RNA–Protein interactions for RNA: YGR006W

PRP18, Transcript of Splicing factor and component of snRNP U5, yeastyeast

Gene PRP18, Length 756 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRP18YGR006W HST2P53686 357 aa7□□□□□ -1.29
PRP18YGR006W FPK1P53739 893 aa7□□□□□ -1.29
PRP18YGR006W GLN1P32288 370 aaKnown RBP6.99□□□□□ -1.29
PRP18YGR006W NUD1P32336 851 aa6.99□□□□□ -1.29
PRP18YGR006W TFB3Q03290 321 aa6.99□□□□□ -1.29
PRP18YGR006W SIT4P20604 311 aa6.98□□□□□ -1.29
PRP18YGR006W MMP1Q12372 583 aa6.97□□□□□ -1.29
PRP18YGR006W KTR1P27810 393 aaKnown RBP6.96□□□□□ -1.3
PRP18YGR006W STR2P47164 639 aa6.96□□□□□ -1.3
PRP18YGR006W TYW1Q08960 810 aaKnown RBP6.96□□□□□ -1.3
PRP18YGR006W RLF2Q12495 606 aa6.96□□□□□ -1.3
PRP18YGR006W NPL4P33755 580 aa6.95□□□□□ -1.3
PRP18YGR006W ISM1P48526 1002 aa6.95□□□□□ -1.3
PRP18YGR006W RTF1P53064 558 aa6.95□□□□□ -1.3
PRP18YGR006W XDJ1P39102 459 aa6.94□□□□□ -1.3
PRP18YGR006W GYP1Q08484 637 aa6.94□□□□□ -1.3
PRP18YGR006W BUD20Q08004 166 aaPredicted RBP6.93□□□□□ -1.3
PRP18YGR006W YNL115CP53925 644 aa6.92□□□□□ -1.3
PRP18YGR006W ESS1P22696 170 aa6.91□□□□□ -1.3
PRP18YGR006W SCJ1P25303 377 aa6.91□□□□□ -1.3
PRP18YGR006W PKH3Q03306 898 aaPredicted RBP6.91□□□□□ -1.3
PRP18YGR006W PRT1P06103 763 aaKnown RBP6.9□□□□□ -1.3
PRP18YGR006W KEX2P13134 814 aa6.9□□□□□ -1.3
PRP18YGR006W SLY41P22215 453 aa6.9□□□□□ -1.3
PRP18YGR006W PKC1P24583 1151 aa6.89□□□□□ -1.31
PRP18YGR006W GCD11P32481 527 aaKnown RBP6.89□□□□□ -1.31
PRP18YGR006W TY1A-DR4O74302 440 aa6.88□□□□□ -1.31
PRP18YGR006W TY1A-HP0C2I4 478 aaKnown RBP6.88□□□□□ -1.31
PRP18YGR006W TY1A-AP0CX57 440 aa6.88□□□□□ -1.31
PRP18YGR006W TY1A-PR1P0CX58 440 aa6.88□□□□□ -1.31
PRP18YGR006W TY1A-ORP0CX59 440 aa6.88□□□□□ -1.31
PRP18YGR006W TY1A-PR2P0CX60 440 aa6.88□□□□□ -1.31
PRP18YGR006W TY1A-DR5P0CX65 440 aa6.88□□□□□ -1.31
PRP18YGR006W TY1A-ER2P0CX66 440 aa6.88□□□□□ -1.31
PRP18YGR006W TY1A-GR3P0CX67 440 aa6.88□□□□□ -1.31
PRP18YGR006W TY1A-LR1P0CX68 440 aa6.88□□□□□ -1.31
PRP18YGR006W TY1A-MR2P0CX69 440 aa6.88□□□□□ -1.31
PRP18YGR006W TY1A-JR2P47099 440 aa6.88□□□□□ -1.31
PRP18YGR006W TY1A-DR1Q03856 440 aa6.88□□□□□ -1.31
PRP18YGR006W TY1A-ML1Q04706 440 aaKnown RBP6.88□□□□□ -1.31
PRP18YGR006W TY1A-BRQ12217 440 aa6.88□□□□□ -1.31
PRP18YGR006W RAD59Q12223 238 aa6.88□□□□□ -1.31
PRP18YGR006W TY1A-NL2Q12470 440 aa6.88□□□□□ -1.31
PRP18YGR006W TY1A-GR2Q12485 440 aa6.88□□□□□ -1.31
PRP18YGR006W YBL036CP38197 257 aa6.87□□□□□ -1.31
PRP18YGR006W ERF2Q06551 359 aa6.87□□□□□ -1.31
PRP18YGR006W YJU3P28321 313 aa6.86□□□□□ -1.31
PRP18YGR006W CSE4P36012 229 aa6.86□□□□□ -1.31
PRP18YGR006W LAM6Q08001 693 aa6.86□□□□□ -1.31
PRP18YGR006W SEC2P17065 759 aa6.85□□□□□ -1.31
PRP18YGR006W ARG8P18544 423 aa6.85□□□□□ -1.31
PRP18YGR006W YJL007CP47080 104 aa6.85□□□□□ -1.31
PRP18YGR006W SAS4Q04003 481 aa6.85□□□□□ -1.31
PRP18YGR006W BUB1P41695 1021 aaKnown RBP RIP-Chip data6.84□□□□□ -1.31not detected
PRP18YGR006W PUS6P53294 404 aa6.83□□□□□ -1.32
PRP18YGR006W RSC30P38781 883 aa6.82□□□□□ -1.32
PRP18YGR006W BIM1P40013 344 aa6.82□□□□□ -1.32
PRP18YGR006W RRN7P40992 514 aa6.82□□□□□ -1.32
PRP18YGR006W TBF1Q02457 562 aa6.82□□□□□ -1.32
PRP18YGR006W DPS1P04802 557 aaKnown RBP6.81□□□□□ -1.32
PRP18YGR006W TRM1P15565 570 aaKnown RBP6.81□□□□□ -1.32
PRP18YGR006W SPT16P32558 1035 aaKnown RBP6.81□□□□□ -1.32
PRP18YGR006W SDH2P21801 266 aa6.8□□□□□ -1.32
PRP18YGR006W RPL34BP40525 121 aaKnown RBP6.8□□□□□ -1.32
PRP18YGR006W SPT5P27692 1063 aaKnown RBP6.79□□□□□ -1.32
PRP18YGR006W ATG32P40458 529 aa6.78□□□□□ -1.32
PRP18YGR006W MAK16P10962 306 aaPredicted RBP6.77□□□□□ -1.33
PRP18YGR006W PAT1P25644 796 aaKnown RBP6.77□□□□□ -1.33
PRP18YGR006W MRF1P30775 413 aaPredicted RBP6.77□□□□□ -1.33
PRP18YGR006W BIO2P32451 375 aa6.77□□□□□ -1.33
PRP18YGR006W TUB4P53378 473 aa6.77□□□□□ -1.33
PRP18YGR006W ERG12P07277 443 aa6.76□□□□□ -1.33
PRP18YGR006W AGE1Q04412 482 aa6.76□□□□□ -1.33
PRP18YGR006W RAS1P01119 309 aa6.75□□□□□ -1.33
PRP18YGR006W TIF1P10081 395 aaKnown RBP6.75□□□□□ -1.33
PRP18YGR006W PAC1P39946 494 aaKnown RBP6.75□□□□□ -1.33
PRP18YGR006W AMS1P22855 1083 aa6.74□□□□□ -1.33
PRP18YGR006W RPA14P50106 137 aa6.74□□□□□ -1.33
PRP18YGR006W YNL108CP53929 270 aa6.74□□□□□ -1.33
PRP18YGR006W YDL206WQ12424 762 aa6.74□□□□□ -1.33
PRP18YGR006W YEL077CQ3E7X8 1277 aa6.74□□□□□ -1.33
PRP18YGR006W NAF1P53919 492 aaKnown RBP6.73□□□□□ -1.33
PRP18YGR006W SUP45P12385 437 aaKnown RBP6.72□□□□□ -1.33
PRP18YGR006W KXD1P53158 218 aa6.72□□□□□ -1.33
PRP18YGR006W YPR097WQ06839 1073 aa6.72□□□□□ -1.33
PRP18YGR006W ALR1Q08269 859 aa6.72□□□□□ -1.33
PRP18YGR006W RTG2P32608 588 aaKnown RBP6.71□□□□□ -1.34
PRP18YGR006W CST6P40535 587 aa6.7□□□□□ -1.34
PRP18YGR006W YPP1P46951 817 aa6.7□□□□□ -1.34
PRP18YGR006W FRK1Q03002 865 aaPredicted RBP6.69□□□□□ -1.34
PRP18YGR006W YDJ1P25491 409 aaKnown RBP6.68□□□□□ -1.34
PRP18YGR006W YPR204WQ08995 1032 aa6.68□□□□□ -1.34
PRP18YGR006W PDC1P06169 563 aaKnown RBP6.67□□□□□ -1.34
PRP18YGR006W BDP1P46678 594 aa6.67□□□□□ -1.34
PRP18YGR006W ENO2P00925 437 aaKnown RBP6.66□□□□□ -1.34
PRP18YGR006W HXT10P43581 546 aa6.66□□□□□ -1.34
PRP18YGR006W SSA4P22202 642 aaKnown RBP6.65□□□□□ -1.34
PRP18YGR006W TPD3P31383 635 aa6.65□□□□□ -1.34
PRP18YGR006W SIS2P36024 562 aa6.65□□□□□ -1.34
PRP18YGR006W TEC1P18412 486 aa6.64□□□□□ -1.35
Retrieved 100 of 5,963 RNA–protein pairs in 9.3 ms