RNA–Protein interactions for RNA: YJR139C

HOM6, Transcript of Homoserine dehydrogenase (L-homoserine:NADP oxidoreductase), yeastyeast

Gene HOM6, Length 1,080 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HOM6YJR139C RRP5Q05022 1729 aaKnown RBP17.62■□□□□ 0.41
HOM6YJR139C TY4B-HP0C2J7 1802 aa17.62■□□□□ 0.41
HOM6YJR139C TY4B-JP47024 1803 aa17.62■□□□□ 0.41
HOM6YJR139C YLR419WQ06698 1435 aaKnown RBP17.61■□□□□ 0.41
HOM6YJR139C PSK1P31374 1356 aa17.57■□□□□ 0.4
HOM6YJR139C ENT1Q12518 454 aa17.57■□□□□ 0.4
HOM6YJR139C YIL055CP40523 627 aaKnown RBP17.52■□□□□ 0.4
HOM6YJR139C YRF1-2P40105 1681 aa17.52■□□□□ 0.39
HOM6YJR139C PRP45P28004 379 aaPredicted RBP17.51■□□□□ 0.39
HOM6YJR139C CHZ1P40019 153 aaPredicted RBP17.51■□□□□ 0.39
HOM6YJR139C ENV9Q08651 330 aa17.49■□□□□ 0.39
HOM6YJR139C ADE6P38972 1358 aaKnown RBP17.49■□□□□ 0.39
HOM6YJR139C GLN1P32288 370 aaKnown RBP17.44■□□□□ 0.38
HOM6YJR139C PRP5P21372 849 aaPredicted RBP17.43■□□□□ 0.38
HOM6YJR139C IMH1Q06704 911 aaKnown RBP17.4■□□□□ 0.38
HOM6YJR139C LEU2P04173 364 aaPredicted RBP17.38■□□□□ 0.37
HOM6YJR139C SCT1P32784 759 aa17.38■□□□□ 0.37
HOM6YJR139C YML133CQ03099 1374 aa17.37■□□□□ 0.37
HOM6YJR139C YLL067CQ07888 1374 aa17.37■□□□□ 0.37
HOM6YJR139C YLL066CQ99208 1374 aa17.37■□□□□ 0.37
HOM6YJR139C MTR4P47047 1073 aaKnown RBP17.36■□□□□ 0.37
HOM6YJR139C CSE4P36012 229 aa17.35■□□□□ 0.37
HOM6YJR139C MSB3P48566 633 aaPredicted RBP17.34■□□□□ 0.37
HOM6YJR139C MLP1Q02455 1875 aaKnown RBP17.33■□□□□ 0.37
HOM6YJR139C RPS24AP0CX31 135 aaKnown RBP17.32■□□□□ 0.36
HOM6YJR139C RPS24BP0CX32 135 aaKnown RBP17.32■□□□□ 0.36
HOM6YJR139C PRP43P53131 767 aaKnown RBP17.32■□□□□ 0.36
HOM6YJR139C POL5P39985 1022 aaKnown RBP17.3■□□□□ 0.36
HOM6YJR139C YIL177CP40434 1758 aa17.28■□□□□ 0.36
HOM6YJR139C YJL225CP40889 1758 aa17.28■□□□□ 0.36
HOM6YJR139C YMR074CQ04773 145 aa17.27■□□□□ 0.36
HOM6YJR139C URB1P34241 1764 aaKnown RBP17.26■□□□□ 0.35
HOM6YJR139C FKH1P40466 484 aa17.26■□□□□ 0.35
HOM6YJR139C SLM3Q12093 417 aa17.23■□□□□ 0.35
HOM6YJR139C TCB1Q12466 1186 aa17.23■□□□□ 0.35
HOM6YJR139C RTG3P38165 486 aa17.22■□□□□ 0.35
HOM6YJR139C MHP1P43638 1398 aa17.22■□□□□ 0.35
HOM6YJR139C FKS3Q04952 1785 aa17.2■□□□□ 0.34
HOM6YJR139C RSF2P46974 1380 aa17.19■□□□□ 0.34
HOM6YJR139C IES2P40154 320 aa17.19■□□□□ 0.34
HOM6YJR139C LEU3P08638 886 aa17.18■□□□□ 0.34
HOM6YJR139C YRF1-3P0CX14 1859 aa17.14■□□□□ 0.33
HOM6YJR139C YRF1-7P0CX15 1859 aa17.14■□□□□ 0.33
HOM6YJR139C YRF1-6P53819 1859 aa17.14■□□□□ 0.33
HOM6YJR139C PDS5Q04264 1277 aa17.14■□□□□ 0.33
HOM6YJR139C APC1P53886 1748 aa17.13■□□□□ 0.33
HOM6YJR139C PDI1P17967 522 aaKnown RBP17.13■□□□□ 0.33
HOM6YJR139C DPS1P04802 557 aaKnown RBP17.12■□□□□ 0.33
HOM6YJR139C GAS4Q08271 471 aa17.12■□□□□ 0.33
HOM6YJR139C RTF1P53064 558 aa17.11■□□□□ 0.33
HOM6YJR139C BUD31P25337 157 aaPredicted RBP17.1■□□□□ 0.33
HOM6YJR139C XKS1P42826 600 aa17.1■□□□□ 0.33
HOM6YJR139C DOT5P40553 215 aa17.09■□□□□ 0.33
HOM6YJR139C ROM2P51862 1356 aaKnown RBP17.08■□□□□ 0.32
HOM6YJR139C ENP1P38333 483 aaKnown RBP17.07■□□□□ 0.32
HOM6YJR139C AUS1Q08409 1394 aa17.06■□□□□ 0.32
HOM6YJR139C PRI1P10363 409 aa17.05■□□□□ 0.32
HOM6YJR139C RPN11P43588 306 aaKnown RBP17.03■□□□□ 0.32
HOM6YJR139C FOX2Q02207 900 aaKnown RBP17.03■□□□□ 0.32
HOM6YJR139C TAP42Q04372 366 aa17.03■□□□□ 0.32
HOM6YJR139C YKL133CP36066 463 aa17.01■□□□□ 0.31
HOM6YJR139C HIM1Q06674 414 aa17.01■□□□□ 0.31
HOM6YJR139C GRX4P32642 244 aa17■□□□□ 0.31
HOM6YJR139C SEC3P33332 1336 aaKnown RBP16.98■□□□□ 0.31
HOM6YJR139C UBP1P25037 809 aa16.97■□□□□ 0.31
HOM6YJR139C YEF3P16521 1044 aaKnown RBP16.95■□□□□ 0.3
HOM6YJR139C RCR1P38212 213 aa16.94■□□□□ 0.3
HOM6YJR139C NST1P53935 1240 aa16.94■□□□□ 0.3
HOM6YJR139C SNF2P22082 1703 aa16.93■□□□□ 0.3
HOM6YJR139C YRF1-4O13559 1382 aa16.93■□□□□ 0.3
HOM6YJR139C COBP00163 385 aa16.93■□□□□ 0.3
HOM6YJR139C KAR2P16474 682 aaKnown RBP16.93■□□□□ 0.3
HOM6YJR139C SIR4P11978 1358 aa16.92■□□□□ 0.3
HOM6YJR139C EDE1P34216 1381 aa16.9■□□□□ 0.3
HOM6YJR139C YJL181WP46987 611 aa16.9■□□□□ 0.3
HOM6YJR139C LAM6Q08001 693 aa16.9■□□□□ 0.3
HOM6YJR139C NPR2P39923 615 aa16.88■□□□□ 0.29
HOM6YJR139C FRK1Q03002 865 aaPredicted RBP16.88■□□□□ 0.29
HOM6YJR139C PRP40P33203 583 aaKnown RBP16.87■□□□□ 0.29
HOM6YJR139C YKR075CP36155 307 aa16.87■□□□□ 0.29
HOM6YJR139C MEC3Q02574 474 aa16.87■□□□□ 0.29
HOM6YJR139C RPO41P13433 1351 aaKnown RBP16.87■□□□□ 0.29
HOM6YJR139C ADE16P54113 591 aaKnown RBP16.86■□□□□ 0.29
HOM6YJR139C TRK1P12685 1235 aa16.85■□□□□ 0.29
HOM6YJR139C BUB1P41695 1021 aaKnown RBP RIP-Chip data16.84■□□□□ 0.29not detected
HOM6YJR139C PSD2P53037 1138 aaKnown RBP16.84■□□□□ 0.29
HOM6YJR139C LYS4P49367 693 aaPredicted RBP16.82■□□□□ 0.28
HOM6YJR139C PAP2P53632 584 aaKnown RBP16.82■□□□□ 0.28
HOM6YJR139C RIM15P43565 1770 aa16.79■□□□□ 0.28
HOM6YJR139C YBL086CP38177 466 aa16.79■□□□□ 0.28
HOM6YJR139C ATG13Q06628 738 aa16.76■□□□□ 0.27
HOM6YJR139C DSD1P53095 428 aa16.75■□□□□ 0.27
HOM6YJR139C INP54Q08227 384 aaKnown RBP16.75■□□□□ 0.27
HOM6YJR139C HSP104P31539 908 aaKnown RBP16.72■□□□□ 0.27
HOM6YJR139C AKL1P38080 1108 aaKnown RBP16.71■□□□□ 0.27
HOM6YJR139C OSM1P21375 501 aaKnown RBP16.7■□□□□ 0.26
HOM6YJR139C ALD2P47771 506 aa16.7■□□□□ 0.26
HOM6YJR139C UGA2P38067 497 aa16.69■□□□□ 0.26
HOM6YJR139C GTT3P39996 337 aa16.69■□□□□ 0.26
HOM6YJR139C CTH1P47976 325 aa16.69■□□□□ 0.26
Retrieved 100 of 5,963 RNA–protein pairs in 14.2 ms