RNA–Protein interactions for RNA: YDR185C

UPS3, Transcript of Mitochondrial protein of unknown function, yeastyeast

Gene UPS3, Length 540 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UPS3YDR185C SPT23P35210 1082 aa8.26□□□□□ -1.09
UPS3YDR185C NOP8Q08287 484 aaPredicted RBP8.25□□□□□ -1.09
UPS3YDR185C CHL1P22516 861 aaPredicted RBP8.24□□□□□ -1.09
UPS3YDR185C CSN12P47130 423 aa8.24□□□□□ -1.09
UPS3YDR185C STR2P47164 639 aa8.24□□□□□ -1.09
UPS3YDR185C HST2P53686 357 aa8.24□□□□□ -1.09
UPS3YDR185C YPR015CQ12531 247 aa8.24□□□□□ -1.09
UPS3YDR185C SLX8P40072 274 aa8.23□□□□□ -1.09
UPS3YDR185C SSA2P10592 639 aaKnown RBP8.22□□□□□ -1.09
UPS3YDR185C ISM1P48526 1002 aa8.22□□□□□ -1.09
UPS3YDR185C YMR196WQ04336 1088 aa8.22□□□□□ -1.09
UPS3YDR185C TYW1Q08960 810 aaKnown RBP8.22□□□□□ -1.09
UPS3YDR185C PTC2P39966 464 aaKnown RBP8.21□□□□□ -1.1
UPS3YDR185C SUB2Q07478 446 aaKnown RBP8.21□□□□□ -1.1
UPS3YDR185C SCJ1P25303 377 aa8.19□□□□□ -1.1
UPS3YDR185C GLN1P32288 370 aaKnown RBP8.19□□□□□ -1.1
UPS3YDR185C RTF1P53064 558 aa8.19□□□□□ -1.1
UPS3YDR185C YML082WQ04533 649 aaKnown RBP8.19□□□□□ -1.1
UPS3YDR185C ERF2Q06551 359 aa8.19□□□□□ -1.1
UPS3YDR185C KEX2P13134 814 aa8.18□□□□□ -1.1
UPS3YDR185C PKC1P24583 1151 aa8.18□□□□□ -1.1
UPS3YDR185C TY1A-DR4O74302 440 aa8.17□□□□□ -1.1
UPS3YDR185C TY1A-HP0C2I4 478 aaKnown RBP8.17□□□□□ -1.1
UPS3YDR185C TY1A-AP0CX57 440 aa8.17□□□□□ -1.1
UPS3YDR185C TY1A-PR1P0CX58 440 aa8.17□□□□□ -1.1
UPS3YDR185C TY1A-ORP0CX59 440 aa8.17□□□□□ -1.1
UPS3YDR185C TY1A-PR2P0CX60 440 aa8.17□□□□□ -1.1
UPS3YDR185C TY1A-DR5P0CX65 440 aa8.17□□□□□ -1.1
UPS3YDR185C TY1A-ER2P0CX66 440 aa8.17□□□□□ -1.1
UPS3YDR185C TY1A-GR3P0CX67 440 aa8.17□□□□□ -1.1
UPS3YDR185C TY1A-LR1P0CX68 440 aa8.17□□□□□ -1.1
UPS3YDR185C TY1A-MR2P0CX69 440 aa8.17□□□□□ -1.1
UPS3YDR185C TY1A-JR2P47099 440 aa8.17□□□□□ -1.1
UPS3YDR185C TY1A-DR1Q03856 440 aa8.17□□□□□ -1.1
UPS3YDR185C TY1A-ML1Q04706 440 aaKnown RBP8.17□□□□□ -1.1
UPS3YDR185C BUD20Q08004 166 aaPredicted RBP8.17□□□□□ -1.1
UPS3YDR185C TY1A-BRQ12217 440 aa8.17□□□□□ -1.1
UPS3YDR185C MMP1Q12372 583 aa8.17□□□□□ -1.1
UPS3YDR185C TY1A-NL2Q12470 440 aa8.17□□□□□ -1.1
UPS3YDR185C TY1A-GR2Q12485 440 aa8.17□□□□□ -1.1
UPS3YDR185C ESS1P22696 170 aa8.16□□□□□ -1.1
UPS3YDR185C YNL115CP53925 644 aa8.16□□□□□ -1.1
UPS3YDR185C SEC2P17065 759 aa8.14□□□□□ -1.11
UPS3YDR185C NPL4P33755 580 aa8.14□□□□□ -1.11
UPS3YDR185C BIM1P40013 344 aa8.14□□□□□ -1.11
UPS3YDR185C YJL007CP47080 104 aa8.14□□□□□ -1.11
UPS3YDR185C SSA4P22202 642 aaKnown RBP8.13□□□□□ -1.11
UPS3YDR185C YJU3P28321 313 aa8.13□□□□□ -1.11
UPS3YDR185C SLY41P22215 453 aa8.12□□□□□ -1.11
UPS3YDR185C RPL34BP40525 121 aaKnown RBP8.12□□□□□ -1.11
UPS3YDR185C PKH3Q03306 898 aaPredicted RBP8.12□□□□□ -1.11
UPS3YDR185C ATG32P40458 529 aa8.11□□□□□ -1.11
UPS3YDR185C AGE1Q04412 482 aa8.1□□□□□ -1.11
UPS3YDR185C GCD11P32481 527 aaKnown RBP8.09□□□□□ -1.11
UPS3YDR185C RAD59Q12223 238 aa8.09□□□□□ -1.11
UPS3YDR185C PRT1P06103 763 aaKnown RBP8.08□□□□□ -1.12
UPS3YDR185C RSC30P38781 883 aa8.08□□□□□ -1.12
UPS3YDR185C ORC1P54784 914 aaPredicted RBP8.08□□□□□ -1.12
UPS3YDR185C TRM1P15565 570 aaKnown RBP8.06□□□□□ -1.12
UPS3YDR185C TUB4P53378 473 aa8.05□□□□□ -1.12
UPS3YDR185C LAM6Q08001 693 aa8.05□□□□□ -1.12
UPS3YDR185C VRP1P37370 817 aa8.04□□□□□ -1.12
UPS3YDR185C BUB1P41695 1021 aaKnown RBP RIP-Chip data8.04□□□□□ -1.12not detected
UPS3YDR185C NOP7P53261 605 aaKnown RBP8.04□□□□□ -1.12
UPS3YDR185C SLD2P34252 453 aa8.03□□□□□ -1.12
UPS3YDR185C PUS6P53294 404 aa8.03□□□□□ -1.12
UPS3YDR185C TIF1P10081 395 aaKnown RBP8.02□□□□□ -1.13
UPS3YDR185C ARG8P18544 423 aa8.02□□□□□ -1.13
UPS3YDR185C PAC1P39946 494 aaKnown RBP8.02□□□□□ -1.13
UPS3YDR185C RPL34AP87262 121 aaPredicted RBP8.02□□□□□ -1.13
UPS3YDR185C ERG12P07277 443 aa8.01□□□□□ -1.13
UPS3YDR185C CPS1P27614 576 aa8.01□□□□□ -1.13
UPS3YDR185C BCK2P33306 851 aa8.01□□□□□ -1.13
UPS3YDR185C YBL036CP38197 257 aa8.01□□□□□ -1.13
UPS3YDR185C RRN7P40992 514 aa8□□□□□ -1.13
UPS3YDR185C MRX12P47084 519 aa7.99□□□□□ -1.13
UPS3YDR185C SAS4Q04003 481 aa7.99□□□□□ -1.13
UPS3YDR185C GYP1Q08484 637 aa7.99□□□□□ -1.13
UPS3YDR185C YPR204WQ08995 1032 aa7.99□□□□□ -1.13
UPS3YDR185C NAP1P25293 417 aaKnown RBP7.98□□□□□ -1.13
UPS3YDR185C BIO2P32451 375 aa7.98□□□□□ -1.13
UPS3YDR185C TBF1Q02457 562 aa7.98□□□□□ -1.13
UPS3YDR185C YDL206WQ12424 762 aa7.98□□□□□ -1.13
UPS3YDR185C SDH2P21801 266 aa7.97□□□□□ -1.13
UPS3YDR185C MAK16P10962 306 aaPredicted RBP7.96□□□□□ -1.14
UPS3YDR185C CDC3P32457 520 aaKnown RBP7.96□□□□□ -1.14
UPS3YDR185C CSE4P36012 229 aa7.96□□□□□ -1.14
UPS3YDR185C TTI1P36097 1038 aa7.96□□□□□ -1.14
UPS3YDR185C SNU71P53207 620 aaKnown RBP7.96□□□□□ -1.14
UPS3YDR185C RTG2P32608 588 aaKnown RBP7.95□□□□□ -1.14
UPS3YDR185C RPA14P50106 137 aa7.95□□□□□ -1.14
UPS3YDR185C PDC1P06169 563 aaKnown RBP7.94□□□□□ -1.14
UPS3YDR185C SPT16P32558 1035 aaKnown RBP7.94□□□□□ -1.14
UPS3YDR185C PAT1P25644 796 aaKnown RBP7.93□□□□□ -1.14
UPS3YDR185C YPR097WQ06839 1073 aa7.93□□□□□ -1.14
UPS3YDR185C MOD5P07884 428 aa7.92□□□□□ -1.14
UPS3YDR185C XDJ1P39102 459 aa7.92□□□□□ -1.14
UPS3YDR185C NOB1Q08444 459 aaKnown RBP7.92□□□□□ -1.14
UPS3YDR185C SSF1P38789 453 aaPredicted RBP7.91□□□□□ -1.14
UPS3YDR185C SPT5P27692 1063 aaKnown RBP7.89□□□□□ -1.15
Retrieved 100 of 5,963 RNA–protein pairs in 17.5 ms