RNA–Protein interactions for RNA: YNL236W

SIN4, Transcript of Subunit of the RNA polymerase II mediator complex, yeast

Gene SIN4, Length 2,925 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SIN4	YNL236W	STM1	P39015	273 aa	Known RBP	5.11	□□□□□ -1.59
SIN4	YNL236W	RIM21	P48565	533 aa		5.11	□□□□□ -1.59
SIN4	YNL236W	YBL113C	Q7M4S9	792 aa		5.11	□□□□□ -1.59
SIN4	YNL236W	SLY41	P22215	453 aa		5.1	□□□□□ -1.59
SIN4	YNL236W	PEX21	P50091	288 aa		5.1	□□□□□ -1.59
SIN4	YNL236W	GTT3	P39996	337 aa		5.09	□□□□□ -1.59
SIN4	YNL236W	MAK16	P10962	306 aa	Predicted RBP	5.09	□□□□□ -1.6
SIN4	YNL236W	NST1	P53935	1240 aa		5.09	□□□□□ -1.6
SIN4	YNL236W	MPH3	P0CE00	602 aa		5.08	□□□□□ -1.6
SIN4	YNL236W	SIT4	P20604	311 aa		5.08	□□□□□ -1.6
SIN4	YNL236W	ASF1	P32447	279 aa		5.08	□□□□□ -1.6
SIN4	YNL236W	TUM1	Q08686	304 aa	Known RBP	5.08	□□□□□ -1.6
SIN4	YNL236W	GAP1	P19145	602 aa	Predicted RBP	5.07	□□□□□ -1.6
SIN4	YNL236W	SLI15	P38283	698 aa		5.07	□□□□□ -1.6
SIN4	YNL236W	UBX7	P38349	436 aa		5.07	□□□□□ -1.6
SIN4	YNL236W	CDC73	Q06697	393 aa		5.07	□□□□□ -1.6
SIN4	YNL236W	AI4	P03878	556 aa		5.07	□□□□□ -1.6
SIN4	YNL236W	SEC20	P28791	383 aa		5.07	□□□□□ -1.6
SIN4	YNL236W	ERP5	P38819	212 aa		5.07	□□□□□ -1.6
SIN4	YNL236W	SET4	P42948	560 aa		5.07	□□□□□ -1.6
SIN4	YNL236W	LAM6	Q08001	693 aa		5.07	□□□□□ -1.6
SIN4	YNL236W	HTA1	P04911	132 aa	Known RBP	5.07	□□□□□ -1.6
SIN4	YNL236W	HTA2	P04912	132 aa		5.07	□□□□□ -1.6
SIN4	YNL236W	ALD2	P47771	506 aa		5.06	□□□□□ -1.6
SIN4	YNL236W	TFB4	Q12004	338 aa		5.06	□□□□□ -1.6
SIN4	YNL236W	RSC30	P38781	883 aa		5.06	□□□□□ -1.6
SIN4	YNL236W	YPP1	P46951	817 aa		5.06	□□□□□ -1.6
SIN4	YNL236W	KAR5	Q04746	504 aa		5.05	□□□□□ -1.6
SIN4	YNL236W	YOL036W	Q08206	761 aa		5.05	□□□□□ -1.6
SIN4	YNL236W	ENV9	Q08651	330 aa		5.05	□□□□□ -1.6
SIN4	YNL236W	PEP12	P32854	288 aa		5.05	□□□□□ -1.6
SIN4	YNL236W	YTA7	P40340	1379 aa		5.04	□□□□□ -1.6
SIN4	YNL236W	THI12	P42883	340 aa		5.04	□□□□□ -1.6
SIN4	YNL236W	THI5	P43534	340 aa		5.04	□□□□□ -1.6
SIN4	YNL236W	THI11	P47183	340 aa		5.04	□□□□□ -1.6
SIN4	YNL236W	THI13	Q07748	340 aa		5.04	□□□□□ -1.6
SIN4	YNL236W	ISF1	P32488	338 aa		5.04	□□□□□ -1.6
SIN4	YNL236W	GRS1	P38088	690 aa	Known RBP	5.04	□□□□□ -1.6
SIN4	YNL236W	DAN4	P47179	1161 aa		5.04	□□□□□ -1.6
SIN4	YNL236W	MCM16	Q12262	181 aa		5.04	□□□□□ -1.6
SIN4	YNL236W	TGL3	P40308	642 aa		5.03	□□□□□ -1.6
SIN4	YNL236W	POL32	P47110	350 aa		5.03	□□□□□ -1.6
SIN4	YNL236W	MSC6	Q08818	692 aa	Known RBP	5.03	□□□□□ -1.6
SIN4	YNL236W	GAL2	P13181	574 aa		5.03	□□□□□ -1.6
SIN4	YNL236W	TRM1	P15565	570 aa	Known RBP	5.03	□□□□□ -1.6
SIN4	YNL236W	RDS2	P19541	446 aa	Known RBP	5.03	□□□□□ -1.6
SIN4	YNL236W	YHL050C	P38721	697 aa		5.03	□□□□□ -1.6
SIN4	YNL236W	YHR219W	P38900	624 aa		5.03	□□□□□ -1.6
SIN4	YNL236W	YEL077C	Q3E7X8	1277 aa		5.03	□□□□□ -1.6
SIN4	YNL236W	YNL115C	P53925	644 aa		5.02	□□□□□ -1.61
SIN4	YNL236W	BRN1	P38170	754 aa		5.02	□□□□□ -1.61
SIN4	YNL236W	NAF1	P53919	492 aa	Known RBP	5.01	□□□□□ -1.61
SIN4	YNL236W	YRR1	Q12172	810 aa		5.01	□□□□□ -1.61
SIN4	YNL236W	ATE1	P16639	503 aa		5	□□□□□ -1.61
SIN4	YNL236W	TPS3	P38426	1054 aa	Known RBP	5	□□□□□ -1.61
SIN4	YNL236W	YEL023C	P39992	682 aa		5	□□□□□ -1.61
SIN4	YNL236W	TBF1	Q02457	562 aa		5	□□□□□ -1.61
SIN4	YNL236W	EMP47	P43555	445 aa		5	□□□□□ -1.61
SIN4	YNL236W	PUS6	P53294	404 aa		4.99	□□□□□ -1.61
SIN4	YNL236W	OYE2	Q03558	400 aa	Known RBP	4.99	□□□□□ -1.61
SIN4	YNL236W	OCA5	P38738	679 aa		4.99	□□□□□ -1.61
SIN4	YNL236W	JIP5	Q06214	492 aa	Predicted RBP	4.99	□□□□□ -1.61
SIN4	YNL236W	MDJ2	P42834	146 aa		4.98	□□□□□ -1.61
SIN4	YNL236W	KEX2	P13134	814 aa		4.98	□□□□□ -1.61
SIN4	YNL236W	BUB1	P41695	1021 aa	Known RBP RIP-Chip data	4.98	□□□□□ -1.61	not detected
SIN4	YNL236W	TRL1	P09880	827 aa	Known RBP	4.97	□□□□□ -1.61
SIN4	YNL236W	RTF1	P53064	558 aa		4.97	□□□□□ -1.61
SIN4	YNL236W	CWC15	Q03772	175 aa	Known RBP	4.97	□□□□□ -1.61
SIN4	YNL236W	RRP15	Q06511	250 aa	Predicted RBP	4.97	□□□□□ -1.61
SIN4	YNL236W	SEC8	P32855	1065 aa		4.97	□□□□□ -1.61
SIN4	YNL236W	ALD4	P46367	519 aa	Known RBP	4.97	□□□□□ -1.61
SIN4	YNL236W	NNF1	P47149	201 aa		4.96	□□□□□ -1.61
SIN4	YNL236W	WHI5	Q12416	295 aa		4.96	□□□□□ -1.61
SIN4	YNL236W	PNP1	Q05788	311 aa		4.96	□□□□□ -1.62
SIN4	YNL236W	ERF2	Q06551	359 aa		4.96	□□□□□ -1.62
SIN4	YNL236W	PUN1	Q06991	263 aa		4.96	□□□□□ -1.62
SIN4	YNL236W	SPC42	P36094	363 aa		4.95	□□□□□ -1.62
SIN4	YNL236W	PHO87	P25360	923 aa		4.94	□□□□□ -1.62
SIN4	YNL236W	MGE1	P38523	228 aa		4.94	□□□□□ -1.62
SIN4	YNL236W	GLO3	P38682	493 aa	Known RBP	4.94	□□□□□ -1.62
SIN4	YNL236W	PPX1	P38698	397 aa		4.94	□□□□□ -1.62
SIN4	YNL236W	PUF6	Q04373	656 aa	Known RBP	4.94	□□□□□ -1.62
SIN4	YNL236W	DPL1	Q05567	589 aa		4.94	□□□□□ -1.62
SIN4	YNL236W	YDL206W	Q12424	762 aa		4.94	□□□□□ -1.62
SIN4	YNL236W	FUR4	P05316	633 aa	Known RBP	4.94	□□□□□ -1.62
SIN4	YNL236W	SVF1	Q05515	481 aa		4.94	□□□□□ -1.62
SIN4	YNL236W	PTC4	P38089	393 aa		4.93	□□□□□ -1.62
SIN4	YNL236W	BOL3	P39724	118 aa		4.93	□□□□□ -1.62
SIN4	YNL236W	ACS2	P52910	683 aa	Known RBP	4.93	□□□□□ -1.62
SIN4	YNL236W	WSC3	Q12215	556 aa		4.93	□□□□□ -1.62
SIN4	YNL236W	MST1	P07236	462 aa		4.93	□□□□□ -1.62
SIN4	YNL236W	STE20	Q03497	939 aa	Known RBP	4.93	□□□□□ -1.62
SIN4	YNL236W	FPR4	Q06205	392 aa	Predicted RBP	4.93	□□□□□ -1.62
SIN4	YNL236W	HAP4	P14064	554 aa		4.93	□□□□□ -1.62
SIN4	YNL236W	NUD1	P32336	851 aa		4.93	□□□□□ -1.62
SIN4	YNL236W	SOH1	P38633	127 aa		4.93	□□□□□ -1.62
SIN4	YNL236W	ATG3	P40344	310 aa		4.93	□□□□□ -1.62
SIN4	YNL236W	CST6	P40535	587 aa		4.93	□□□□□ -1.62
SIN4	YNL236W	MID1	P41821	548 aa		4.93	□□□□□ -1.62
SIN4	YNL236W	ATG1	P53104	897 aa		4.93	□□□□□ -1.62

Retrieved 100 of 5,963 RNA–protein pairs in 39.1 ms