RNA–Protein interactions for RNA: YLR114C

AVL9, Transcript of Conserved protein involved in exocytic transport from the Golgi, yeastyeast

Gene AVL9, Length 2,295 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
AVL9YLR114C TRK1P12685 1235 aa9.63□□□□□ -0.87
AVL9YLR114C NAP1P25293 417 aaKnown RBP9.62□□□□□ -0.87
AVL9YLR114C FUN12P39730 1002 aaKnown RBP9.62□□□□□ -0.87
AVL9YLR114C HAP1P0CE41 1502 aa9.62□□□□□ -0.87
AVL9YLR114C YDL144CQ07589 356 aa9.62□□□□□ -0.87
AVL9YLR114C YRB30P53107 440 aaPredicted RBP9.61□□□□□ -0.87
AVL9YLR114C YML133CQ03099 1374 aa9.59□□□□□ -0.87
AVL9YLR114C YLL067CQ07888 1374 aa9.59□□□□□ -0.87
AVL9YLR114C YLL066CQ99208 1374 aa9.59□□□□□ -0.87
AVL9YLR114C SUI2P20459 304 aaKnown RBP9.56□□□□□ -0.88
AVL9YLR114C FPR3P38911 411 aaKnown RBP9.53□□□□□ -0.88
AVL9YLR114C MPP10P47083 593 aaKnown RBP9.53□□□□□ -0.88
AVL9YLR114C RRP46P53256 223 aaPredicted RBP9.53□□□□□ -0.88
AVL9YLR114C RPC31P17890 251 aa9.53□□□□□ -0.88
AVL9YLR114C NAB6Q03735 1134 aaKnown RBP RIP-Chip data9.52□□□□□ -0.89not detected
AVL9YLR114C SNF2P22082 1703 aa9.52□□□□□ -0.89
AVL9YLR114C PSK1P31374 1356 aa9.51□□□□□ -0.89
AVL9YLR114C MRX12P47084 519 aa9.51□□□□□ -0.89
AVL9YLR114C KRE5P22023 1365 aa9.5□□□□□ -0.89
AVL9YLR114C RCM1P53972 490 aa9.49□□□□□ -0.89
AVL9YLR114C TAP42Q04372 366 aa9.49□□□□□ -0.89
AVL9YLR114C RTR1P40084 226 aaPredicted RBP9.49□□□□□ -0.89
AVL9YLR114C PPH3P32345 308 aa9.48□□□□□ -0.89
AVL9YLR114C KAR2P16474 682 aaKnown RBP9.47□□□□□ -0.89
AVL9YLR114C SAP155P43612 1002 aa9.47□□□□□ -0.89
AVL9YLR114C PDI1P17967 522 aaKnown RBP9.45□□□□□ -0.9
AVL9YLR114C PRD1P25375 712 aa9.45□□□□□ -0.9
AVL9YLR114C IME2P32581 645 aa9.45□□□□□ -0.9
AVL9YLR114C RIA1P53893 1110 aa9.45□□□□□ -0.9
AVL9YLR114C LEU2P04173 364 aaPredicted RBP9.44□□□□□ -0.9
AVL9YLR114C OPY1P38271 328 aa9.44□□□□□ -0.9
AVL9YLR114C ABP1P15891 592 aaKnown RBP9.44□□□□□ -0.9
AVL9YLR114C THI22Q06490 572 aa9.44□□□□□ -0.9
AVL9YLR114C HIM1Q06674 414 aa9.43□□□□□ -0.9
AVL9YLR114C RAD2P07276 1031 aa9.43□□□□□ -0.9
AVL9YLR114C CPS1P27614 576 aa9.43□□□□□ -0.9
AVL9YLR114C AUS1Q08409 1394 aa9.42□□□□□ -0.9
AVL9YLR114C GRX4P32642 244 aa9.42□□□□□ -0.9
AVL9YLR114C DNF3Q12674 1656 aa9.42□□□□□ -0.9
AVL9YLR114C TPD3P31383 635 aa9.41□□□□□ -0.9
AVL9YLR114C MTR4P47047 1073 aaKnown RBP9.41□□□□□ -0.9
AVL9YLR114C HEF3P53978 1044 aaKnown RBP9.41□□□□□ -0.9
AVL9YLR114C PAP2P53632 584 aaKnown RBP9.4□□□□□ -0.9
AVL9YLR114C YIL092WP40497 633 aa9.39□□□□□ -0.91
AVL9YLR114C YIR014WP40570 242 aa9.39□□□□□ -0.91
AVL9YLR114C RTF1P53064 558 aa9.39□□□□□ -0.91
AVL9YLR114C BUD27P43573 796 aaKnown RBP RIP-Chip data9.38□□□□□ -0.91not detected
AVL9YLR114C MAK10Q02197 733 aa9.38□□□□□ -0.91
AVL9YLR114C YFR016CP43597 1233 aaKnown RBP9.37□□□□□ -0.91
AVL9YLR114C YNR029CP53729 429 aaKnown RBP9.37□□□□□ -0.91
AVL9YLR114C SIR4P11978 1358 aa9.36□□□□□ -0.91
AVL9YLR114C DAL5P15365 543 aa9.36□□□□□ -0.91
AVL9YLR114C RTT109Q07794 436 aa9.36□□□□□ -0.91
AVL9YLR114C CSE4P36012 229 aa9.35□□□□□ -0.91
AVL9YLR114C POL32P47110 350 aa9.34□□□□□ -0.91
AVL9YLR114C PRP43P53131 767 aaKnown RBP9.34□□□□□ -0.91
AVL9YLR114C MAK21Q12176 1025 aaKnown RBP9.33□□□□□ -0.92
AVL9YLR114C RPO41P13433 1351 aaKnown RBP9.33□□□□□ -0.92
AVL9YLR114C YRF1-4O13559 1382 aa9.32□□□□□ -0.92
AVL9YLR114C ADE6P38972 1358 aaKnown RBP9.32□□□□□ -0.92
AVL9YLR114C USO1P25386 1790 aa9.32□□□□□ -0.92
AVL9YLR114C RPS24AP0CX31 135 aaKnown RBP9.31□□□□□ -0.92
AVL9YLR114C RPS24BP0CX32 135 aaKnown RBP9.31□□□□□ -0.92
AVL9YLR114C GAS4Q08271 471 aa9.3□□□□□ -0.92
AVL9YLR114C CLC1P17891 233 aa9.29□□□□□ -0.92
AVL9YLR114C EAF7P53911 425 aaKnown RBP9.28□□□□□ -0.92
AVL9YLR114C AKL1P38080 1108 aaKnown RBP9.28□□□□□ -0.92
AVL9YLR114C PUF6Q04373 656 aaKnown RBP9.28□□□□□ -0.92
AVL9YLR114C APC1P53886 1748 aa9.27□□□□□ -0.93
AVL9YLR114C DPS1P04802 557 aaKnown RBP9.26□□□□□ -0.93
AVL9YLR114C BUB1P41695 1021 aaKnown RBP RIP-Chip data9.26□□□□□ -0.93not detected
AVL9YLR114C TY1B-NL2Q99337 1749 aaKnown RBP9.26□□□□□ -0.93
AVL9YLR114C YNL050CP53952 270 aa9.25□□□□□ -0.93
AVL9YLR114C DSD1P53095 428 aa9.24□□□□□ -0.93
AVL9YLR114C SNF7P39929 240 aaKnown RBP9.24□□□□□ -0.93
AVL9YLR114C GYP7P48365 746 aa9.24□□□□□ -0.93
AVL9YLR114C PCT1P13259 424 aa9.22□□□□□ -0.93
AVL9YLR114C TRP5P00931 707 aaKnown RBP9.22□□□□□ -0.93
AVL9YLR114C YPR148CQ06523 435 aa9.22□□□□□ -0.93
AVL9YLR114C ZDS1P50111 915 aaKnown RBP9.21□□□□□ -0.93
AVL9YLR114C NTH2P35172 780 aa9.21□□□□□ -0.94
AVL9YLR114C MAM1P40065 302 aa9.21□□□□□ -0.94
AVL9YLR114C RRT14P40470 206 aa9.21□□□□□ -0.94
AVL9YLR114C SRT1Q03175 343 aa9.2□□□□□ -0.94
AVL9YLR114C ROX1P25042 368 aa9.19□□□□□ -0.94
AVL9YLR114C EDE1P34216 1381 aa9.18□□□□□ -0.94
AVL9YLR114C ECM16Q04217 1267 aaKnown RBP9.17□□□□□ -0.94
AVL9YLR114C ILV3P39522 585 aaKnown RBP9.17□□□□□ -0.94
AVL9YLR114C YRF1-2P40105 1681 aa9.17□□□□□ -0.94
AVL9YLR114C TY4B-HP0C2J7 1802 aa9.16□□□□□ -0.94
AVL9YLR114C TY4B-JP47024 1803 aa9.16□□□□□ -0.94
AVL9YLR114C YMR196WQ04336 1088 aa9.16□□□□□ -0.94
AVL9YLR114C HSP104P31539 908 aaKnown RBP9.15□□□□□ -0.95
AVL9YLR114C VPS24P36095 224 aaKnown RBP9.15□□□□□ -0.95
AVL9YLR114C YIL177CP40434 1758 aa9.15□□□□□ -0.95
AVL9YLR114C YJL225CP40889 1758 aa9.15□□□□□ -0.95
AVL9YLR114C YPP1P46951 817 aa9.15□□□□□ -0.95
AVL9YLR114C RRP5Q05022 1729 aaKnown RBP9.15□□□□□ -0.95
AVL9YLR114C BMS1Q08965 1183 aaKnown RBP9.15□□□□□ -0.95
AVL9YLR114C RPS19AP07280 144 aaKnown RBP9.14□□□□□ -0.95
Retrieved 100 of 5,963 RNA–protein pairs in 40.4 ms