RNA–Protein interactions for RNA: YER165W

PAB1, Transcript of Poly(A) binding protein, yeastyeast

Gene PAB1, Length 1,734 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PAB1YER165W MVP1P40959 511 aaKnown RBP11.4□□□□□ -0.58
PAB1YER165W HST2P53686 357 aa11.4□□□□□ -0.58
PAB1YER165W YPR204WQ08995 1032 aa11.4□□□□□ -0.58
PAB1YER165W RTG2P32608 588 aaKnown RBP11.4□□□□□ -0.58
PAB1YER165W TGL3P40308 642 aa11.4□□□□□ -0.58
PAB1YER165W NIS1P53939 407 aa11.4□□□□□ -0.58
PAB1YER165W RKR1Q04781 1562 aa11.39□□□□□ -0.59
PAB1YER165W PAN1P32521 1480 aa11.39□□□□□ -0.59
PAB1YER165W CSE4P36012 229 aa11.39□□□□□ -0.59
PAB1YER165W LTE1P07866 1435 aa11.38□□□□□ -0.59
PAB1YER165W FPK1P53739 893 aa11.38□□□□□ -0.59
PAB1YER165W NOB1Q08444 459 aaKnown RBP11.37□□□□□ -0.59
PAB1YER165W RAD59Q12223 238 aa11.37□□□□□ -0.59
PAB1YER165W RPL34AP87262 121 aaPredicted RBP11.36□□□□□ -0.59
PAB1YER165W GAP1P19145 602 aaPredicted RBP11.35□□□□□ -0.59
PAB1YER165W MRX12P47084 519 aa11.35□□□□□ -0.59
PAB1YER165W SLD2P34252 453 aa11.35□□□□□ -0.59
PAB1YER165W YMR196WQ04336 1088 aa11.35□□□□□ -0.59
PAB1YER165W YNL108CP53929 270 aa11.34□□□□□ -0.59
PAB1YER165W ORC1P54784 914 aaPredicted RBP11.34□□□□□ -0.59
PAB1YER165W RPA190P10964 1664 aaKnown RBP11.34□□□□□ -0.59
PAB1YER165W CDC3P32457 520 aaKnown RBP11.33□□□□□ -0.6
PAB1YER165W PKH3Q03306 898 aaPredicted RBP11.33□□□□□ -0.6
PAB1YER165W MMP1Q12372 583 aa11.33□□□□□ -0.6
PAB1YER165W AI4P03878 556 aa11.32□□□□□ -0.6
PAB1YER165W TOP2P06786 1428 aaKnown RBP11.31□□□□□ -0.6
PAB1YER165W MPH3P0CE00 602 aa11.31□□□□□ -0.6
PAB1YER165W SUP45P12385 437 aaKnown RBP11.31□□□□□ -0.6
PAB1YER165W ILV3P39522 585 aaKnown RBP11.31□□□□□ -0.6
PAB1YER165W ESS1P22696 170 aa11.3□□□□□ -0.6
PAB1YER165W DCW1P36091 449 aa11.3□□□□□ -0.6
PAB1YER165W CSC1Q06538 782 aa11.3□□□□□ -0.6
PAB1YER165W TY2B-BQ12491 1770 aa11.3□□□□□ -0.6
PAB1YER165W TY1B-HO13535 1793 aa11.28□□□□□ -0.6
PAB1YER165W TY1B-DR5P0C2I2 1755 aa11.28□□□□□ -0.6
PAB1YER165W TY1B-DR6P0C2I3 1755 aa11.28□□□□□ -0.6
PAB1YER165W TY1B-LR2P0C2I5 1755 aa11.28□□□□□ -0.6
PAB1YER165W TY1B-LR3P0C2I6 1755 aaKnown RBP11.28□□□□□ -0.6
PAB1YER165W TY1B-PR1P0C2I9 1755 aaKnown RBP11.28□□□□□ -0.6
PAB1YER165W TY1B-PR2P0C2J0 1756 aa11.28□□□□□ -0.6
PAB1YER165W TY1B-PR3P0C2J1 1755 aaKnown RBP11.28□□□□□ -0.6
PAB1YER165W TY1B-JR1P47098 1755 aa11.28□□□□□ -0.6
PAB1YER165W TY1B-ML2Q03434 1755 aaKnown RBP11.28□□□□□ -0.6
PAB1YER165W TY1B-ER1Q03612 1755 aa11.28□□□□□ -0.6
PAB1YER165W TY1B-ML1Q04711 1755 aaKnown RBP11.28□□□□□ -0.6
PAB1YER165W TY1B-GR2Q12269 1755 aa11.28□□□□□ -0.6
PAB1YER165W TY1B-OLQ12273 1755 aa11.28□□□□□ -0.6
PAB1YER165W TY1B-PLQ12414 1755 aaKnown RBP11.28□□□□□ -0.6
PAB1YER165W SCJ1P25303 377 aa11.27□□□□□ -0.61
PAB1YER165W YPR109WQ06104 294 aa11.26□□□□□ -0.61
PAB1YER165W MMS22Q06164 1454 aa11.26□□□□□ -0.61
PAB1YER165W BNI1P41832 1953 aa11.26□□□□□ -0.61
PAB1YER165W TY1B-DR3Q99231 1755 aa11.26□□□□□ -0.61
PAB1YER165W GEA2P39993 1459 aaKnown RBP11.26□□□□□ -0.61
PAB1YER165W SIS2P36024 562 aa11.26□□□□□ -0.61
PAB1YER165W SSF1P38789 453 aaPredicted RBP11.26□□□□□ -0.61
PAB1YER165W SIT4P20604 311 aa11.25□□□□□ -0.61
PAB1YER165W YJU3P28321 313 aa11.25□□□□□ -0.61
PAB1YER165W MST1P07236 462 aa11.24□□□□□ -0.61
PAB1YER165W PUP1P25043 261 aa11.24□□□□□ -0.61
PAB1YER165W NOP7P53261 605 aaKnown RBP11.24□□□□□ -0.61
PAB1YER165W HTA1P04911 132 aaKnown RBP11.23□□□□□ -0.61
PAB1YER165W HTA2P04912 132 aa11.23□□□□□ -0.61
PAB1YER165W RPP1BP10622 106 aaKnown RBP11.23□□□□□ -0.61
PAB1YER165W YOL036WQ08206 761 aa11.23□□□□□ -0.61
PAB1YER165W TRM732Q03496 1420 aa11.23□□□□□ -0.61
PAB1YER165W SPT5P27692 1063 aaKnown RBP11.23□□□□□ -0.61
PAB1YER165W SLI15P38283 698 aa11.22□□□□□ -0.61
PAB1YER165W YML083CQ04526 418 aa11.22□□□□□ -0.61
PAB1YER165W ENO1P00924 437 aaKnown RBP11.21□□□□□ -0.61
PAB1YER165W ENO2P00925 437 aaKnown RBP11.21□□□□□ -0.61
PAB1YER165W ARG8P18544 423 aa11.21□□□□□ -0.61
PAB1YER165W GTT3P39996 337 aa11.21□□□□□ -0.61
PAB1YER165W SNU71P53207 620 aaKnown RBP11.21□□□□□ -0.62
PAB1YER165W ITT1Q04638 464 aa11.21□□□□□ -0.62
PAB1YER165W MRX10Q05648 414 aa11.21□□□□□ -0.62
PAB1YER165W SEN54Q02825 467 aaPredicted RBP11.2□□□□□ -0.62
PAB1YER165W TFB4Q12004 338 aa11.2□□□□□ -0.62
PAB1YER165W YDJ1P25491 409 aaKnown RBP11.19□□□□□ -0.62
PAB1YER165W RIM21P48565 533 aa11.18□□□□□ -0.62
PAB1YER165W MAK16P10962 306 aaPredicted RBP11.17□□□□□ -0.62
PAB1YER165W RSC30P38781 883 aa11.17□□□□□ -0.62
PAB1YER165W SET4P42948 560 aa11.17□□□□□ -0.62
PAB1YER165W POL1P13382 1468 aa11.16□□□□□ -0.62
PAB1YER165W DAN4P47179 1161 aa11.16□□□□□ -0.62
PAB1YER165W HEM3P28789 327 aa11.15□□□□□ -0.62
PAB1YER165W HAT1Q12341 374 aa11.15□□□□□ -0.62
PAB1YER165W TGL4P36165 910 aa11.13□□□□□ -0.63
PAB1YER165W CDC73Q06697 393 aa11.13□□□□□ -0.63
PAB1YER165W MMS1Q06211 1407 aa11.12□□□□□ -0.63
PAB1YER165W NUP159P40477 1460 aa11.12□□□□□ -0.63
PAB1YER165W LAM6Q08001 693 aa11.12□□□□□ -0.63
PAB1YER165W YRF1-1P0CX20 1796 aa11.11□□□□□ -0.63
PAB1YER165W YRF1-5P0CX21 1796 aa11.11□□□□□ -0.63
PAB1YER165W YRF1-8P0CX22 1796 aa11.11□□□□□ -0.63
PAB1YER165W SMC4Q12267 1418 aa11.11□□□□□ -0.63
PAB1YER165W YOR1P53049 1477 aa11.1□□□□□ -0.63
PAB1YER165W SPP41P38904 1435 aa11.1□□□□□ -0.63
PAB1YER165W YEL023CP39992 682 aa11.1□□□□□ -0.63
PAB1YER165W VPS15P22219 1454 aa11.1□□□□□ -0.63
Retrieved 100 of 5,963 RNA–protein pairs in 29.7 ms