RNA–Protein interactions for RNA: YDL231C

BRE4, Transcript of Zinc finger protein containing five transmembrane domains, yeastyeast

Gene BRE4, Length 3,378 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BRE4YDL231C RTC1Q08281 1341 aa5.38□□□□□ -1.55
BRE4YDL231C KAR2P16474 682 aaKnown RBP5.38□□□□□ -1.55
BRE4YDL231C PRI1P10363 409 aa5.37□□□□□ -1.55
BRE4YDL231C CSE4P36012 229 aa5.37□□□□□ -1.55
BRE4YDL231C YBR287WP38355 427 aa5.37□□□□□ -1.55
BRE4YDL231C MAK10Q02197 733 aa5.36□□□□□ -1.55
BRE4YDL231C MHP1P43638 1398 aa5.36□□□□□ -1.55
BRE4YDL231C RPL17AP05740 184 aaKnown RBP5.36□□□□□ -1.55
BRE4YDL231C RPL17BP46990 184 aaKnown RBP5.36□□□□□ -1.55
BRE4YDL231C BUB1P41695 1021 aaKnown RBP RIP-Chip data5.35□□□□□ -1.55not detected
BRE4YDL231C YDL144CQ07589 356 aa5.35□□□□□ -1.55
BRE4YDL231C RAV1P47104 1357 aa5.35□□□□□ -1.55
BRE4YDL231C IML1P47170 1584 aa5.35□□□□□ -1.55
BRE4YDL231C MPP10P47083 593 aaKnown RBP5.35□□□□□ -1.55
BRE4YDL231C RPS24AP0CX31 135 aaKnown RBP5.35□□□□□ -1.55
BRE4YDL231C RPS24BP0CX32 135 aaKnown RBP5.35□□□□□ -1.55
BRE4YDL231C PPH3P32345 308 aa5.34□□□□□ -1.55
BRE4YDL231C TRK1P12685 1235 aa5.34□□□□□ -1.55
BRE4YDL231C RTR1P40084 226 aaPredicted RBP5.34□□□□□ -1.55
BRE4YDL231C DPS1P04802 557 aaKnown RBP5.33□□□□□ -1.56
BRE4YDL231C FPR3P38911 411 aaKnown RBP5.33□□□□□ -1.56
BRE4YDL231C IOC4Q04213 475 aa5.33□□□□□ -1.56
BRE4YDL231C SCT1P32784 759 aa5.32□□□□□ -1.56
BRE4YDL231C THI12P42883 340 aa5.32□□□□□ -1.56
BRE4YDL231C THI5P43534 340 aa5.32□□□□□ -1.56
BRE4YDL231C THI11P47183 340 aa5.32□□□□□ -1.56
BRE4YDL231C THI13Q07748 340 aa5.32□□□□□ -1.56
BRE4YDL231C CFT1Q06632 1357 aaKnown RBP5.31□□□□□ -1.56
BRE4YDL231C NUP192P47054 1683 aa5.31□□□□□ -1.56
BRE4YDL231C TY1B-NL2Q99337 1749 aaKnown RBP5.31□□□□□ -1.56
BRE4YDL231C HIM1Q06674 414 aa5.31□□□□□ -1.56
BRE4YDL231C LEU2P04173 364 aaPredicted RBP5.3□□□□□ -1.56
BRE4YDL231C PRP45P28004 379 aaPredicted RBP5.3□□□□□ -1.56
BRE4YDL231C RTF1P53064 558 aa5.3□□□□□ -1.56
BRE4YDL231C YNR029CP53729 429 aaKnown RBP5.3□□□□□ -1.56
BRE4YDL231C YLR419WQ06698 1435 aaKnown RBP5.3□□□□□ -1.56
BRE4YDL231C DAL5P15365 543 aa5.3□□□□□ -1.56
BRE4YDL231C TPD3P31383 635 aa5.29□□□□□ -1.56
BRE4YDL231C PRS1P32895 427 aaKnown RBP5.29□□□□□ -1.56
BRE4YDL231C PDI1P17967 522 aaKnown RBP5.29□□□□□ -1.56
BRE4YDL231C REB1P21538 810 aa5.28□□□□□ -1.56
BRE4YDL231C AAD16Q02895 342 aa5.28□□□□□ -1.56
BRE4YDL231C USO1P25386 1790 aa5.27□□□□□ -1.57
BRE4YDL231C FKH1P40466 484 aa5.27□□□□□ -1.57
BRE4YDL231C RVB2Q12464 471 aaKnown RBP5.27□□□□□ -1.57
BRE4YDL231C MLP1Q02455 1875 aaKnown RBP5.25□□□□□ -1.57
BRE4YDL231C CPS1P27614 576 aa5.25□□□□□ -1.57
BRE4YDL231C HSP104P31539 908 aaKnown RBP5.25□□□□□ -1.57
BRE4YDL231C YEF3P16521 1044 aaKnown RBP5.24□□□□□ -1.57
BRE4YDL231C VPS27P40343 622 aaKnown RBP5.24□□□□□ -1.57
BRE4YDL231C MTR4P47047 1073 aaKnown RBP5.23□□□□□ -1.57
BRE4YDL231C RRT14P40470 206 aa5.22□□□□□ -1.57
BRE4YDL231C CDC45Q08032 650 aa5.22□□□□□ -1.57
BRE4YDL231C RAD2P07276 1031 aa5.22□□□□□ -1.57
BRE4YDL231C SUI2P20459 304 aaKnown RBP5.22□□□□□ -1.57
BRE4YDL231C YFR016CP43597 1233 aaKnown RBP5.22□□□□□ -1.57
BRE4YDL231C APP1P53933 587 aa5.22□□□□□ -1.57
BRE4YDL231C YFR006WP43590 535 aa5.22□□□□□ -1.57
BRE4YDL231C PUF6Q04373 656 aaKnown RBP5.22□□□□□ -1.57
BRE4YDL231C SAP155P43612 1002 aa5.21□□□□□ -1.57
BRE4YDL231C PRP5P21372 849 aaPredicted RBP5.21□□□□□ -1.58
BRE4YDL231C RPC31P17890 251 aa5.21□□□□□ -1.58
BRE4YDL231C NOP8Q08287 484 aaPredicted RBP5.21□□□□□ -1.58
BRE4YDL231C MSB3P48566 633 aaPredicted RBP5.2□□□□□ -1.58
BRE4YDL231C YRB30P53107 440 aaPredicted RBP5.2□□□□□ -1.58
BRE4YDL231C YMR196WQ04336 1088 aa5.2□□□□□ -1.58
BRE4YDL231C RTT109Q07794 436 aa5.2□□□□□ -1.58
BRE4YDL231C TY3B-IQ7LHG5 1498 aaKnown RBP5.2□□□□□ -1.58
BRE4YDL231C AKL1P38080 1108 aaKnown RBP5.19□□□□□ -1.58
BRE4YDL231C RRP46P53256 223 aaPredicted RBP5.19□□□□□ -1.58
BRE4YDL231C VPS64Q03944 604 aa5.19□□□□□ -1.58
BRE4YDL231C PRD1P25375 712 aa5.19□□□□□ -1.58
BRE4YDL231C YGL081WP53156 320 aa5.18□□□□□ -1.58
BRE4YDL231C GRX4P32642 244 aa5.18□□□□□ -1.58
BRE4YDL231C THI22Q06490 572 aa5.18□□□□□ -1.58
BRE4YDL231C YML133CQ03099 1374 aa5.17□□□□□ -1.58
BRE4YDL231C YLL067CQ07888 1374 aa5.17□□□□□ -1.58
BRE4YDL231C YLL066CQ99208 1374 aa5.17□□□□□ -1.58
BRE4YDL231C BCK1Q01389 1478 aa5.17□□□□□ -1.58
BRE4YDL231C XKS1P42826 600 aa5.17□□□□□ -1.58
BRE4YDL231C ENT1Q12518 454 aa5.17□□□□□ -1.58
BRE4YDL231C ZDS1P50111 915 aaKnown RBP5.17□□□□□ -1.58
BRE4YDL231C RMD1Q03441 430 aa5.17□□□□□ -1.58
BRE4YDL231C KRI1P42846 591 aaKnown RBP5.16□□□□□ -1.58
BRE4YDL231C YGR122WP53272 402 aa5.16□□□□□ -1.58
BRE4YDL231C SWC3P31376 625 aa5.16□□□□□ -1.58
BRE4YDL231C PKH1Q03407 766 aa5.16□□□□□ -1.58
BRE4YDL231C BMS1Q08965 1183 aaKnown RBP5.16□□□□□ -1.58
BRE4YDL231C TCB1Q12466 1186 aa5.15□□□□□ -1.58
BRE4YDL231C BDP1P46678 594 aa5.15□□□□□ -1.59
BRE4YDL231C TSR3Q12094 313 aaKnown RBP5.15□□□□□ -1.59
BRE4YDL231C MAK21Q12176 1025 aaKnown RBP5.15□□□□□ -1.59
BRE4YDL231C ALE1Q08548 619 aa5.15□□□□□ -1.59
BRE4YDL231C RFC1P38630 861 aaKnown RBP5.14□□□□□ -1.59
BRE4YDL231C ATG13Q06628 738 aa5.14□□□□□ -1.59
BRE4YDL231C ZDS2P54786 942 aa5.14□□□□□ -1.59
BRE4YDL231C NMD2P38798 1089 aaKnown RBP5.13□□□□□ -1.59
BRE4YDL231C YJL181WP46987 611 aa5.13□□□□□ -1.59
BRE4YDL231C DSD1P53095 428 aa5.13□□□□□ -1.59
BRE4YDL231C SPO1P53541 631 aa5.13□□□□□ -1.59
Retrieved 100 of 5,963 RNA–protein pairs in 14.2 ms