RNA–Protein interactions for RNA: YIL142W

CCT2, Transcript of Subunit beta of the cytosolic chaperonin Cct ring complex, yeast

Gene CCT2, Length 1,584 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CCT2	YIL142W	CHZ1	P40019	153 aa	Predicted RBP	11.52	□□□□□ -0.57
CCT2	YIL142W	ALD4	P46367	519 aa	Known RBP	11.52	□□□□□ -0.57
CCT2	YIL142W	YDL144C	Q07589	356 aa		11.52	□□□□□ -0.57
CCT2	YIL142W	URN1	Q06525	465 aa	Known RBP	11.5	□□□□□ -0.57
CCT2	YIL142W	RPC31	P17890	251 aa		11.5	□□□□□ -0.57
CCT2	YIL142W	YRB30	P53107	440 aa	Predicted RBP	11.5	□□□□□ -0.57
CCT2	YIL142W	TRK1	P12685	1235 aa		11.49	□□□□□ -0.57
CCT2	YIL142W	YEF3	P16521	1044 aa	Known RBP	11.49	□□□□□ -0.57
CCT2	YIL142W	FPR3	P38911	411 aa	Known RBP	11.48	□□□□□ -0.57
CCT2	YIL142W	NAP1	P25293	417 aa	Known RBP	11.45	□□□□□ -0.58
CCT2	YIL142W	SUI2	P20459	304 aa	Known RBP	11.45	□□□□□ -0.58
CCT2	YIL142W	YML133C	Q03099	1374 aa		11.44	□□□□□ -0.58
CCT2	YIL142W	YLL067C	Q07888	1374 aa		11.44	□□□□□ -0.58
CCT2	YIL142W	YLL066C	Q99208	1374 aa		11.44	□□□□□ -0.58
CCT2	YIL142W	CAB1	Q04430	367 aa		11.44	□□□□□ -0.58
CCT2	YIL142W	DNF3	Q12674	1656 aa		11.42	□□□□□ -0.58
CCT2	YIL142W	HAP1	P0CE41	1502 aa		11.41	□□□□□ -0.58
CCT2	YIL142W	MPP10	P47083	593 aa	Known RBP	11.41	□□□□□ -0.58
CCT2	YIL142W	IME2	P32581	645 aa		11.4	□□□□□ -0.58
CCT2	YIL142W	NAB6	Q03735	1134 aa	Known RBP RIP-Chip data	11.38	□□□□□ -0.59	not detected
CCT2	YIL142W	OPY1	P38271	328 aa		11.37	□□□□□ -0.59
CCT2	YIL142W	RTR1	P40084	226 aa	Predicted RBP	11.35	□□□□□ -0.59
CCT2	YIL142W	RRP46	P53256	223 aa	Predicted RBP	11.35	□□□□□ -0.59
CCT2	YIL142W	YFR016C	P43597	1233 aa	Known RBP	11.33	□□□□□ -0.6
CCT2	YIL142W	KRE5	P22023	1365 aa		11.32	□□□□□ -0.6
CCT2	YIL142W	PSK1	P31374	1356 aa		11.32	□□□□□ -0.6
CCT2	YIL142W	KAR2	P16474	682 aa	Known RBP	11.31	□□□□□ -0.6
CCT2	YIL142W	SAP155	P43612	1002 aa		11.31	□□□□□ -0.6
CCT2	YIL142W	RAD2	P07276	1031 aa		11.3	□□□□□ -0.6
CCT2	YIL142W	YIR014W	P40570	242 aa		11.3	□□□□□ -0.6
CCT2	YIL142W	TAP42	Q04372	366 aa		11.28	□□□□□ -0.6
CCT2	YIL142W	MRX12	P47084	519 aa		11.28	□□□□□ -0.6
CCT2	YIL142W	EAF7	P53911	425 aa	Known RBP	11.28	□□□□□ -0.6
CCT2	YIL142W	CLC1	P17891	233 aa		11.27	□□□□□ -0.61
CCT2	YIL142W	RCM1	P53972	490 aa		11.27	□□□□□ -0.61
CCT2	YIL142W	PRD1	P25375	712 aa		11.26	□□□□□ -0.61
CCT2	YIL142W	TPD3	P31383	635 aa		11.26	□□□□□ -0.61
CCT2	YIL142W	THI22	Q06490	572 aa		11.26	□□□□□ -0.61
CCT2	YIL142W	USO1	P25386	1790 aa		11.26	□□□□□ -0.61
CCT2	YIL142W	PDI1	P17967	522 aa	Known RBP	11.25	□□□□□ -0.61
CCT2	YIL142W	BUD27	P43573	796 aa	Known RBP RIP-Chip data	11.25	□□□□□ -0.61	not detected
CCT2	YIL142W	PPH3	P32345	308 aa		11.24	□□□□□ -0.61
CCT2	YIL142W	YIL092W	P40497	633 aa		11.24	□□□□□ -0.61
CCT2	YIL142W	YPR148C	Q06523	435 aa		11.24	□□□□□ -0.61
CCT2	YIL142W	HEF3	P53978	1044 aa	Known RBP	11.24	□□□□□ -0.61
CCT2	YIL142W	SIR4	P11978	1358 aa		11.23	□□□□□ -0.61
CCT2	YIL142W	PAP2	P53632	584 aa	Known RBP	11.23	□□□□□ -0.61
CCT2	YIL142W	AUS1	Q08409	1394 aa		11.22	□□□□□ -0.61
CCT2	YIL142W	DAL5	P15365	543 aa		11.22	□□□□□ -0.61
CCT2	YIL142W	MAK10	Q02197	733 aa		11.22	□□□□□ -0.61
CCT2	YIL142W	HIM1	Q06674	414 aa		11.22	□□□□□ -0.61
CCT2	YIL142W	RIA1	P53893	1110 aa		11.21	□□□□□ -0.61
CCT2	YIL142W	TY1B-NL2	Q99337	1749 aa	Known RBP	11.2	□□□□□ -0.62
CCT2	YIL142W	LEU2	P04173	364 aa	Predicted RBP	11.2	□□□□□ -0.62
CCT2	YIL142W	GRX4	P32642	244 aa		11.2	□□□□□ -0.62
CCT2	YIL142W	POL32	P47110	350 aa		11.2	□□□□□ -0.62
CCT2	YIL142W	YRF1-4	O13559	1382 aa		11.19	□□□□□ -0.62
CCT2	YIL142W	RTF1	P53064	558 aa		11.19	□□□□□ -0.62
CCT2	YIL142W	RTT109	Q07794	436 aa		11.18	□□□□□ -0.62
CCT2	YIL142W	MTR4	P47047	1073 aa	Known RBP	11.17	□□□□□ -0.62
CCT2	YIL142W	CSE4	P36012	229 aa		11.16	□□□□□ -0.62
CCT2	YIL142W	SNF7	P39929	240 aa	Known RBP	11.16	□□□□□ -0.62
CCT2	YIL142W	MAK21	Q12176	1025 aa	Known RBP	11.16	□□□□□ -0.62
CCT2	YIL142W	CPS1	P27614	576 aa		11.16	□□□□□ -0.62
CCT2	YIL142W	RPO41	P13433	1351 aa	Known RBP	11.14	□□□□□ -0.63
CCT2	YIL142W	PCT1	P13259	424 aa		11.12	□□□□□ -0.63
CCT2	YIL142W	APC1	P53886	1748 aa		11.12	□□□□□ -0.63
CCT2	YIL142W	PUF6	Q04373	656 aa	Known RBP	11.11	□□□□□ -0.63
CCT2	YIL142W	ROX1	P25042	368 aa		11.1	□□□□□ -0.63
CCT2	YIL142W	YNR029C	P53729	429 aa	Known RBP	11.08	□□□□□ -0.64
CCT2	YIL142W	ADE6	P38972	1358 aa	Known RBP	11.06	□□□□□ -0.64
CCT2	YIL142W	CAB3	P36076	571 aa		11.06	□□□□□ -0.64
CCT2	YIL142W	PRP43	P53131	767 aa	Known RBP	11.06	□□□□□ -0.64
CCT2	YIL142W	GAS4	Q08271	471 aa		11.06	□□□□□ -0.64
CCT2	YIL142W	RPS24A	P0CX31	135 aa	Known RBP	11.05	□□□□□ -0.64
CCT2	YIL142W	RPS24B	P0CX32	135 aa	Known RBP	11.05	□□□□□ -0.64
CCT2	YIL142W	VPS24	P36095	224 aa	Known RBP	11.04	□□□□□ -0.64
CCT2	YIL142W	AKL1	P38080	1108 aa	Known RBP	11.04	□□□□□ -0.64
CCT2	YIL142W	TRP5	P00931	707 aa	Known RBP	11.03	□□□□□ -0.64
CCT2	YIL142W	DJP1	P40564	432 aa		11.03	□□□□□ -0.64
CCT2	YIL142W	YMR196W	Q04336	1088 aa		11.03	□□□□□ -0.64
CCT2	YIL142W	DPS1	P04802	557 aa	Known RBP	11.03	□□□□□ -0.64
CCT2	YIL142W	BUB1	P41695	1021 aa	Known RBP RIP-Chip data	11.03	□□□□□ -0.64	not detected
CCT2	YIL142W	GYP7	P48365	746 aa		11.03	□□□□□ -0.64
CCT2	YIL142W	DSD1	P53095	428 aa		11.02	□□□□□ -0.65
CCT2	YIL142W	ECM16	Q04217	1267 aa	Known RBP	11.02	□□□□□ -0.65
CCT2	YIL142W	YRF1-2	P40105	1681 aa		11.01	□□□□□ -0.65
CCT2	YIL142W	YNL050C	P53952	270 aa		11.01	□□□□□ -0.65
CCT2	YIL142W	LSP1	Q12230	341 aa	Known RBP	11	□□□□□ -0.65
CCT2	YIL142W	TY4B-H	P0C2J7	1802 aa		11	□□□□□ -0.65
CCT2	YIL142W	TY4B-J	P47024	1803 aa		11	□□□□□ -0.65
CCT2	YIL142W	RRP5	Q05022	1729 aa	Known RBP	11	□□□□□ -0.65
CCT2	YIL142W	RRT14	P40470	206 aa		10.99	□□□□□ -0.65
CCT2	YIL142W	YIL177C	P40434	1758 aa		10.98	□□□□□ -0.65
CCT2	YIL142W	YJL225C	P40889	1758 aa		10.98	□□□□□ -0.65
CCT2	YIL142W	MSP1	P28737	362 aa		10.98	□□□□□ -0.65
CCT2	YIL142W	SLN1	P39928	1220 aa	Predicted RBP	10.98	□□□□□ -0.65
CCT2	YIL142W	MAM1	P40065	302 aa		10.98	□□□□□ -0.65
CCT2	YIL142W	ZDS1	P50111	915 aa	Known RBP	10.98	□□□□□ -0.65
CCT2	YIL142W	RLF2	Q12495	606 aa		10.98	□□□□□ -0.65

Retrieved 100 of 5,963 RNA–protein pairs in 1236.7 ms