RNA–Protein interactions for RNA: YKL139W

CTK1, Transcript of Catalytic (alpha) subunit of C-terminal domain kinase I (CTDK-I), yeastyeast

Gene CTK1, Length 1,587 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CTK1YKL139W RAD59Q12223 238 aa6.48□□□□□ -1.37
CTK1YKL139W MMP1Q12372 583 aa6.48□□□□□ -1.37
CTK1YKL139W RPP1BP10622 106 aaKnown RBP6.47□□□□□ -1.37
CTK1YKL139W YEL023CP39992 682 aa6.47□□□□□ -1.37
CTK1YKL139W YPR204WQ08995 1032 aa6.47□□□□□ -1.37
CTK1YKL139W CPS1P27614 576 aa6.46□□□□□ -1.38
CTK1YKL139W VRP1P37370 817 aa6.46□□□□□ -1.38
CTK1YKL139W CDC73Q06697 393 aa6.46□□□□□ -1.38
CTK1YKL139W DPS1P04802 557 aaKnown RBP6.45□□□□□ -1.38
CTK1YKL139W RTG2P32608 588 aaKnown RBP6.45□□□□□ -1.38
CTK1YKL139W NOP8Q08287 484 aaPredicted RBP6.45□□□□□ -1.38
CTK1YKL139W YJU3P28321 313 aa6.44□□□□□ -1.38
CTK1YKL139W RGA1P39083 1007 aa6.44□□□□□ -1.38
CTK1YKL139W YNL108CP53929 270 aa6.44□□□□□ -1.38
CTK1YKL139W CSE4P36012 229 aa6.44□□□□□ -1.38
CTK1YKL139W TTI1P36097 1038 aa6.44□□□□□ -1.38
CTK1YKL139W TFB4Q12004 338 aa6.44□□□□□ -1.38
CTK1YKL139W ARG8P18544 423 aa6.42□□□□□ -1.38
CTK1YKL139W SIT4P20604 311 aa6.42□□□□□ -1.38
CTK1YKL139W PEX21P50091 288 aa6.42□□□□□ -1.38
CTK1YKL139W TUM1Q08686 304 aaKnown RBP6.41□□□□□ -1.38
CTK1YKL139W PTC4P38089 393 aa6.4□□□□□ -1.38
CTK1YKL139W SUP45P12385 437 aaKnown RBP6.4□□□□□ -1.39
CTK1YKL139W NOB1Q08444 459 aaKnown RBP6.39□□□□□ -1.39
CTK1YKL139W YDJ1P25491 409 aaKnown RBP6.37□□□□□ -1.39
CTK1YKL139W RPL34AP87262 121 aaPredicted RBP6.37□□□□□ -1.39
CTK1YKL139W ENO2P00925 437 aaKnown RBP6.36□□□□□ -1.39
CTK1YKL139W SLY41P22215 453 aa6.36□□□□□ -1.39
CTK1YKL139W RSC30P38781 883 aa6.36□□□□□ -1.39
CTK1YKL139W ENO1P00924 437 aaKnown RBP6.35□□□□□ -1.39
CTK1YKL139W YRR1Q12172 810 aa6.35□□□□□ -1.39
CTK1YKL139W SPT5P27692 1063 aaKnown RBP6.35□□□□□ -1.39
CTK1YKL139W DPL1Q05567 589 aa6.35□□□□□ -1.39
CTK1YKL139W MAK16P10962 306 aaPredicted RBP6.34□□□□□ -1.39
CTK1YKL139W MID1P41821 548 aa6.34□□□□□ -1.39
CTK1YKL139W LAM6Q08001 693 aa6.34□□□□□ -1.39
CTK1YKL139W YNL115CP53925 644 aa6.33□□□□□ -1.4
CTK1YKL139W YML083CQ04526 418 aa6.33□□□□□ -1.4
CTK1YKL139W MRX10Q05648 414 aa6.33□□□□□ -1.4
CTK1YKL139W PUP1P25043 261 aa6.32□□□□□ -1.4
CTK1YKL139W MPC54Q08550 464 aa6.32□□□□□ -1.4
CTK1YKL139W CDC3P32457 520 aaKnown RBP6.31□□□□□ -1.4
CTK1YKL139W RIM21P48565 533 aa6.31□□□□□ -1.4
CTK1YKL139W RTF1P53064 558 aa6.31□□□□□ -1.4
CTK1YKL139W ELP4Q02884 456 aaKnown RBP6.31□□□□□ -1.4
CTK1YKL139W PML39Q03760 334 aa6.31□□□□□ -1.4
CTK1YKL139W SIS2P36024 562 aa6.31□□□□□ -1.4
CTK1YKL139W TRM1P15565 570 aaKnown RBP6.3□□□□□ -1.4
CTK1YKL139W KEX2P13134 814 aa6.29□□□□□ -1.4
CTK1YKL139W ISU2Q12056 156 aa6.29□□□□□ -1.4
CTK1YKL139W SLD2P34252 453 aa6.28□□□□□ -1.4
CTK1YKL139W TGL4P36165 910 aa6.28□□□□□ -1.4
CTK1YKL139W BUB1P41695 1021 aaKnown RBP RIP-Chip data6.27□□□□□ -1.41not detected
CTK1YKL139W ERF2Q06551 359 aa6.27□□□□□ -1.41
CTK1YKL139W NUD1P32336 851 aa6.27□□□□□ -1.41
CTK1YKL139W MRX12P47084 519 aa6.27□□□□□ -1.41
CTK1YKL139W PUS6P53294 404 aa6.27□□□□□ -1.41
CTK1YKL139W NMA111P53920 997 aa6.27□□□□□ -1.41
CTK1YKL139W PEX29Q03370 554 aa6.27□□□□□ -1.41
CTK1YKL139W SSF1P38789 453 aaPredicted RBP6.26□□□□□ -1.41
CTK1YKL139W YPP1P46951 817 aa6.26□□□□□ -1.41
CTK1YKL139W NAF1P53919 492 aaKnown RBP6.26□□□□□ -1.41
CTK1YKL139W MCM16Q12262 181 aa6.25□□□□□ -1.41
CTK1YKL139W PEP12P32854 288 aa6.24□□□□□ -1.41
CTK1YKL139W TBF1Q02457 562 aa6.24□□□□□ -1.41
CTK1YKL139W HAT1Q12341 374 aa6.24□□□□□ -1.41
CTK1YKL139W RDS2P19541 446 aaKnown RBP6.23□□□□□ -1.41
CTK1YKL139W KTR7P40504 517 aa6.23□□□□□ -1.41
CTK1YKL139W SRC1Q03707 834 aa6.23□□□□□ -1.41
CTK1YKL139W PDR1P12383 1068 aa6.22□□□□□ -1.41
CTK1YKL139W ISF1P32488 338 aa6.22□□□□□ -1.41
CTK1YKL139W NPL4P33755 580 aa6.22□□□□□ -1.41
CTK1YKL139W ECM23Q02710 187 aa6.22□□□□□ -1.41
CTK1YKL139W SEN54Q02825 467 aaPredicted RBP6.21□□□□□ -1.42
CTK1YKL139W YDR344CQ05510 147 aa6.2□□□□□ -1.42
CTK1YKL139W YDL206WQ12424 762 aa6.2□□□□□ -1.42
CTK1YKL139W EMP47P43555 445 aa6.19□□□□□ -1.42
CTK1YKL139W STR2P47164 639 aa6.19□□□□□ -1.42
CTK1YKL139W ISM1P48526 1002 aa6.19□□□□□ -1.42
CTK1YKL139W ENV9Q08651 330 aa6.18□□□□□ -1.42
CTK1YKL139W UBX7P38349 436 aa6.18□□□□□ -1.42
CTK1YKL139W GAL2P13181 574 aa6.17□□□□□ -1.42
CTK1YKL139W TUB4P53378 473 aa6.17□□□□□ -1.42
CTK1YKL139W AGE1Q04412 482 aa6.17□□□□□ -1.42
CTK1YKL139W HEM3P28789 327 aa6.16□□□□□ -1.42
CTK1YKL139W GCD11P32481 527 aaKnown RBP6.16□□□□□ -1.42
CTK1YKL139W RAM1P22007 431 aa6.15□□□□□ -1.42
CTK1YKL139W ARH1P48360 493 aa6.15□□□□□ -1.42
CTK1YKL139W SNU71P53207 620 aaKnown RBP6.15□□□□□ -1.42
CTK1YKL139W NOP7P53261 605 aaKnown RBP6.15□□□□□ -1.42
CTK1YKL139W TY1A-DR4O74302 440 aa6.14□□□□□ -1.43
CTK1YKL139W TY1A-HP0C2I4 478 aaKnown RBP6.14□□□□□ -1.43
CTK1YKL139W TY1A-AP0CX57 440 aa6.14□□□□□ -1.43
CTK1YKL139W TY1A-PR1P0CX58 440 aa6.14□□□□□ -1.43
CTK1YKL139W TY1A-ORP0CX59 440 aa6.14□□□□□ -1.43
CTK1YKL139W TY1A-PR2P0CX60 440 aa6.14□□□□□ -1.43
CTK1YKL139W TY1A-DR5P0CX65 440 aa6.14□□□□□ -1.43
CTK1YKL139W TY1A-ER2P0CX66 440 aa6.14□□□□□ -1.43
CTK1YKL139W TY1A-GR3P0CX67 440 aa6.14□□□□□ -1.43
CTK1YKL139W TY1A-LR1P0CX68 440 aa6.14□□□□□ -1.43
Retrieved 100 of 5,963 RNA–protein pairs in 81.2 ms