RNA–Protein interactions for RNA: YLR071C

RGR1, Transcript of Subunit of the RNA polymerase II mediator complex, yeastyeast

Gene RGR1, Length 3,249 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RGR1YLR071C RPL34AP87262 121 aaPredicted RBP3.75□□□□□ -1.81
RGR1YLR071C PDR5P33302 1511 aaKnown RBP3.74□□□□□ -1.81
RGR1YLR071C CDC3P32457 520 aaKnown RBP3.74□□□□□ -1.81
RGR1YLR071C RTS3P53289 263 aa3.74□□□□□ -1.81
RGR1YLR071C VTH1P40438 1549 aa3.74□□□□□ -1.81
RGR1YLR071C VTH2P40890 1549 aa3.74□□□□□ -1.81
RGR1YLR071C GDB1Q06625 1536 aa3.74□□□□□ -1.81
RGR1YLR071C ASF1P32447 279 aa3.74□□□□□ -1.81
RGR1YLR071C NUP42P49686 430 aaKnown RBP3.74□□□□□ -1.81
RGR1YLR071C YCK3P39962 524 aa3.74□□□□□ -1.81
RGR1YLR071C SPC42P36094 363 aa3.73□□□□□ -1.81
RGR1YLR071C FAR11P53917 953 aa3.73□□□□□ -1.81
RGR1YLR071C VPS15P22219 1454 aa3.73□□□□□ -1.81
RGR1YLR071C IQG1Q12280 1495 aa3.73□□□□□ -1.81
RGR1YLR071C BIM1P40013 344 aa3.73□□□□□ -1.81
RGR1YLR071C VPS72Q03388 795 aa3.73□□□□□ -1.81
RGR1YLR071C AI2P03876 854 aa3.72□□□□□ -1.81
RGR1YLR071C YOR093CQ12275 1648 aa3.72□□□□□ -1.81
RGR1YLR071C SSF1P38789 453 aaPredicted RBP3.72□□□□□ -1.81
RGR1YLR071C RPL34BP40525 121 aaKnown RBP3.72□□□□□ -1.81
RGR1YLR071C REF2P42073 533 aaPredicted RBP3.72□□□□□ -1.81
RGR1YLR071C YJL007CP47080 104 aa3.72□□□□□ -1.81
RGR1YLR071C PKC1P24583 1151 aa3.72□□□□□ -1.81
RGR1YLR071C SSA2P10592 639 aaKnown RBP3.71□□□□□ -1.82
RGR1YLR071C FPR4Q06205 392 aaPredicted RBP3.71□□□□□ -1.82
RGR1YLR071C MRPL32P25348 183 aa3.71□□□□□ -1.82
RGR1YLR071C SWE1P32944 819 aa3.7□□□□□ -1.82
RGR1YLR071C OCA5P38738 679 aa3.7□□□□□ -1.82
RGR1YLR071C ITT1Q04638 464 aa3.7□□□□□ -1.82
RGR1YLR071C MAK11P20484 414 aaKnown RBP3.7□□□□□ -1.82
RGR1YLR071C SEN54Q02825 467 aaPredicted RBP3.7□□□□□ -1.82
RGR1YLR071C TY3B-GQ99315 1547 aa3.7□□□□□ -1.82
RGR1YLR071C GLN1P32288 370 aaKnown RBP3.7□□□□□ -1.82
RGR1YLR071C ATG32P40458 529 aa3.7□□□□□ -1.82
RGR1YLR071C GEA2P39993 1459 aaKnown RBP3.69□□□□□ -1.82
RGR1YLR071C YKR023WP36119 530 aaKnown RBP3.69□□□□□ -1.82
RGR1YLR071C ATG36P46983 293 aa3.69□□□□□ -1.82
RGR1YLR071C LAM6Q08001 693 aa3.69□□□□□ -1.82
RGR1YLR071C YAF9P53930 226 aa3.69□□□□□ -1.82
RGR1YLR071C CPS1P27614 576 aa3.68□□□□□ -1.82
RGR1YLR071C NMD2P38798 1089 aaKnown RBP3.68□□□□□ -1.82
RGR1YLR071C YJR008WP47085 338 aa3.68□□□□□ -1.82
RGR1YLR071C BBC1P47068 1157 aa3.68□□□□□ -1.82
RGR1YLR071C NNF1P47149 201 aa3.68□□□□□ -1.82
RGR1YLR071C HAT1Q12341 374 aa3.67□□□□□ -1.82
RGR1YLR071C OSW7P43611 510 aa3.67□□□□□ -1.82
RGR1YLR071C ARO1P08566 1588 aaKnown RBP3.67□□□□□ -1.82
RGR1YLR071C CSN12P47130 423 aa3.66□□□□□ -1.82
RGR1YLR071C TIF1P10081 395 aaKnown RBP3.66□□□□□ -1.82
RGR1YLR071C TTI1P36097 1038 aa3.66□□□□□ -1.82
RGR1YLR071C RCR1P38212 213 aa3.66□□□□□ -1.82
RGR1YLR071C ALD4P46367 519 aaKnown RBP3.66□□□□□ -1.82
RGR1YLR071C YPR204WQ08995 1032 aa3.66□□□□□ -1.82
RGR1YLR071C GIN4Q12263 1142 aa3.66□□□□□ -1.82
RGR1YLR071C COX6P00427 148 aa3.65□□□□□ -1.82
RGR1YLR071C NOB1Q08444 459 aaKnown RBP3.65□□□□□ -1.82
RGR1YLR071C NOP53Q12080 455 aaKnown RBP3.65□□□□□ -1.82
RGR1YLR071C ERG12P07277 443 aa3.65□□□□□ -1.83
RGR1YLR071C KEX1P09620 729 aa3.65□□□□□ -1.83
RGR1YLR071C MRM1P25270 412 aa3.65□□□□□ -1.83
RGR1YLR071C COQ8P27697 501 aa3.65□□□□□ -1.83
RGR1YLR071C STM1P39015 273 aaKnown RBP3.65□□□□□ -1.83
RGR1YLR071C GCN2P15442 1659 aa3.65□□□□□ -1.83
RGR1YLR071C RTG3P38165 486 aa3.65□□□□□ -1.83
RGR1YLR071C SPP41P38904 1435 aa3.64□□□□□ -1.83
RGR1YLR071C SEC20P28791 383 aa3.64□□□□□ -1.83
RGR1YLR071C NAB3P38996 802 aaKnown RBP RIP-Chip data3.64□□□□□ -1.83not detected
RGR1YLR071C NUP159P40477 1460 aa3.64□□□□□ -1.83
RGR1YLR071C HOP09932 586 aa3.63□□□□□ -1.83
RGR1YLR071C TSC11P40061 1430 aa3.63□□□□□ -1.83
RGR1YLR071C DNF3Q12674 1656 aa3.63□□□□□ -1.83
RGR1YLR071C YBL036CP38197 257 aa3.63□□□□□ -1.83
RGR1YLR071C CAT8P39113 1433 aa3.63□□□□□ -1.83
RGR1YLR071C CST6P40535 587 aa3.63□□□□□ -1.83
RGR1YLR071C SVF1Q05515 481 aa3.63□□□□□ -1.83
RGR1YLR071C TFC8Q12308 588 aa3.63□□□□□ -1.83
RGR1YLR071C TY1B-NL2Q99337 1749 aaKnown RBP3.63□□□□□ -1.83
RGR1YLR071C RTG2P32608 588 aaKnown RBP3.63□□□□□ -1.83
RGR1YLR071C RRP14P36080 434 aaKnown RBP3.62□□□□□ -1.83
RGR1YLR071C MDG1P53885 366 aa3.62□□□□□ -1.83
RGR1YLR071C UBX5Q06682 500 aa3.62□□□□□ -1.83
RGR1YLR071C BUD21Q08492 214 aaPredicted RBP3.62□□□□□ -1.83
RGR1YLR071C TOM20P35180 183 aa3.62□□□□□ -1.83
RGR1YLR071C MNN4P36044 1178 aa3.61□□□□□ -1.83
RGR1YLR071C IPL1P38991 367 aa3.61□□□□□ -1.83
RGR1YLR071C TPO2P53283 614 aa3.61□□□□□ -1.83
RGR1YLR071C RNH70P53331 553 aa3.61□□□□□ -1.83
RGR1YLR071C UBP14P38237 781 aaKnown RBP3.61□□□□□ -1.83
RGR1YLR071C FPR3P38911 411 aaKnown RBP3.61□□□□□ -1.83
RGR1YLR071C ALD2P47771 506 aa3.61□□□□□ -1.83
RGR1YLR071C TRM732Q03496 1420 aa3.6□□□□□ -1.83
RGR1YLR071C YML083CQ04526 418 aa3.6□□□□□ -1.83
RGR1YLR071C SIS2P36024 562 aa3.6□□□□□ -1.83
RGR1YLR071C PUP1P25043 261 aa3.59□□□□□ -1.83
RGR1YLR071C BIO2P32451 375 aa3.59□□□□□ -1.83
RGR1YLR071C PPG1P32838 368 aa3.59□□□□□ -1.83
RGR1YLR071C PDR15Q04182 1529 aaKnown RBP3.59□□□□□ -1.83
RGR1YLR071C PDR1P12383 1068 aa3.59□□□□□ -1.83
RGR1YLR071C YOL098CQ12496 1037 aa3.59□□□□□ -1.83
RGR1YLR071C MAK16P10962 306 aaPredicted RBP3.59□□□□□ -1.84
Retrieved 100 of 5,963 RNA–protein pairs in 11.7 ms