RNA–Protein interactions for RNA: YFL003C

MSH4, Transcript of Protein involved in meiotic recombination, yeastyeast

Gene MSH4, Length 2,637 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSH4YFL003C PUP1P25043 261 aa4.89□□□□□ -1.63
MSH4YFL003C CSE4P36012 229 aa4.89□□□□□ -1.63
MSH4YFL003C ENO1P00924 437 aaKnown RBP4.89□□□□□ -1.63
MSH4YFL003C RIM21P48565 533 aa4.89□□□□□ -1.63
MSH4YFL003C EAP1P36041 632 aaKnown RBP4.88□□□□□ -1.63
MSH4YFL003C SLX8P40072 274 aa4.88□□□□□ -1.63
MSH4YFL003C AGE1Q04412 482 aa4.88□□□□□ -1.63
MSH4YFL003C YPR204WQ08995 1032 aa4.88□□□□□ -1.63
MSH4YFL003C YRR1Q12172 810 aa4.88□□□□□ -1.63
MSH4YFL003C MAK16P10962 306 aaPredicted RBP4.88□□□□□ -1.63
MSH4YFL003C SEC2P17065 759 aa4.88□□□□□ -1.63
MSH4YFL003C TIF11P38912 153 aaKnown RBP4.88□□□□□ -1.63
MSH4YFL003C ULI1P43604 169 aa4.88□□□□□ -1.63
MSH4YFL003C PDR1P12383 1068 aa4.87□□□□□ -1.63
MSH4YFL003C NMA111P53920 997 aa4.87□□□□□ -1.63
MSH4YFL003C YMR196WQ04336 1088 aa4.87□□□□□ -1.63
MSH4YFL003C TY1A-DR4O74302 440 aa4.86□□□□□ -1.63
MSH4YFL003C TY1A-HP0C2I4 478 aaKnown RBP4.86□□□□□ -1.63
MSH4YFL003C TY1A-AP0CX57 440 aa4.86□□□□□ -1.63
MSH4YFL003C TY1A-PR1P0CX58 440 aa4.86□□□□□ -1.63
MSH4YFL003C TY1A-ORP0CX59 440 aa4.86□□□□□ -1.63
MSH4YFL003C TY1A-PR2P0CX60 440 aa4.86□□□□□ -1.63
MSH4YFL003C TY1A-DR5P0CX65 440 aa4.86□□□□□ -1.63
MSH4YFL003C TY1A-ER2P0CX66 440 aa4.86□□□□□ -1.63
MSH4YFL003C TY1A-GR3P0CX67 440 aa4.86□□□□□ -1.63
MSH4YFL003C TY1A-LR1P0CX68 440 aa4.86□□□□□ -1.63
MSH4YFL003C TY1A-MR2P0CX69 440 aa4.86□□□□□ -1.63
MSH4YFL003C KEX2P13134 814 aa4.86□□□□□ -1.63
MSH4YFL003C ARG8P18544 423 aa4.86□□□□□ -1.63
MSH4YFL003C SLY41P22215 453 aa4.86□□□□□ -1.63
MSH4YFL003C PEP12P32854 288 aa4.86□□□□□ -1.63
MSH4YFL003C TY1A-JR2P47099 440 aa4.86□□□□□ -1.63
MSH4YFL003C STR2P47164 639 aa4.86□□□□□ -1.63
MSH4YFL003C PEX29Q03370 554 aa4.86□□□□□ -1.63
MSH4YFL003C TY1A-DR1Q03856 440 aa4.86□□□□□ -1.63
MSH4YFL003C TY1A-ML1Q04706 440 aaKnown RBP4.86□□□□□ -1.63
MSH4YFL003C TY1A-BRQ12217 440 aa4.86□□□□□ -1.63
MSH4YFL003C TY1A-NL2Q12470 440 aa4.86□□□□□ -1.63
MSH4YFL003C TY1A-GR2Q12485 440 aa4.86□□□□□ -1.63
MSH4YFL003C RAM1P22007 431 aa4.86□□□□□ -1.63
MSH4YFL003C YNL115CP53925 644 aa4.86□□□□□ -1.63
MSH4YFL003C SSA4P22202 642 aaKnown RBP4.85□□□□□ -1.63
MSH4YFL003C TRM1P15565 570 aaKnown RBP4.85□□□□□ -1.63
MSH4YFL003C YNL035CP53962 389 aaKnown RBP4.84□□□□□ -1.63
MSH4YFL003C RTF1P53064 558 aa4.84□□□□□ -1.63
MSH4YFL003C ISU2Q12056 156 aa4.84□□□□□ -1.63
MSH4YFL003C LDB19Q12502 818 aa4.83□□□□□ -1.64
MSH4YFL003C ISM1P48526 1002 aa4.83□□□□□ -1.64
MSH4YFL003C SPP1Q03012 353 aa4.83□□□□□ -1.64
MSH4YFL003C NUD1P32336 851 aa4.82□□□□□ -1.64
MSH4YFL003C RTG1P32607 177 aa4.81□□□□□ -1.64
MSH4YFL003C TGL4P36165 910 aa4.81□□□□□ -1.64
MSH4YFL003C BUB1P41695 1021 aaKnown RBP RIP-Chip data4.81□□□□□ -1.64not detected
MSH4YFL003C YPR015CQ12531 247 aa4.81□□□□□ -1.64
MSH4YFL003C PEX21P50091 288 aa4.81□□□□□ -1.64
MSH4YFL003C SEN54Q02825 467 aaPredicted RBP4.81□□□□□ -1.64
MSH4YFL003C YPR084WQ06821 456 aa4.81□□□□□ -1.64
MSH4YFL003C LAM6Q08001 693 aa4.81□□□□□ -1.64
MSH4YFL003C SEC61P32915 480 aa4.8□□□□□ -1.64
MSH4YFL003C MRX12P47084 519 aa4.8□□□□□ -1.64
MSH4YFL003C ISF1P32488 338 aa4.79□□□□□ -1.64
MSH4YFL003C TPS3P38426 1054 aaKnown RBP4.79□□□□□ -1.64
MSH4YFL003C RPL34BP40525 121 aaKnown RBP4.79□□□□□ -1.64
MSH4YFL003C TUB4P53378 473 aa4.79□□□□□ -1.64
MSH4YFL003C BUD20Q08004 166 aaPredicted RBP4.79□□□□□ -1.64
MSH4YFL003C RPP1BP10622 106 aaKnown RBP4.79□□□□□ -1.64
MSH4YFL003C PUS6P53294 404 aa4.79□□□□□ -1.64
MSH4YFL003C SPT5P27692 1063 aaKnown RBP4.78□□□□□ -1.64
MSH4YFL003C APL6P46682 809 aa4.78□□□□□ -1.64
MSH4YFL003C MCM16Q12262 181 aa4.78□□□□□ -1.64
MSH4YFL003C NAF1P53919 492 aaKnown RBP4.77□□□□□ -1.65
MSH4YFL003C SSF1P38789 453 aaPredicted RBP4.76□□□□□ -1.65
MSH4YFL003C PAC1P39946 494 aaKnown RBP4.76□□□□□ -1.65
MSH4YFL003C ARH1P48360 493 aa4.76□□□□□ -1.65
MSH4YFL003C YDL206WQ12424 762 aa4.76□□□□□ -1.65
MSH4YFL003C FIG4P42837 879 aa4.75□□□□□ -1.65
MSH4YFL003C EMP47P43555 445 aa4.75□□□□□ -1.65
MSH4YFL003C HAP5Q02516 242 aa4.75□□□□□ -1.65
MSH4YFL003C YDL129WQ07555 291 aa4.75□□□□□ -1.65
MSH4YFL003C NCR1Q12200 1170 aa4.75□□□□□ -1.65
MSH4YFL003C ECM23Q02710 187 aa4.74□□□□□ -1.65
MSH4YFL003C TRL1P09880 827 aaKnown RBP4.73□□□□□ -1.65
MSH4YFL003C CDC3P32457 520 aaKnown RBP4.73□□□□□ -1.65
MSH4YFL003C YPR097WQ06839 1073 aa4.73□□□□□ -1.65
MSH4YFL003C FRA1Q07825 749 aa4.73□□□□□ -1.65
MSH4YFL003C FKH1P40466 484 aa4.73□□□□□ -1.65
MSH4YFL003C PDC1P06169 563 aaKnown RBP4.72□□□□□ -1.65
MSH4YFL003C CWC15Q03772 175 aaKnown RBP4.72□□□□□ -1.65
MSH4YFL003C ITT1Q04638 464 aa4.72□□□□□ -1.65
MSH4YFL003C MOD5P07884 428 aa4.72□□□□□ -1.65
MSH4YFL003C SIS2P36024 562 aa4.72□□□□□ -1.65
MSH4YFL003C RPA14P50106 137 aa4.72□□□□□ -1.65
MSH4YFL003C HAT1Q12341 374 aa4.72□□□□□ -1.65
MSH4YFL003C KTR7P40504 517 aa4.71□□□□□ -1.66
MSH4YFL003C GAL2P13181 574 aa4.71□□□□□ -1.66
MSH4YFL003C ROM1P53046 1155 aa4.71□□□□□ -1.66
MSH4YFL003C BNI4P53858 892 aa4.71□□□□□ -1.66
MSH4YFL003C AIR2Q12476 344 aaKnown RBP4.71□□□□□ -1.66
MSH4YFL003C SAP30P38429 201 aa4.7□□□□□ -1.66
MSH4YFL003C HAL5P38970 855 aaKnown RBP4.7□□□□□ -1.66
Retrieved 100 of 5,963 RNA–protein pairs in 13.2 ms