RNA–Protein interactions for RNA: YJR024C

MDE1, Transcript of 5'-methylthioribulose-1-phosphate dehydratase, yeastyeast

Gene MDE1, Length 735 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MDE1YJR024C MAP2P38174 421 aaKnown RBP8.73□□□□□ -1.01
MDE1YJR024C HAP1P0CE41 1502 aa8.71□□□□□ -1.01
MDE1YJR024C USO1P25386 1790 aa8.71□□□□□ -1.02
MDE1YJR024C SCY1P53009 804 aa8.7□□□□□ -1.02
MDE1YJR024C EPS1P40557 701 aa8.69□□□□□ -1.02
MDE1YJR024C MGA2P40578 1113 aa8.69□□□□□ -1.02
MDE1YJR024C TAF5P38129 798 aa8.68□□□□□ -1.02
MDE1YJR024C UBP10P53874 792 aaPredicted RBP8.68□□□□□ -1.02
MDE1YJR024C TY3B-IQ7LHG5 1498 aaKnown RBP8.68□□□□□ -1.02
MDE1YJR024C ESL2P36168 1195 aa8.67□□□□□ -1.02
MDE1YJR024C PSD2P53037 1138 aaKnown RBP8.67□□□□□ -1.02
MDE1YJR024C CST9Q06032 482 aa8.67□□□□□ -1.02
MDE1YJR024C MLP1Q02455 1875 aaKnown RBP8.66□□□□□ -1.02
MDE1YJR024C BBC1P47068 1157 aa8.66□□□□□ -1.02
MDE1YJR024C ORC1P54784 914 aaPredicted RBP8.66□□□□□ -1.02
MDE1YJR024C BDF1P35817 686 aa8.63□□□□□ -1.03
MDE1YJR024C BCK1Q01389 1478 aa8.63□□□□□ -1.03
MDE1YJR024C DMA1P38823 416 aa8.62□□□□□ -1.03
MDE1YJR024C TY1B-NL2Q99337 1749 aaKnown RBP8.61□□□□□ -1.03
MDE1YJR024C MAK10Q02197 733 aa8.61□□□□□ -1.03
MDE1YJR024C RAD9P14737 1309 aa8.6□□□□□ -1.03
MDE1YJR024C KIP3P53086 805 aaKnown RBP8.6□□□□□ -1.03
MDE1YJR024C YLR419WQ06698 1435 aaKnown RBP8.6□□□□□ -1.03
MDE1YJR024C ALD4P46367 519 aaKnown RBP8.59□□□□□ -1.03
MDE1YJR024C MHP1P43638 1398 aa8.59□□□□□ -1.03
MDE1YJR024C MRX12P47084 519 aa8.57□□□□□ -1.04
MDE1YJR024C CAB1Q04430 367 aa8.57□□□□□ -1.04
MDE1YJR024C NAP1P25293 417 aaKnown RBP8.56□□□□□ -1.04
MDE1YJR024C KRE5P22023 1365 aa8.56□□□□□ -1.04
MDE1YJR024C SEC3P33332 1336 aaKnown RBP8.55□□□□□ -1.04
MDE1YJR024C SCT1P32784 759 aa8.55□□□□□ -1.04
MDE1YJR024C TAF8Q03750 510 aa8.55□□□□□ -1.04
MDE1YJR024C SPE2P21182 396 aa8.54□□□□□ -1.04
MDE1YJR024C RIA1P53893 1110 aa8.53□□□□□ -1.04
MDE1YJR024C SLX5P32828 619 aaKnown RBP8.52□□□□□ -1.05
MDE1YJR024C CFT1Q06632 1357 aaKnown RBP8.51□□□□□ -1.05
MDE1YJR024C SPT7P35177 1332 aa8.51□□□□□ -1.05
MDE1YJR024C MRM1P25270 412 aa8.49□□□□□ -1.05
MDE1YJR024C PDS5Q04264 1277 aa8.49□□□□□ -1.05
MDE1YJR024C MIF2P35201 549 aa8.48□□□□□ -1.05
MDE1YJR024C CHZ1P40019 153 aaPredicted RBP8.46□□□□□ -1.06
MDE1YJR024C LEU3P08638 886 aa8.44□□□□□ -1.06
MDE1YJR024C ENP1P38333 483 aaKnown RBP8.44□□□□□ -1.06
MDE1YJR024C TY4B-HP0C2J7 1802 aa8.44□□□□□ -1.06
MDE1YJR024C TY4B-JP47024 1803 aa8.44□□□□□ -1.06
MDE1YJR024C YNR029CP53729 429 aaKnown RBP8.43□□□□□ -1.06
MDE1YJR024C RCM1P53972 490 aa8.42□□□□□ -1.06
MDE1YJR024C YMR196WQ04336 1088 aa8.42□□□□□ -1.06
MDE1YJR024C PSK1P31374 1356 aa8.41□□□□□ -1.06
MDE1YJR024C NSR1P27476 414 aaKnown RBP RIP-Chip data8.4□□□□□ -1.06not detected
MDE1YJR024C RTG3P38165 486 aa8.4□□□□□ -1.06
MDE1YJR024C RCR1P38212 213 aa8.39□□□□□ -1.07
MDE1YJR024C PPH3P32345 308 aa8.38□□□□□ -1.07
MDE1YJR024C FKH1P40466 484 aa8.38□□□□□ -1.07
MDE1YJR024C CPS1P27614 576 aa8.37□□□□□ -1.07
MDE1YJR024C THI12P42883 340 aa8.36□□□□□ -1.07
MDE1YJR024C THI5P43534 340 aa8.36□□□□□ -1.07
MDE1YJR024C THI11P47183 340 aa8.36□□□□□ -1.07
MDE1YJR024C NST1P53935 1240 aa8.36□□□□□ -1.07
MDE1YJR024C THI13Q07748 340 aa8.36□□□□□ -1.07
MDE1YJR024C YML133CQ03099 1374 aa8.35□□□□□ -1.07
MDE1YJR024C YLL067CQ07888 1374 aa8.35□□□□□ -1.07
MDE1YJR024C YLL066CQ99208 1374 aa8.35□□□□□ -1.07
MDE1YJR024C SNF2P22082 1703 aa8.34□□□□□ -1.07
MDE1YJR024C RAM2P29703 316 aa8.34□□□□□ -1.07
MDE1YJR024C YIL177CP40434 1758 aa8.33□□□□□ -1.08
MDE1YJR024C YJL225CP40889 1758 aa8.33□□□□□ -1.08
MDE1YJR024C LEU2P04173 364 aaPredicted RBP8.32□□□□□ -1.08
MDE1YJR024C TIF4632P39936 914 aaKnown RBP8.32□□□□□ -1.08
MDE1YJR024C MTR4P47047 1073 aaKnown RBP8.31□□□□□ -1.08
MDE1YJR024C RRP5Q05022 1729 aaKnown RBP8.31□□□□□ -1.08
MDE1YJR024C FKS3Q04952 1785 aa8.3□□□□□ -1.08
MDE1YJR024C VPS29P38759 282 aa8.29□□□□□ -1.08
MDE1YJR024C ADE6P38972 1358 aaKnown RBP8.28□□□□□ -1.08
MDE1YJR024C PDI1P17967 522 aaKnown RBP8.28□□□□□ -1.08
MDE1YJR024C TGL3P40308 642 aa8.28□□□□□ -1.08
MDE1YJR024C URB1P34241 1764 aaKnown RBP8.27□□□□□ -1.08
MDE1YJR024C TRK1P12685 1235 aa8.27□□□□□ -1.09
MDE1YJR024C YEF3P16521 1044 aaKnown RBP8.27□□□□□ -1.09
MDE1YJR024C CSE4P36012 229 aa8.27□□□□□ -1.09
MDE1YJR024C RTF1P53064 558 aa8.27□□□□□ -1.09
MDE1YJR024C YRF1-2P40105 1681 aa8.25□□□□□ -1.09
MDE1YJR024C RPS24AP0CX31 135 aaKnown RBP8.25□□□□□ -1.09
MDE1YJR024C RPS24BP0CX32 135 aaKnown RBP8.25□□□□□ -1.09
MDE1YJR024C KAR2P16474 682 aaKnown RBP8.25□□□□□ -1.09
MDE1YJR024C TAP42Q04372 366 aa8.25□□□□□ -1.09
MDE1YJR024C YFR006WP43590 535 aa8.24□□□□□ -1.09
MDE1YJR024C GRX4P32642 244 aa8.23□□□□□ -1.09
MDE1YJR024C PRS1P32895 427 aaKnown RBP8.23□□□□□ -1.09
MDE1YJR024C PRP43P53131 767 aaKnown RBP8.23□□□□□ -1.09
MDE1YJR024C AUS1Q08409 1394 aa8.22□□□□□ -1.09
MDE1YJR024C HIM1Q06674 414 aa8.22□□□□□ -1.09
MDE1YJR024C APC1P53886 1748 aa8.22□□□□□ -1.09
MDE1YJR024C PAP2P53632 584 aaKnown RBP8.21□□□□□ -1.1
MDE1YJR024C IOC4Q04213 475 aa8.21□□□□□ -1.1
MDE1YJR024C GAS4Q08271 471 aa8.21□□□□□ -1.1
MDE1YJR024C DPS1P04802 557 aaKnown RBP8.2□□□□□ -1.1
MDE1YJR024C RPP0P05317 312 aaKnown RBP8.18□□□□□ -1.1
MDE1YJR024C MAK11P20484 414 aaKnown RBP8.18□□□□□ -1.1
MDE1YJR024C YMR1P47147 688 aaKnown RBP RIP-Chip data8.18□□□□□ -1.1not detected
Retrieved 100 of 5,963 RNA–protein pairs in 12.8 ms