RNA–Protein interactions for RNA: YBR260C

RGD1, Transcript of GTPase-activating protein (RhoGAP) for Rho3p and Rho4p, yeastyeast

Gene RGD1, Length 2,001 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RGD1YBR260C TY2B-LR1P0C2J3 1770 aa7.24□□□□□ -1.25
RGD1YBR260C TY2B-FP0CX63 1770 aa7.24□□□□□ -1.25
RGD1YBR260C TY2B-GR2P0CX64 1770 aa7.24□□□□□ -1.25
RGD1YBR260C TY2B-CP25384 1770 aa7.24□□□□□ -1.25
RGD1YBR260C TY2B-DR2Q03494 1770 aa7.24□□□□□ -1.25
RGD1YBR260C TY1B-DR1Q03855 1755 aa7.24□□□□□ -1.25
RGD1YBR260C TY2B-DR3Q07791 1770 aaKnown RBP7.24□□□□□ -1.25
RGD1YBR260C TY2B-OR1Q12113 1770 aa7.24□□□□□ -1.25
RGD1YBR260C TY2B-DR1Q12472 1770 aa7.24□□□□□ -1.25
RGD1YBR260C TY2B-OR2Q12501 1770 aa7.24□□□□□ -1.25
RGD1YBR260C RKM3P38222 552 aa7.24□□□□□ -1.25
RGD1YBR260C MPP10P47083 593 aaKnown RBP7.24□□□□□ -1.25
RGD1YBR260C DNF2Q12675 1612 aa7.24□□□□□ -1.25
RGD1YBR260C NAB6Q03735 1134 aaKnown RBP RIP-Chip data7.23□□□□□ -1.25not detected
RGD1YBR260C IQG1Q12280 1495 aa7.22□□□□□ -1.25
RGD1YBR260C DAL5P15365 543 aa7.22□□□□□ -1.25
RGD1YBR260C RIM101P33400 625 aa7.22□□□□□ -1.25
RGD1YBR260C TCD1P38756 429 aa7.22□□□□□ -1.25
RGD1YBR260C YGL081WP53156 320 aa7.22□□□□□ -1.25
RGD1YBR260C RPN7Q06103 429 aaKnown RBP7.22□□□□□ -1.25
RGD1YBR260C PAP2P53632 584 aaKnown RBP7.22□□□□□ -1.25
RGD1YBR260C HAP5Q02516 242 aa7.22□□□□□ -1.25
RGD1YBR260C ECM16Q04217 1267 aaKnown RBP7.22□□□□□ -1.25
RGD1YBR260C POL32P47110 350 aa7.21□□□□□ -1.26
RGD1YBR260C GRX3Q03835 250 aa7.21□□□□□ -1.26
RGD1YBR260C SFI1Q12369 946 aa7.21□□□□□ -1.26
RGD1YBR260C TY2B-BQ12491 1770 aa7.21□□□□□ -1.26
RGD1YBR260C SRS2P12954 1174 aa7.2□□□□□ -1.26
RGD1YBR260C BYE1P36106 594 aa7.2□□□□□ -1.26
RGD1YBR260C TAF5P38129 798 aa7.2□□□□□ -1.26
RGD1YBR260C COG8Q04632 607 aa7.2□□□□□ -1.26
RGD1YBR260C ARO1P08566 1588 aaKnown RBP7.2□□□□□ -1.26
RGD1YBR260C TRK1P12685 1235 aa7.2□□□□□ -1.26
RGD1YBR260C PIL1P53252 339 aaKnown RBP7.2□□□□□ -1.26
RGD1YBR260C IOC4Q04213 475 aa7.19□□□□□ -1.26
RGD1YBR260C HSP82P02829 709 aaKnown RBP7.18□□□□□ -1.26
RGD1YBR260C MIC60P36112 540 aa7.18□□□□□ -1.26
RGD1YBR260C YGL140CP53120 1219 aa7.18□□□□□ -1.26
RGD1YBR260C RNT1Q02555 471 aa7.18□□□□□ -1.26
RGD1YBR260C ROM2P51862 1356 aaKnown RBP7.18□□□□□ -1.26
RGD1YBR260C NNF2P53253 936 aa7.18□□□□□ -1.26
RGD1YBR260C PSE1P32337 1089 aaKnown RBP7.17□□□□□ -1.26
RGD1YBR260C SAP190P36123 1033 aa7.17□□□□□ -1.26
RGD1YBR260C YIL092WP40497 633 aa7.17□□□□□ -1.26
RGD1YBR260C YMR102CQ03177 834 aa7.17□□□□□ -1.26
RGD1YBR260C MFT1P33441 392 aaKnown RBP7.17□□□□□ -1.26
RGD1YBR260C RTG3P38165 486 aa7.17□□□□□ -1.26
RGD1YBR260C CKB1P43639 278 aa7.17□□□□□ -1.26
RGD1YBR260C UBP10P53874 792 aaPredicted RBP7.17□□□□□ -1.26
RGD1YBR260C GDT1P38301 280 aaPredicted RBP7.16□□□□□ -1.26
RGD1YBR260C RVS167P39743 482 aaKnown RBP7.16□□□□□ -1.26
RGD1YBR260C CIR1P42940 261 aa7.16□□□□□ -1.26
RGD1YBR260C YOL087CQ99247 1116 aa7.16□□□□□ -1.26
RGD1YBR260C CYC8P14922 966 aa7.15□□□□□ -1.26
RGD1YBR260C RPN12P32496 274 aa7.15□□□□□ -1.26
RGD1YBR260C CHZ1P40019 153 aaPredicted RBP7.15□□□□□ -1.26
RGD1YBR260C SAP155P43612 1002 aa7.15□□□□□ -1.26
RGD1YBR260C PUF6Q04373 656 aaKnown RBP7.15□□□□□ -1.26
RGD1YBR260C MET5P47169 1442 aa7.15□□□□□ -1.27
RGD1YBR260C MNR2P35724 969 aa7.15□□□□□ -1.27
RGD1YBR260C RRT14P40470 206 aa7.15□□□□□ -1.27
RGD1YBR260C STU2P46675 888 aa7.15□□□□□ -1.27
RGD1YBR260C NPA3P47122 385 aa7.15□□□□□ -1.27
RGD1YBR260C SML1Q04964 104 aa7.15□□□□□ -1.27
RGD1YBR260C RAD9P14737 1309 aa7.14□□□□□ -1.27
RGD1YBR260C PLP2Q12017 286 aa7.14□□□□□ -1.27
RGD1YBR260C SNT2P53127 1403 aa7.14□□□□□ -1.27
RGD1YBR260C YEF3P16521 1044 aaKnown RBP7.13□□□□□ -1.27
RGD1YBR260C SRP54P20424 541 aaKnown RBP7.13□□□□□ -1.27
RGD1YBR260C SWH1P35845 1188 aa7.13□□□□□ -1.27
RGD1YBR260C MRS2Q01926 470 aa7.13□□□□□ -1.27
RGD1YBR260C TIM50Q02776 476 aa7.13□□□□□ -1.27
RGD1YBR260C BUD21Q08492 214 aaPredicted RBP7.13□□□□□ -1.27
RGD1YBR260C CEP3P40969 608 aa7.13□□□□□ -1.27
RGD1YBR260C HAP1P0CE41 1502 aa7.12□□□□□ -1.27
RGD1YBR260C VTH1P40438 1549 aa7.12□□□□□ -1.27
RGD1YBR260C VTH2P40890 1549 aa7.12□□□□□ -1.27
RGD1YBR260C SNF2P22082 1703 aa7.12□□□□□ -1.27
RGD1YBR260C CAT8P39113 1433 aa7.12□□□□□ -1.27
RGD1YBR260C SSL2Q00578 843 aa7.11□□□□□ -1.27
RGD1YBR260C RLP24Q07915 199 aaKnown RBP7.11□□□□□ -1.27
RGD1YBR260C NOP8Q08287 484 aaPredicted RBP7.11□□□□□ -1.27
RGD1YBR260C NUP145P49687 1317 aa7.11□□□□□ -1.27
RGD1YBR260C RTT107P38850 1070 aa7.11□□□□□ -1.27
RGD1YBR260C VPS41P38959 992 aa7.11□□□□□ -1.27
RGD1YBR260C TAN1P53072 289 aaPredicted RBP7.11□□□□□ -1.27
RGD1YBR260C ARP5P53946 755 aa7.11□□□□□ -1.27
RGD1YBR260C TLG2Q08144 397 aa7.11□□□□□ -1.27
RGD1YBR260C PDR12Q02785 1511 aa7.11□□□□□ -1.27
RGD1YBR260C PSK1P31374 1356 aa7.11□□□□□ -1.27
RGD1YBR260C MDS3P53094 1487 aa7.1□□□□□ -1.27
RGD1YBR260C TPD3P31383 635 aa7.1□□□□□ -1.27
RGD1YBR260C DID4P36108 232 aa7.1□□□□□ -1.27
RGD1YBR260C BDH2P39713 417 aa7.1□□□□□ -1.27
RGD1YBR260C YGL082WP53155 381 aa7.1□□□□□ -1.27
RGD1YBR260C KRE33P53914 1056 aaKnown RBP7.1□□□□□ -1.27
RGD1YBR260C YNL035CP53962 389 aaKnown RBP7.1□□□□□ -1.27
RGD1YBR260C RAD51P25454 400 aa7.1□□□□□ -1.27
RGD1YBR260C PBY1P38254 753 aa7.1□□□□□ -1.27
RGD1YBR260C PRP31P49704 494 aaPredicted RBP7.1□□□□□ -1.27
Retrieved 100 of 5,963 RNA–protein pairs in 14.5 ms