RNA–Protein interactions for RNA: YBL004W

UTP20, Transcript of Component of the small-subunit (SSU) processome, yeastyeast

Gene UTP20, Length 7,482 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UTP20YBL004W ETP1P38748 585 aaKnown RBP1.64□□□□□ -2.15
UTP20YBL004W WHI3P34761 661 aaKnown RBP1.63□□□□□ -2.15
UTP20YBL004W FRK1Q03002 865 aaPredicted RBP1.63□□□□□ -2.15
UTP20YBL004W IMH1Q06704 911 aaKnown RBP1.63□□□□□ -2.15
UTP20YBL004W SSA2P10592 639 aaKnown RBP1.62□□□□□ -2.15
UTP20YBL004W YBL086CP38177 466 aa1.62□□□□□ -2.15
UTP20YBL004W BFR2Q06631 534 aaKnown RBP1.61□□□□□ -2.15
UTP20YBL004W MHP1P43638 1398 aa1.61□□□□□ -2.15
UTP20YBL004W BDF1P35817 686 aa1.6□□□□□ -2.15
UTP20YBL004W NCS6P53088 359 aa1.6□□□□□ -2.15
UTP20YBL004W RAD9P14737 1309 aa1.6□□□□□ -2.15
UTP20YBL004W SSA4P22202 642 aaKnown RBP1.6□□□□□ -2.15
UTP20YBL004W CTH1P47976 325 aa1.6□□□□□ -2.15
UTP20YBL004W FPK1P53739 893 aa1.59□□□□□ -2.15
UTP20YBL004W ECM16Q04217 1267 aaKnown RBP1.59□□□□□ -2.15
UTP20YBL004W YFL040WP43562 540 aa1.59□□□□□ -2.15
UTP20YBL004W GSC2P40989 1895 aa1.59□□□□□ -2.15
UTP20YBL004W NUP192P47054 1683 aa1.59□□□□□ -2.16
UTP20YBL004W DLD1P32891 587 aa1.58□□□□□ -2.16
UTP20YBL004W FMP30Q02883 468 aa1.58□□□□□ -2.16
UTP20YBL004W TIF6Q12522 245 aaKnown RBP1.58□□□□□ -2.16
UTP20YBL004W ALD3P54114 506 aa1.58□□□□□ -2.16
UTP20YBL004W SIR4P11978 1358 aa1.58□□□□□ -2.16
UTP20YBL004W RPS9AO13516 197 aaKnown RBP1.57□□□□□ -2.16
UTP20YBL004W CTT1P06115 562 aa1.57□□□□□ -2.16
UTP20YBL004W NSR1P27476 414 aaKnown RBP RIP-Chip data1.57□□□□□ -2.16not detected
UTP20YBL004W YIL177CP40434 1758 aa1.57□□□□□ -2.16
UTP20YBL004W YJL225CP40889 1758 aa1.57□□□□□ -2.16
UTP20YBL004W CLA4P48562 842 aa1.57□□□□□ -2.16
UTP20YBL004W FIG2P25653 1609 aa1.57□□□□□ -2.16
UTP20YBL004W YVH1Q02256 364 aaKnown RBP1.57□□□□□ -2.16
UTP20YBL004W IPL1P38991 367 aa1.56□□□□□ -2.16
UTP20YBL004W REB1P21538 810 aa1.56□□□□□ -2.16
UTP20YBL004W URB1P34241 1764 aaKnown RBP1.56□□□□□ -2.16
UTP20YBL004W TAF7Q05021 590 aa1.56□□□□□ -2.16
UTP20YBL004W UTP22P53254 1237 aaPredicted RBP1.56□□□□□ -2.16
UTP20YBL004W PSK1P31374 1356 aa1.56□□□□□ -2.16
UTP20YBL004W BSD2P38356 321 aa1.55□□□□□ -2.16
UTP20YBL004W IES2P40154 320 aa1.55□□□□□ -2.16
UTP20YBL004W SAP155P43612 1002 aa1.55□□□□□ -2.16
UTP20YBL004W ERT1P38140 529 aa1.54□□□□□ -2.16
UTP20YBL004W ZDS2P54786 942 aa1.54□□□□□ -2.16
UTP20YBL004W LYS2P07702 1392 aa1.54□□□□□ -2.16
UTP20YBL004W MAL31P38156 614 aa1.54□□□□□ -2.16
UTP20YBL004W AIM21P40563 679 aa1.54□□□□□ -2.16
UTP20YBL004W PRP40P33203 583 aaKnown RBP1.54□□□□□ -2.16
UTP20YBL004W RSC30P38781 883 aa1.53□□□□□ -2.16
UTP20YBL004W YKL222CP35995 705 aa1.53□□□□□ -2.16
UTP20YBL004W YRF1-3P0CX14 1859 aa1.53□□□□□ -2.16
UTP20YBL004W YRF1-7P0CX15 1859 aa1.53□□□□□ -2.16
UTP20YBL004W YRF1-6P53819 1859 aa1.53□□□□□ -2.16
UTP20YBL004W CST9Q06032 482 aa1.53□□□□□ -2.17
UTP20YBL004W ENT1Q12518 454 aa1.52□□□□□ -2.17
UTP20YBL004W ECM30Q06673 1274 aa1.52□□□□□ -2.17
UTP20YBL004W NYV1Q12255 253 aa1.51□□□□□ -2.17
UTP20YBL004W YLL067CQ07888 1374 aa1.51□□□□□ -2.17
UTP20YBL004W RIM15P43565 1770 aa1.51□□□□□ -2.17
UTP20YBL004W YLR278CQ05854 1341 aa1.51□□□□□ -2.17
UTP20YBL004W RTT106P40161 455 aa1.51□□□□□ -2.17
UTP20YBL004W YML133CQ03099 1374 aa1.51□□□□□ -2.17
UTP20YBL004W YRF1-4O13559 1382 aa1.51□□□□□ -2.17
UTP20YBL004W MSC7P38694 644 aa1.5□□□□□ -2.17
UTP20YBL004W HVG1P0CE11 249 aa1.5□□□□□ -2.17
UTP20YBL004W LEO1P38439 464 aa1.5□□□□□ -2.17
UTP20YBL004W YNR029CP53729 429 aaKnown RBP1.5□□□□□ -2.17
UTP20YBL004W TUS1Q06412 1307 aa1.5□□□□□ -2.17
UTP20YBL004W RTG2P32608 588 aaKnown RBP1.5□□□□□ -2.17
UTP20YBL004W NPR2P39923 615 aa1.5□□□□□ -2.17
UTP20YBL004W TFC8Q12308 588 aa1.5□□□□□ -2.17
UTP20YBL004W MOT2P34909 587 aaKnown RBP1.5□□□□□ -2.17
UTP20YBL004W APP1P53933 587 aa1.49□□□□□ -2.17
UTP20YBL004W APC1P53886 1748 aa1.49□□□□□ -2.17
UTP20YBL004W RAD4P14736 754 aa1.49□□□□□ -2.17
UTP20YBL004W FKS3Q04952 1785 aa1.49□□□□□ -2.17
UTP20YBL004W ADE6P38972 1358 aaKnown RBP1.49□□□□□ -2.17
UTP20YBL004W TOS1P38288 455 aa1.49□□□□□ -2.17
UTP20YBL004W PIB1Q06651 286 aa1.49□□□□□ -2.17
UTP20YBL004W CUP1-1P0CX80 61 aa1.49□□□□□ -2.17
UTP20YBL004W CUP1-2P0CX81 61 aa1.49□□□□□ -2.17
UTP20YBL004W YER156CP40093 338 aaKnown RBP1.49□□□□□ -2.17
UTP20YBL004W LAM6Q08001 693 aa1.49□□□□□ -2.17
UTP20YBL004W POL3P15436 1097 aa1.48□□□□□ -2.17
UTP20YBL004W SHC1P39000 512 aa1.48□□□□□ -2.17
UTP20YBL004W YJL181WP46987 611 aa1.48□□□□□ -2.17
UTP20YBL004W RRT6P53117 311 aaPredicted RBP1.48□□□□□ -2.17
UTP20YBL004W RQC2Q12532 1038 aaKnown RBP1.47□□□□□ -2.17
UTP20YBL004W YMR084WA2P2R3 262 aa1.47□□□□□ -2.17
UTP20YBL004W DRE2P36152 348 aa1.47□□□□□ -2.17
UTP20YBL004W PSD2P53037 1138 aaKnown RBP1.47□□□□□ -2.17
UTP20YBL004W RRT14P40470 206 aa1.47□□□□□ -2.17
UTP20YBL004W YIL089WP40500 205 aa1.46□□□□□ -2.18
UTP20YBL004W PRP43P53131 767 aaKnown RBP1.46□□□□□ -2.18
UTP20YBL004W ART5P53244 586 aaKnown RBP1.46□□□□□ -2.18
UTP20YBL004W EAF1Q06337 982 aa1.46□□□□□ -2.18
UTP20YBL004W PTC4P38089 393 aa1.46□□□□□ -2.18
UTP20YBL004W RAT1Q02792 1006 aaKnown RBP1.45□□□□□ -2.18
UTP20YBL004W RPG1P38249 964 aaKnown RBP1.45□□□□□ -2.18
UTP20YBL004W DIB1Q06819 143 aaPredicted RBP1.45□□□□□ -2.18
UTP20YBL004W AUS1Q08409 1394 aa1.45□□□□□ -2.18
UTP20YBL004W PFF1P38244 976 aa1.45□□□□□ -2.18
Retrieved 100 of 5,963 RNA–protein pairs in 14.6 ms