RNA–Protein interactions for RNA: YDR477W

SNF1, Transcript of AMP-activated serine/threonine protein kinase, yeastyeast

Gene SNF1, Length 1,902 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNF1YDR477W YRB30P53107 440 aaPredicted RBP12.66□□□□□ -0.38
SNF1YDR477W IOC4Q04213 475 aa12.64□□□□□ -0.39
SNF1YDR477W YAP3P38749 330 aa12.64□□□□□ -0.39
SNF1YDR477W MPP10P47083 593 aaKnown RBP12.64□□□□□ -0.39
SNF1YDR477W MET5P47169 1442 aa12.63□□□□□ -0.39
SNF1YDR477W FKH1P40466 484 aa12.62□□□□□ -0.39
SNF1YDR477W SCT1P32784 759 aa12.62□□□□□ -0.39
SNF1YDR477W NAB6Q03735 1134 aaKnown RBP RIP-Chip data12.6□□□□□ -0.39not detected
SNF1YDR477W MTC1P47018 478 aaKnown RBP12.59□□□□□ -0.39
SNF1YDR477W ROX1P25042 368 aa12.58□□□□□ -0.4
SNF1YDR477W CHZ1P40019 153 aaPredicted RBP12.58□□□□□ -0.4
SNF1YDR477W TAF8Q03750 510 aa12.56□□□□□ -0.4
SNF1YDR477W HAP1P0CE41 1502 aa12.55□□□□□ -0.4
SNF1YDR477W PCT1P13259 424 aa12.54□□□□□ -0.4
SNF1YDR477W RRP46P53256 223 aaPredicted RBP12.54□□□□□ -0.4
SNF1YDR477W YML133CQ03099 1374 aa12.53□□□□□ -0.4
SNF1YDR477W YLL067CQ07888 1374 aa12.53□□□□□ -0.4
SNF1YDR477W YLL066CQ99208 1374 aa12.53□□□□□ -0.4
SNF1YDR477W BCK1Q01389 1478 aa12.53□□□□□ -0.4
SNF1YDR477W DJP1P40564 432 aa12.52□□□□□ -0.4
SNF1YDR477W RAD9P14737 1309 aa12.52□□□□□ -0.41
SNF1YDR477W SAP155P43612 1002 aa12.51□□□□□ -0.41
SNF1YDR477W TCB2P48231 1178 aa12.5□□□□□ -0.41
SNF1YDR477W RAD2P07276 1031 aa12.49□□□□□ -0.41
SNF1YDR477W RTR1P40084 226 aaPredicted RBP12.49□□□□□ -0.41
SNF1YDR477W SLN1P39928 1220 aaPredicted RBP12.48□□□□□ -0.41
SNF1YDR477W DAL5P15365 543 aa12.47□□□□□ -0.41
SNF1YDR477W TYS1P36421 394 aaKnown RBP12.47□□□□□ -0.41
SNF1YDR477W YIL092WP40497 633 aa12.47□□□□□ -0.41
SNF1YDR477W ALD4P46367 519 aaKnown RBP12.46□□□□□ -0.42
SNF1YDR477W POL32P47110 350 aa12.45□□□□□ -0.42
SNF1YDR477W KRE5P22023 1365 aa12.45□□□□□ -0.42
SNF1YDR477W TRM3Q07527 1436 aa12.45□□□□□ -0.42
SNF1YDR477W TPD3P31383 635 aa12.44□□□□□ -0.42
SNF1YDR477W DNF3Q12674 1656 aa12.44□□□□□ -0.42
SNF1YDR477W THI22Q06490 572 aa12.43□□□□□ -0.42
SNF1YDR477W HEF3P53978 1044 aaKnown RBP12.41□□□□□ -0.42
SNF1YDR477W VPS24P36095 224 aaKnown RBP12.4□□□□□ -0.42
SNF1YDR477W MSP1P28737 362 aa12.39□□□□□ -0.43
SNF1YDR477W MNN4P36044 1178 aa12.39□□□□□ -0.43
SNF1YDR477W CAB1Q04430 367 aa12.39□□□□□ -0.43
SNF1YDR477W PRD1P25375 712 aa12.39□□□□□ -0.43
SNF1YDR477W BUD27P43573 796 aaKnown RBP RIP-Chip data12.39□□□□□ -0.43not detected
SNF1YDR477W IPL1P38991 367 aa12.38□□□□□ -0.43
SNF1YDR477W CSE4P36012 229 aa12.36□□□□□ -0.43
SNF1YDR477W EDE1P34216 1381 aa12.36□□□□□ -0.43
SNF1YDR477W KAR2P16474 682 aaKnown RBP12.35□□□□□ -0.43
SNF1YDR477W PUF6Q04373 656 aaKnown RBP12.34□□□□□ -0.43
SNF1YDR477W RTT109Q07794 436 aa12.34□□□□□ -0.43
SNF1YDR477W RLF2Q12495 606 aa12.34□□□□□ -0.43
SNF1YDR477W SIR4P11978 1358 aa12.33□□□□□ -0.44
SNF1YDR477W KNS1P32350 737 aaPredicted RBP12.33□□□□□ -0.44
SNF1YDR477W LSP1Q12230 341 aaKnown RBP12.31□□□□□ -0.44
SNF1YDR477W ARL1P38116 183 aaKnown RBP12.31□□□□□ -0.44
SNF1YDR477W LEO1P38439 464 aa12.3□□□□□ -0.44
SNF1YDR477W HIM1Q06674 414 aa12.3□□□□□ -0.44
SNF1YDR477W NOT3P06102 836 aaKnown RBP12.29□□□□□ -0.44
SNF1YDR477W NAP1P25293 417 aaKnown RBP12.28□□□□□ -0.44
SNF1YDR477W PAP2P53632 584 aaKnown RBP12.28□□□□□ -0.44
SNF1YDR477W YRF1-4O13559 1382 aa12.28□□□□□ -0.44
SNF1YDR477W AUS1Q08409 1394 aa12.28□□□□□ -0.44
SNF1YDR477W TEA1P47988 759 aa12.27□□□□□ -0.44
SNF1YDR477W CTR9P89105 1077 aa12.26□□□□□ -0.45
SNF1YDR477W TAP42Q04372 366 aa12.26□□□□□ -0.45
SNF1YDR477W MAK21Q12176 1025 aaKnown RBP12.26□□□□□ -0.45
SNF1YDR477W PSK1P31374 1356 aa12.23□□□□□ -0.45
SNF1YDR477W RCM1P53972 490 aa12.23□□□□□ -0.45
SNF1YDR477W PPH3P32345 308 aa12.23□□□□□ -0.45
SNF1YDR477W ILV3P39522 585 aaKnown RBP12.23□□□□□ -0.45
SNF1YDR477W ITC1P53125 1264 aa12.23□□□□□ -0.45
SNF1YDR477W TRP5P00931 707 aaKnown RBP12.22□□□□□ -0.45
SNF1YDR477W USO1P25386 1790 aa12.21□□□□□ -0.45
SNF1YDR477W PDI1P17967 522 aaKnown RBP12.21□□□□□ -0.46
SNF1YDR477W TY1B-NL2Q99337 1749 aaKnown RBP12.19□□□□□ -0.46
SNF1YDR477W SRS2P12954 1174 aa12.19□□□□□ -0.46
SNF1YDR477W URN1Q06525 465 aaKnown RBP12.19□□□□□ -0.46
SNF1YDR477W YPP1P46951 817 aa12.17□□□□□ -0.46
SNF1YDR477W HAP5Q02516 242 aa12.14□□□□□ -0.47
SNF1YDR477W NKP2Q06162 153 aa12.14□□□□□ -0.47
SNF1YDR477W NUP145P49687 1317 aa12.14□□□□□ -0.47
SNF1YDR477W GRX4P32642 244 aa12.13□□□□□ -0.47
SNF1YDR477W DLD1P32891 587 aa12.13□□□□□ -0.47
SNF1YDR477W RAD50P12753 1312 aa12.12□□□□□ -0.47
SNF1YDR477W LEU2P04173 364 aaPredicted RBP12.11□□□□□ -0.47
SNF1YDR477W ECM16Q04217 1267 aaKnown RBP12.11□□□□□ -0.47
SNF1YDR477W RRT14P40470 206 aa12.11□□□□□ -0.47
SNF1YDR477W RPO41P13433 1351 aaKnown RBP12.11□□□□□ -0.47
SNF1YDR477W RTF1P53064 558 aa12.1□□□□□ -0.47
SNF1YDR477W RSC1P53236 928 aa12.1□□□□□ -0.47
SNF1YDR477W GCR2Q01722 534 aa12.09□□□□□ -0.47
SNF1YDR477W LCD1Q04377 747 aa12.09□□□□□ -0.47
SNF1YDR477W BRN1P38170 754 aa12.09□□□□□ -0.47
SNF1YDR477W ROM2P51862 1356 aaKnown RBP12.09□□□□□ -0.47
SNF1YDR477W APC1P53886 1748 aa12.08□□□□□ -0.48
SNF1YDR477W MRX12P47084 519 aa12.08□□□□□ -0.48
SNF1YDR477W NPA3P47122 385 aa12.08□□□□□ -0.48
SNF1YDR477W DSD1P53095 428 aa12.08□□□□□ -0.48
SNF1YDR477W NOP58Q12499 511 aaKnown RBP12.07□□□□□ -0.48
SNF1YDR477W RKM3P38222 552 aa12.07□□□□□ -0.48
SNF1YDR477W SPO1P53541 631 aa12.07□□□□□ -0.48
Retrieved 100 of 5,963 RNA–protein pairs in 32.5 ms