RNA–Protein interactions for RNA: YLR062C

BUD28, Transcript of Dubious open reading frame, yeastyeast

Gene BUD28, Length 378 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BUD28YLR062C YAH1Q12184 172 aaKnown RBP7.25□□□□□ -1.25
BUD28YLR062C RAD9P14737 1309 aa7.25□□□□□ -1.25
BUD28YLR062C PTP3P40048 928 aa7.24□□□□□ -1.25
BUD28YLR062C ALD4P46367 519 aaKnown RBP7.23□□□□□ -1.25
BUD28YLR062C CAB1Q04430 367 aa7.23□□□□□ -1.25
BUD28YLR062C TY3B-IQ7LHG5 1498 aaKnown RBP7.21□□□□□ -1.26
BUD28YLR062C HOP09932 586 aa7.19□□□□□ -1.26
BUD28YLR062C APP1P53933 587 aa7.19□□□□□ -1.26
BUD28YLR062C RRP5Q05022 1729 aaKnown RBP7.18□□□□□ -1.26
BUD28YLR062C NOP7P53261 605 aaKnown RBP7.18□□□□□ -1.26
BUD28YLR062C YRF1-2P40105 1681 aa7.18□□□□□ -1.26
BUD28YLR062C TY4B-HP0C2J7 1802 aa7.17□□□□□ -1.26
BUD28YLR062C TY4B-JP47024 1803 aa7.17□□□□□ -1.26
BUD28YLR062C CDC27P38042 758 aa7.16□□□□□ -1.26
BUD28YLR062C GLN1P32288 370 aaKnown RBP7.15□□□□□ -1.26
BUD28YLR062C YIL055CP40523 627 aaKnown RBP7.15□□□□□ -1.26
BUD28YLR062C TFC8Q12308 588 aa7.15□□□□□ -1.26
BUD28YLR062C DCD1P06773 312 aa7.14□□□□□ -1.27
BUD28YLR062C OXP1P28273 1286 aa7.13□□□□□ -1.27
BUD28YLR062C ESL2P36168 1195 aa7.12□□□□□ -1.27
BUD28YLR062C TAF8Q03750 510 aa7.11□□□□□ -1.27
BUD28YLR062C ENT1Q12518 454 aa7.11□□□□□ -1.27
BUD28YLR062C CPS1P27614 576 aa7.1□□□□□ -1.27
BUD28YLR062C TAF5P38129 798 aa7.1□□□□□ -1.27
BUD28YLR062C NAP1P25293 417 aaKnown RBP7.09□□□□□ -1.27
BUD28YLR062C ENV9Q08651 330 aa7.09□□□□□ -1.27
BUD28YLR062C RCM1P53972 490 aa7.08□□□□□ -1.28
BUD28YLR062C PPH3P32345 308 aa7.06□□□□□ -1.28
BUD28YLR062C URB1P34241 1764 aaKnown RBP7.05□□□□□ -1.28
BUD28YLR062C SSP1P38871 571 aa7.05□□□□□ -1.28
BUD28YLR062C PRP45P28004 379 aaPredicted RBP7.04□□□□□ -1.28
BUD28YLR062C YMR074CQ04773 145 aa7.04□□□□□ -1.28
BUD28YLR062C IMH1Q06704 911 aaKnown RBP7.04□□□□□ -1.28
BUD28YLR062C FKS3Q04952 1785 aa7.04□□□□□ -1.28
BUD28YLR062C PSK1P31374 1356 aa7.03□□□□□ -1.28
BUD28YLR062C ADE6P38972 1358 aaKnown RBP7.03□□□□□ -1.28
BUD28YLR062C YIL177CP40434 1758 aa7.03□□□□□ -1.28
BUD28YLR062C YJL225CP40889 1758 aa7.03□□□□□ -1.28
BUD28YLR062C YRF1-3P0CX14 1859 aa7.01□□□□□ -1.29
BUD28YLR062C YRF1-7P0CX15 1859 aa7.01□□□□□ -1.29
BUD28YLR062C YRF1-6P53819 1859 aa7.01□□□□□ -1.29
BUD28YLR062C SPE2P21182 396 aa7.01□□□□□ -1.29
BUD28YLR062C PRP5P21372 849 aaPredicted RBP7□□□□□ -1.29
BUD28YLR062C KIP3P53086 805 aaKnown RBP7□□□□□ -1.29
BUD28YLR062C YGL015CP33199 130 aa6.99□□□□□ -1.29
BUD28YLR062C ARP8Q12386 881 aaKnown RBP RIP-Chip data6.99□□□□□ -1.29not detected
BUD28YLR062C MLP1Q02455 1875 aaKnown RBP6.98□□□□□ -1.29
BUD28YLR062C RSM7P47150 247 aa6.97□□□□□ -1.29
BUD28YLR062C MSB3P48566 633 aaPredicted RBP6.97□□□□□ -1.29
BUD28YLR062C YLR419WQ06698 1435 aaKnown RBP6.97□□□□□ -1.29
BUD28YLR062C BUD31P25337 157 aaPredicted RBP6.95□□□□□ -1.3
BUD28YLR062C CHZ1P40019 153 aaPredicted RBP6.95□□□□□ -1.3
BUD28YLR062C PRP43P53131 767 aaKnown RBP6.95□□□□□ -1.3
BUD28YLR062C APC1P53886 1748 aa6.94□□□□□ -1.3
BUD28YLR062C YLR271WQ06152 274 aa6.94□□□□□ -1.3
BUD28YLR062C LEU2P04173 364 aaPredicted RBP6.93□□□□□ -1.3
BUD28YLR062C BCH2P36122 765 aa6.93□□□□□ -1.3
BUD28YLR062C MTR4P47047 1073 aaKnown RBP6.93□□□□□ -1.3
BUD28YLR062C IES2P40154 320 aa6.92□□□□□ -1.3
BUD28YLR062C ORC1P54784 914 aaPredicted RBP6.92□□□□□ -1.3
BUD28YLR062C SLM3Q12093 417 aa6.92□□□□□ -1.3
BUD28YLR062C TCB1Q12466 1186 aa6.92□□□□□ -1.3
BUD28YLR062C RSF2P46974 1380 aa6.92□□□□□ -1.3
BUD28YLR062C YML133CQ03099 1374 aa6.92□□□□□ -1.3
BUD28YLR062C YLL067CQ07888 1374 aa6.92□□□□□ -1.3
BUD28YLR062C YLL066CQ99208 1374 aa6.92□□□□□ -1.3
BUD28YLR062C LEU3P08638 886 aa6.91□□□□□ -1.3
BUD28YLR062C RPS24AP0CX31 135 aaKnown RBP6.91□□□□□ -1.3
BUD28YLR062C RPS24BP0CX32 135 aaKnown RBP6.91□□□□□ -1.3
BUD28YLR062C CSE4P36012 229 aa6.91□□□□□ -1.3
BUD28YLR062C DOT5P40553 215 aa6.91□□□□□ -1.3
BUD28YLR062C MAP2P38174 421 aaKnown RBP6.9□□□□□ -1.3
BUD28YLR062C SCY1P53009 804 aa6.9□□□□□ -1.3
BUD28YLR062C UBP10P53874 792 aaPredicted RBP6.9□□□□□ -1.3
BUD28YLR062C ROM2P51862 1356 aaKnown RBP6.9□□□□□ -1.31
BUD28YLR062C RPN11P43588 306 aaKnown RBP6.89□□□□□ -1.31
BUD28YLR062C SNF2P22082 1703 aa6.88□□□□□ -1.31
BUD28YLR062C BBC1P47068 1157 aa6.88□□□□□ -1.31
BUD28YLR062C FOX2Q02207 900 aaKnown RBP6.88□□□□□ -1.31
BUD28YLR062C EDE1P34216 1381 aa6.87□□□□□ -1.31
BUD28YLR062C AI2P03876 854 aa6.87□□□□□ -1.31
BUD28YLR062C UBP1P25037 809 aa6.87□□□□□ -1.31
BUD28YLR062C SCT1P32784 759 aa6.87□□□□□ -1.31
BUD28YLR062C RIM15P43565 1770 aa6.85□□□□□ -1.31
BUD28YLR062C YEF3P16521 1044 aaKnown RBP6.85□□□□□ -1.31
BUD28YLR062C NPR2P39923 615 aa6.85□□□□□ -1.31
BUD28YLR062C FKH1P40466 484 aa6.84□□□□□ -1.31
BUD28YLR062C EPS1P40557 701 aa6.84□□□□□ -1.31
BUD28YLR062C XKS1P42826 600 aa6.84□□□□□ -1.31
BUD28YLR062C YKL133CP36066 463 aa6.83□□□□□ -1.32
BUD28YLR062C YBL086CP38177 466 aa6.82□□□□□ -1.32
BUD28YLR062C ENP1P38333 483 aaKnown RBP6.82□□□□□ -1.32
BUD28YLR062C COBP00163 385 aa6.81□□□□□ -1.32
BUD28YLR062C YKR075CP36155 307 aa6.81□□□□□ -1.32
BUD28YLR062C GTT3P39996 337 aa6.81□□□□□ -1.32
BUD28YLR062C YJL181WP46987 611 aa6.81□□□□□ -1.32
BUD28YLR062C LYS4P49367 693 aaPredicted RBP6.81□□□□□ -1.32
BUD28YLR062C DPS1P04802 557 aaKnown RBP6.8□□□□□ -1.32
BUD28YLR062C PDI1P17967 522 aaKnown RBP6.8□□□□□ -1.32
BUD28YLR062C RTG3P38165 486 aa6.8□□□□□ -1.32
Retrieved 100 of 5,963 RNA–protein pairs in 7.6 ms