□□ -1.62
FRE4	YNR060W	YMR196W	Q04336	1088 aa		4.92	□□□□□ -1.62
FRE4	YNR060W	TY1A-ML1	Q04706	440 aa	Known RBP	4.92	□□□□□ -1.62
FRE4	YNR060W	TY1A-BR	Q12217	440 aa		4.92	□□□□□ -1.62
FRE4	YNR060W	TY1A-NL2	Q12470	440 aa		4.92	□□□□□ -1.62
FRE4	YNR060W	TY1A-GR2	Q12485	440 aa		4.92	□□□□□ -1.62
FRE4	YNR060W	SEC2	P17065	759 aa		4.91	□□□□□ -1.62
FRE4	YNR060W	AGE1	Q04412	482 aa		4.91	□□□□□ -1.62
FRE4	YNR060W	YPR015C	Q12531	247 aa		4.91	□□□□□ -1.62
FRE4	YNR060W	PRE3	P38624	215 aa		4.91	□□□□□ -1.62
FRE4	YNR060W	ISM1	P48526	1002 aa		4.91	□□□□□ -1.62
FRE4	YNR060W	YNL115C	P53925	644 aa		4.91	□□□□□ -1.62
FRE4	YNR060W	YNL108C	P53929	270 aa		4.91	□□□□□ -1.62
FRE4	YNR060W	PKH3	Q03306	898 aa	Predicted RBP	4.91	□□□□□ -1.62
FRE4	YNR060W	KEX2	P13134	814 aa		4.9	□□□□□ -1.62
FRE4	YNR060W	CHL1	P22516	861 aa	Predicted RBP	4.89	□□□□□ -1.63
FRE4	YNR060W	CSE4	P36012	229 aa		4.89	□□□□□ -1.63
FRE4	YNR060W	MET10	P39692	1035 aa		4.89	□□□□□ -1.63
FRE4	YNR060W	MRX10	Q05648	414 aa		4.89	□□□□□ -1.63
FRE4	YNR060W	BNI4	P53858	892 aa		4.89	□□□□□ -1.63
FRE4	YNR060W	HAT1	Q12341	374 aa		4.89	□□□□□ -1.63
FRE4	YNR060W	SLY41	P22215	453 aa		4.88	□□□□□ -1.63
FRE4	YNR060W	ELP4	Q02884	456 aa	Known RBP	4.88	□□□□□ -1.63
FRE4	YNR060W	BUD20	Q08004	166 aa	Predicted RBP	4.88	□□□□□ -1.63
FRE4	YNR060W	ENO1	P00924	437 aa	Known RBP	4.87	□□□□□ -1.63
FRE4	YNR060W	ENO2	P00925	437 aa	Known RBP	4.87	□□□□□ -1.63
FRE4	YNR060W	TRM1	P15565	570 aa	Known RBP	4.87	□□□□□ -1.63
FRE4	YNR060W	YDJ1	P25491	409 aa	Known RBP	4.86	□□□□□ -1.63
FRE4	YNR060W	BUB1	P41695	1021 aa	Known RBP RIP-Chip data	4.86	□□□□□ -1.63	not detected
FRE4	YNR060W	YTA7	P40340	1379 aa		4.85	□□□□□ -1.63
FRE4	YNR060W	MAK16	P10962	306 aa	Predicted RBP	4.85	□□□□□ -1.63
FRE4	YNR060W	ARG8	P18544	423 aa		4.85	□□□□□ -1.63
FRE4	YNR060W	SPT23	P35210	1082 aa		4.85	□□□□□ -1.63
FRE4	YNR060W	OCA5	P38738	679 aa		4.85	□□□□□ -1.63
FRE4	YNR060W	IPL1	P38991	367 aa		4.85	□□□□□ -1.63
FRE4	YNR060W	RIM21	P48565	533 aa		4.85	□□□□□ -1.63
FRE4	YNR060W	RRP15	Q06511	250 aa	Predicted RBP	4.85	□□□□□ -1.63
FRE4	YNR060W	LAM6	Q08001	693 aa		4.85	□□□□□ -1.63
FRE4	YNR060W	TGL4	P36165	910 aa		4.85	□□□□□ -1.63
FRE4	YNR060W	ALD2	P47771	506 aa		4.84	□□□□□ -1.63
FRE4	YNR060W	TUB4	P53378	473 aa		4.84	□□□□□ -1.63
FRE4	YNR060W	PEP12	P32854	288 aa		4.84	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 11.4 ms