RNA–Protein interactions for RNA: YKL039W

PTM1, Transcript of Protein of unknown function, yeastyeast

Gene PTM1, Length 1,572 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PTM1YKL039W TY1A-PR1P0CX58 440 aa8.56□□□□□ -1.04
PTM1YKL039W TY1A-ORP0CX59 440 aa8.56□□□□□ -1.04
PTM1YKL039W TY1A-PR2P0CX60 440 aa8.56□□□□□ -1.04
PTM1YKL039W TY1A-DR5P0CX65 440 aa8.56□□□□□ -1.04
PTM1YKL039W TY1A-ER2P0CX66 440 aa8.56□□□□□ -1.04
PTM1YKL039W TY1A-GR3P0CX67 440 aa8.56□□□□□ -1.04
PTM1YKL039W TY1A-LR1P0CX68 440 aa8.56□□□□□ -1.04
PTM1YKL039W TY1A-MR2P0CX69 440 aa8.56□□□□□ -1.04
PTM1YKL039W KEX2P13134 814 aa8.56□□□□□ -1.04
PTM1YKL039W TY1A-JR2P47099 440 aa8.56□□□□□ -1.04
PTM1YKL039W HST2P53686 357 aa8.56□□□□□ -1.04
PTM1YKL039W TY1A-DR1Q03856 440 aa8.56□□□□□ -1.04
PTM1YKL039W TY1A-ML1Q04706 440 aaKnown RBP8.56□□□□□ -1.04
PTM1YKL039W ERF2Q06551 359 aa8.56□□□□□ -1.04
PTM1YKL039W TY1A-BRQ12217 440 aa8.56□□□□□ -1.04
PTM1YKL039W TY1A-NL2Q12470 440 aa8.56□□□□□ -1.04
PTM1YKL039W TY1A-GR2Q12485 440 aa8.56□□□□□ -1.04
PTM1YKL039W KTR1P27810 393 aaKnown RBP8.54□□□□□ -1.04
PTM1YKL039W BCK2P33306 851 aa8.54□□□□□ -1.04
PTM1YKL039W VRP1P37370 817 aa8.54□□□□□ -1.04
PTM1YKL039W GUA1P38625 525 aaKnown RBP8.54□□□□□ -1.04
PTM1YKL039W RTF1P53064 558 aa8.54□□□□□ -1.04
PTM1YKL039W CSN12P47130 423 aa8.52□□□□□ -1.04
PTM1YKL039W YNL115CP53925 644 aa8.52□□□□□ -1.04
PTM1YKL039W SEC2P17065 759 aa8.52□□□□□ -1.05
PTM1YKL039W TYW1Q08960 810 aaKnown RBP8.52□□□□□ -1.05
PTM1YKL039W SCJ1P25303 377 aa8.51□□□□□ -1.05
PTM1YKL039W PRT1P06103 763 aaKnown RBP8.5□□□□□ -1.05
PTM1YKL039W GLN1P32288 370 aaKnown RBP8.5□□□□□ -1.05
PTM1YKL039W GCD11P32481 527 aaKnown RBP8.5□□□□□ -1.05
PTM1YKL039W MMP1Q12372 583 aa8.5□□□□□ -1.05
PTM1YKL039W SSA2P10592 639 aaKnown RBP8.47□□□□□ -1.05
PTM1YKL039W ESS1P22696 170 aa8.47□□□□□ -1.05
PTM1YKL039W SLY41P22215 453 aa8.46□□□□□ -1.06
PTM1YKL039W HPC2Q01448 625 aa8.46□□□□□ -1.06
PTM1YKL039W AGE1Q04412 482 aa8.46□□□□□ -1.06
PTM1YKL039W GYP1Q08484 637 aa8.45□□□□□ -1.06
PTM1YKL039W YJU3P28321 313 aa8.44□□□□□ -1.06
PTM1YKL039W SAS4Q04003 481 aa8.44□□□□□ -1.06
PTM1YKL039W XDJ1P39102 459 aa8.43□□□□□ -1.06
PTM1YKL039W TUB4P53378 473 aa8.42□□□□□ -1.06
PTM1YKL039W PKH3Q03306 898 aaPredicted RBP8.42□□□□□ -1.06
PTM1YKL039W RRN7P40992 514 aa8.4□□□□□ -1.06
PTM1YKL039W SDH2P21801 266 aa8.39□□□□□ -1.07
PTM1YKL039W PAC1P39946 494 aaKnown RBP8.39□□□□□ -1.07
PTM1YKL039W DMA2P53924 522 aa8.39□□□□□ -1.07
PTM1YKL039W TFB3Q03290 321 aa8.39□□□□□ -1.07
PTM1YKL039W TRM1P15565 570 aaKnown RBP8.39□□□□□ -1.07
PTM1YKL039W RAD59Q12223 238 aa8.38□□□□□ -1.07
PTM1YKL039W PUS6P53294 404 aa8.37□□□□□ -1.07
PTM1YKL039W RSC30P38781 883 aa8.36□□□□□ -1.07
PTM1YKL039W BUB1P41695 1021 aaKnown RBP RIP-Chip data8.36□□□□□ -1.07not detected
PTM1YKL039W LAM6Q08001 693 aa8.36□□□□□ -1.07
PTM1YKL039W SPT16P32558 1035 aaKnown RBP8.35□□□□□ -1.07
PTM1YKL039W BRL1P38770 471 aa8.35□□□□□ -1.07
PTM1YKL039W ARG8P18544 423 aa8.34□□□□□ -1.07
PTM1YKL039W PAT1P25644 796 aaKnown RBP8.34□□□□□ -1.07
PTM1YKL039W TBF1Q02457 562 aa8.34□□□□□ -1.07
PTM1YKL039W PKC1P24583 1151 aa8.32□□□□□ -1.08
PTM1YKL039W MRF1P30775 413 aaPredicted RBP8.32□□□□□ -1.08
PTM1YKL039W YDL206WQ12424 762 aa8.32□□□□□ -1.08
PTM1YKL039W RPA14P50106 137 aa8.3□□□□□ -1.08
PTM1YKL039W PDC1P06169 563 aaKnown RBP8.29□□□□□ -1.08
PTM1YKL039W HGH1P48362 394 aaKnown RBP8.29□□□□□ -1.08
PTM1YKL039W MOD5P07884 428 aa8.28□□□□□ -1.08
PTM1YKL039W ERG12P07277 443 aa8.27□□□□□ -1.09
PTM1YKL039W KXD1P53158 218 aa8.27□□□□□ -1.09
PTM1YKL039W YPR097WQ06839 1073 aa8.27□□□□□ -1.09
PTM1YKL039W CST6P40535 587 aa8.26□□□□□ -1.09
PTM1YKL039W ALR1Q08269 859 aa8.26□□□□□ -1.09
PTM1YKL039W YEL077CQ3E7X8 1277 aa8.26□□□□□ -1.09
PTM1YKL039W TPD3P31383 635 aa8.25□□□□□ -1.09
PTM1YKL039W YBL036CP38197 257 aa8.25□□□□□ -1.09
PTM1YKL039W MAK16P10962 306 aaPredicted RBP8.24□□□□□ -1.09
PTM1YKL039W AMS1P22855 1083 aa8.24□□□□□ -1.09
PTM1YKL039W HXT10P43581 546 aa8.24□□□□□ -1.09
PTM1YKL039W CSE4P36012 229 aa8.22□□□□□ -1.09
PTM1YKL039W RRD1P40454 393 aaKnown RBP8.22□□□□□ -1.09
PTM1YKL039W BIO2P32451 375 aa8.22□□□□□ -1.09
PTM1YKL039W BDP1P46678 594 aa8.22□□□□□ -1.09
PTM1YKL039W RAS1P01119 309 aa8.2□□□□□ -1.1
PTM1YKL039W DPS1P04802 557 aaKnown RBP8.2□□□□□ -1.1
PTM1YKL039W FRK1Q03002 865 aaPredicted RBP8.19□□□□□ -1.1
PTM1YKL039W YJL007CP47080 104 aa8.18□□□□□ -1.1
PTM1YKL039W SPT5P27692 1063 aaKnown RBP8.16□□□□□ -1.1
PTM1YKL039W NAF1P53919 492 aaKnown RBP8.16□□□□□ -1.1
PTM1YKL039W BIM1P40013 344 aa8.15□□□□□ -1.1
PTM1YKL039W PUS5Q06244 254 aa8.15□□□□□ -1.1
PTM1YKL039W ATG32P40458 529 aa8.14□□□□□ -1.11
PTM1YKL039W FIG4P42837 879 aa8.14□□□□□ -1.11
PTM1YKL039W YDJ1P25491 409 aaKnown RBP8.12□□□□□ -1.11
PTM1YKL039W VAC17P25591 423 aa8.12□□□□□ -1.11
PTM1YKL039W TEC1P18412 486 aa8.11□□□□□ -1.11
PTM1YKL039W CLA4P48562 842 aa8.11□□□□□ -1.11
PTM1YKL039W YNL108CP53929 270 aa8.11□□□□□ -1.11
PTM1YKL039W SUP45P12385 437 aaKnown RBP8.1□□□□□ -1.11
PTM1YKL039W YPR084WQ06821 456 aa8.1□□□□□ -1.11
PTM1YKL039W TIF1P10081 395 aaKnown RBP8.08□□□□□ -1.12
PTM1YKL039W MCM16Q12262 181 aa8.08□□□□□ -1.12
PTM1YKL039W ENO2P00925 437 aaKnown RBP8.07□□□□□ -1.12
Retrieved 100 of 5,963 RNA–protein pairs in 26.8 ms