RNA–Protein interactions for RNA: YLR411W

CTR3, Transcript of High-affinity copper transporter of the plasma membrane, yeastyeast

Gene CTR3, Length 726 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CTR3YLR411W BUD20Q08004 166 aaPredicted RBP9.22□□□□□ -0.93
CTR3YLR411W KTR1P27810 393 aaKnown RBP9.21□□□□□ -0.94
CTR3YLR411W RTF1P53064 558 aa9.21□□□□□ -0.94
CTR3YLR411W YNL115CP53925 644 aa9.2□□□□□ -0.94
CTR3YLR411W ERF2Q06551 359 aa9.2□□□□□ -0.94
CTR3YLR411W TYW1Q08960 810 aaKnown RBP9.2□□□□□ -0.94
CTR3YLR411W SCJ1P25303 377 aa9.19□□□□□ -0.94
CTR3YLR411W GLN1P32288 370 aaKnown RBP9.19□□□□□ -0.94
CTR3YLR411W TY1A-DR4O74302 440 aa9.18□□□□□ -0.94
CTR3YLR411W TY1A-HP0C2I4 478 aaKnown RBP9.18□□□□□ -0.94
CTR3YLR411W TY1A-AP0CX57 440 aa9.18□□□□□ -0.94
CTR3YLR411W TY1A-PR1P0CX58 440 aa9.18□□□□□ -0.94
CTR3YLR411W TY1A-ORP0CX59 440 aa9.18□□□□□ -0.94
CTR3YLR411W TY1A-PR2P0CX60 440 aa9.18□□□□□ -0.94
CTR3YLR411W TY1A-DR5P0CX65 440 aa9.18□□□□□ -0.94
CTR3YLR411W TY1A-ER2P0CX66 440 aa9.18□□□□□ -0.94
CTR3YLR411W TY1A-GR3P0CX67 440 aa9.18□□□□□ -0.94
CTR3YLR411W TY1A-LR1P0CX68 440 aa9.18□□□□□ -0.94
CTR3YLR411W TY1A-MR2P0CX69 440 aa9.18□□□□□ -0.94
CTR3YLR411W VRP1P37370 817 aa9.18□□□□□ -0.94
CTR3YLR411W TY1A-JR2P47099 440 aa9.18□□□□□ -0.94
CTR3YLR411W TY1A-DR1Q03856 440 aa9.18□□□□□ -0.94
CTR3YLR411W TY1A-ML1Q04706 440 aaKnown RBP9.18□□□□□ -0.94
CTR3YLR411W TY1A-BRQ12217 440 aa9.18□□□□□ -0.94
CTR3YLR411W MMP1Q12372 583 aa9.18□□□□□ -0.94
CTR3YLR411W TY1A-NL2Q12470 440 aa9.18□□□□□ -0.94
CTR3YLR411W TY1A-GR2Q12485 440 aa9.18□□□□□ -0.94
CTR3YLR411W SSA2P10592 639 aaKnown RBP9.17□□□□□ -0.94
CTR3YLR411W GCD11P32481 527 aaKnown RBP9.17□□□□□ -0.94
CTR3YLR411W HPC2Q01448 625 aa9.17□□□□□ -0.94
CTR3YLR411W SEC2P17065 759 aa9.16□□□□□ -0.94
CTR3YLR411W BCK2P33306 851 aa9.16□□□□□ -0.94
CTR3YLR411W PRT1P06103 763 aaKnown RBP9.15□□□□□ -0.94
CTR3YLR411W SLY41P22215 453 aa9.14□□□□□ -0.95
CTR3YLR411W ESS1P22696 170 aa9.14□□□□□ -0.95
CTR3YLR411W DMA2P53924 522 aa9.12□□□□□ -0.95
CTR3YLR411W YJU3P28321 313 aa9.1□□□□□ -0.95
CTR3YLR411W GYP1Q08484 637 aa9.1□□□□□ -0.95
CTR3YLR411W PKH3Q03306 898 aaPredicted RBP9.09□□□□□ -0.95
CTR3YLR411W SAS4Q04003 481 aa9.09□□□□□ -0.95
CTR3YLR411W AGE1Q04412 482 aa9.09□□□□□ -0.95
CTR3YLR411W TFB3Q03290 321 aa9.08□□□□□ -0.96
CTR3YLR411W TUB4P53378 473 aa9.07□□□□□ -0.96
CTR3YLR411W BRL1P38770 471 aa9.05□□□□□ -0.96
CTR3YLR411W XDJ1P39102 459 aa9.05□□□□□ -0.96
CTR3YLR411W BUB1P41695 1021 aaKnown RBP RIP-Chip data9.05□□□□□ -0.96not detected
CTR3YLR411W PUS6P53294 404 aa9.05□□□□□ -0.96
CTR3YLR411W RAD59Q12223 238 aa9.05□□□□□ -0.96
CTR3YLR411W TRM1P15565 570 aaKnown RBP9.04□□□□□ -0.96
CTR3YLR411W RSC30P38781 883 aa9.04□□□□□ -0.96
CTR3YLR411W RRN7P40992 514 aa9.04□□□□□ -0.96
CTR3YLR411W HGH1P48362 394 aaKnown RBP9.04□□□□□ -0.96
CTR3YLR411W LAM6Q08001 693 aa9.04□□□□□ -0.96
CTR3YLR411W ARG8P18544 423 aa9.02□□□□□ -0.97
CTR3YLR411W PAT1P25644 796 aaKnown RBP9.02□□□□□ -0.97
CTR3YLR411W PAC1P39946 494 aaKnown RBP9.02□□□□□ -0.97
CTR3YLR411W SPT16P32558 1035 aaKnown RBP9.01□□□□□ -0.97
CTR3YLR411W PKC1P24583 1151 aa9□□□□□ -0.97
CTR3YLR411W SDH2P21801 266 aa8.99□□□□□ -0.97
CTR3YLR411W TBF1Q02457 562 aa8.99□□□□□ -0.97
CTR3YLR411W MRF1P30775 413 aaPredicted RBP8.97□□□□□ -0.97
CTR3YLR411W YDL206WQ12424 762 aa8.96□□□□□ -0.98
CTR3YLR411W RPA14P50106 137 aa8.95□□□□□ -0.98
CTR3YLR411W YBL036CP38197 257 aa8.93□□□□□ -0.98
CTR3YLR411W PDC1P06169 563 aaKnown RBP8.92□□□□□ -0.98
CTR3YLR411W ERG12P07277 443 aa8.92□□□□□ -0.98
CTR3YLR411W CSE4P36012 229 aa8.92□□□□□ -0.98
CTR3YLR411W KXD1P53158 218 aa8.92□□□□□ -0.98
CTR3YLR411W YPR097WQ06839 1073 aa8.92□□□□□ -0.98
CTR3YLR411W MOD5P07884 428 aa8.91□□□□□ -0.98
CTR3YLR411W MAK16P10962 306 aaPredicted RBP8.9□□□□□ -0.98
CTR3YLR411W ALR1Q08269 859 aa8.9□□□□□ -0.98
CTR3YLR411W TPD3P31383 635 aa8.88□□□□□ -0.99
CTR3YLR411W HXT10P43581 546 aa8.88□□□□□ -0.99
CTR3YLR411W YEL077CQ3E7X8 1277 aa8.87□□□□□ -0.99
CTR3YLR411W CST6P40535 587 aa8.86□□□□□ -0.99
CTR3YLR411W YJL007CP47080 104 aa8.86□□□□□ -0.99
CTR3YLR411W AMS1P22855 1083 aa8.85□□□□□ -0.99
CTR3YLR411W BIO2P32451 375 aa8.85□□□□□ -0.99
CTR3YLR411W RRD1P40454 393 aaKnown RBP8.85□□□□□ -0.99
CTR3YLR411W BIM1P40013 344 aa8.84□□□□□ -0.99
CTR3YLR411W BDP1P46678 594 aa8.84□□□□□ -0.99
CTR3YLR411W TAF7Q05021 590 aa8.83□□□□□ -1
CTR3YLR411W SPT5P27692 1063 aaKnown RBP8.82□□□□□ -1
CTR3YLR411W NAF1P53919 492 aaKnown RBP8.81□□□□□ -1
CTR3YLR411W FRK1Q03002 865 aaPredicted RBP8.81□□□□□ -1
CTR3YLR411W RAS1P01119 309 aa8.8□□□□□ -1
CTR3YLR411W ATG32P40458 529 aa8.8□□□□□ -1
CTR3YLR411W DPS1P04802 557 aaKnown RBP8.78□□□□□ -1
CTR3YLR411W SUP45P12385 437 aaKnown RBP8.78□□□□□ -1
CTR3YLR411W YDJ1P25491 409 aaKnown RBP8.78□□□□□ -1
CTR3YLR411W FIG4P42837 879 aa8.78□□□□□ -1
CTR3YLR411W YNL108CP53929 270 aa8.78□□□□□ -1
CTR3YLR411W PUS5Q06244 254 aa8.77□□□□□ -1.01
CTR3YLR411W VAC17P25591 423 aa8.76□□□□□ -1.01
CTR3YLR411W TIF1P10081 395 aaKnown RBP8.75□□□□□ -1.01
CTR3YLR411W TEC1P18412 486 aa8.75□□□□□ -1.01
CTR3YLR411W YPR084WQ06821 456 aa8.73□□□□□ -1.01
CTR3YLR411W RLF2Q12495 606 aa8.73□□□□□ -1.01
CTR3YLR411W ENO2P00925 437 aaKnown RBP8.72□□□□□ -1.01
Retrieved 100 of 5,963 RNA–protein pairs in 8.5 ms