RNA–Protein interactions for RNA: YAL030W

SNC1, Transcript of Vesicle membrane receptor protein (v-SNARE), yeastyeast

Gene SNC1, Length 354 nt, Biotype protein coding, Subcellular localisation Cellular bud, Cytosol, Endoplasmic reticulum, Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNC1YAL030W YDR344CQ05510 147 aa3.37□□□□□ -1.87
SNC1YAL030W TIF1P10081 395 aaKnown RBP3.36□□□□□ -1.87
SNC1YAL030W SIT4P20604 311 aa3.36□□□□□ -1.87
SNC1YAL030W BIO2P32451 375 aa3.36□□□□□ -1.87
SNC1YAL030W BCK2P33306 851 aa3.36□□□□□ -1.87
SNC1YAL030W SIS2P36024 562 aa3.36□□□□□ -1.87
SNC1YAL030W VRP1P37370 817 aa3.36□□□□□ -1.87
SNC1YAL030W ARH1P48360 493 aa3.36□□□□□ -1.87
SNC1YAL030W NMA111P53920 997 aa3.36□□□□□ -1.87
SNC1YAL030W RAD59Q12223 238 aa3.36□□□□□ -1.87
SNC1YAL030W SPT23P35210 1082 aa3.35□□□□□ -1.87
SNC1YAL030W HAP5Q02516 242 aa3.35□□□□□ -1.87
SNC1YAL030W PKH3Q03306 898 aaPredicted RBP3.35□□□□□ -1.87
SNC1YAL030W YPR109WQ06104 294 aa3.35□□□□□ -1.87
SNC1YAL030W MPC54Q08550 464 aa3.35□□□□□ -1.87
SNC1YAL030W TYW1Q08960 810 aaKnown RBP3.35□□□□□ -1.87
SNC1YAL030W MMP1Q12372 583 aa3.35□□□□□ -1.87
SNC1YAL030W TTI1P36097 1038 aa3.34□□□□□ -1.87
SNC1YAL030W SLX8P40072 274 aa3.34□□□□□ -1.87
SNC1YAL030W RTF1P53064 558 aa3.34□□□□□ -1.87
SNC1YAL030W DPL1Q05567 589 aa3.34□□□□□ -1.87
SNC1YAL030W ERG12P07277 443 aa3.33□□□□□ -1.88
SNC1YAL030W MAK16P10962 306 aaPredicted RBP3.33□□□□□ -1.88
SNC1YAL030W SUP45P12385 437 aaKnown RBP3.33□□□□□ -1.88
SNC1YAL030W ESS1P22696 170 aa3.33□□□□□ -1.88
SNC1YAL030W PEX21P50091 288 aa3.33□□□□□ -1.88
SNC1YAL030W CDC73Q06697 393 aa3.33□□□□□ -1.88
SNC1YAL030W LAM6Q08001 693 aa3.33□□□□□ -1.88
SNC1YAL030W RTG2P32608 588 aaKnown RBP3.32□□□□□ -1.88
SNC1YAL030W PTC2P39966 464 aaKnown RBP3.32□□□□□ -1.88
SNC1YAL030W YPR204WQ08995 1032 aa3.32□□□□□ -1.88
SNC1YAL030W CPS1P27614 576 aa3.31□□□□□ -1.88
SNC1YAL030W RSC30P38781 883 aa3.31□□□□□ -1.88
SNC1YAL030W YPP1P46951 817 aa3.31□□□□□ -1.88
SNC1YAL030W RIM21P48565 533 aa3.31□□□□□ -1.88
SNC1YAL030W NAF1P53919 492 aaKnown RBP3.31□□□□□ -1.88
SNC1YAL030W ISU2Q12056 156 aa3.31□□□□□ -1.88
SNC1YAL030W ARG8P18544 423 aa3.3□□□□□ -1.88
SNC1YAL030W SCJ1P25303 377 aa3.3□□□□□ -1.88
SNC1YAL030W YJU3P28321 313 aa3.3□□□□□ -1.88
SNC1YAL030W CDC3P32457 520 aaKnown RBP3.3□□□□□ -1.88
SNC1YAL030W BUB1P41695 1021 aaKnown RBP RIP-Chip data3.3□□□□□ -1.88not detected
SNC1YAL030W BNI4P53858 892 aa3.3□□□□□ -1.88
SNC1YAL030W YNL115CP53925 644 aa3.3□□□□□ -1.88
SNC1YAL030W YNL108CP53929 270 aa3.3□□□□□ -1.88
SNC1YAL030W RPL34AP87262 121 aaPredicted RBP3.3□□□□□ -1.88
SNC1YAL030W MRX10Q05648 414 aa3.3□□□□□ -1.88
SNC1YAL030W ENO2P00925 437 aaKnown RBP3.29□□□□□ -1.88
SNC1YAL030W SLY41P22215 453 aa3.29□□□□□ -1.88
SNC1YAL030W SLD2P34252 453 aa3.29□□□□□ -1.88
SNC1YAL030W XDJ1P39102 459 aa3.29□□□□□ -1.88
SNC1YAL030W NOB1Q08444 459 aaKnown RBP3.29□□□□□ -1.88
SNC1YAL030W TUM1Q08686 304 aaKnown RBP3.29□□□□□ -1.88
SNC1YAL030W ENO1P00924 437 aaKnown RBP3.28□□□□□ -1.88
SNC1YAL030W PUP1P25043 261 aa3.28□□□□□ -1.88
SNC1YAL030W SSF1P38789 453 aaPredicted RBP3.28□□□□□ -1.88
SNC1YAL030W TRM1P15565 570 aaKnown RBP3.27□□□□□ -1.89
SNC1YAL030W TGL4P36165 910 aa3.27□□□□□ -1.89
SNC1YAL030W MRX12P47084 519 aa3.27□□□□□ -1.89
SNC1YAL030W PUS6P53294 404 aa3.27□□□□□ -1.89
SNC1YAL030W YML082WQ04533 649 aaKnown RBP3.27□□□□□ -1.89
SNC1YAL030W YRR1Q12172 810 aa3.27□□□□□ -1.89
SNC1YAL030W PDR1P12383 1068 aa3.26□□□□□ -1.89
SNC1YAL030W YDJ1P25491 409 aaKnown RBP3.26□□□□□ -1.89
SNC1YAL030W NUD1P32336 851 aa3.26□□□□□ -1.89
SNC1YAL030W PEP12P32854 288 aa3.26□□□□□ -1.89
SNC1YAL030W TBF1Q02457 562 aa3.26□□□□□ -1.89
SNC1YAL030W GYP1Q08484 637 aa3.26□□□□□ -1.89
SNC1YAL030W MCM16Q12262 181 aa3.26□□□□□ -1.89
SNC1YAL030W DPS1P04802 557 aaKnown RBP3.24□□□□□ -1.89
SNC1YAL030W KEX2P13134 814 aa3.24□□□□□ -1.89
SNC1YAL030W NPL4P33755 580 aa3.24□□□□□ -1.89
SNC1YAL030W RPA14P50106 137 aa3.24□□□□□ -1.89
SNC1YAL030W YML083CQ04526 418 aa3.24□□□□□ -1.89
SNC1YAL030W RDS2P19541 446 aaKnown RBP3.23□□□□□ -1.89
SNC1YAL030W RGA1P39083 1007 aa3.23□□□□□ -1.89
SNC1YAL030W ATG3P40344 310 aa3.23□□□□□ -1.89
SNC1YAL030W SEN54Q02825 467 aaPredicted RBP3.23□□□□□ -1.89
SNC1YAL030W AIM44Q99299 758 aa3.23□□□□□ -1.89
SNC1YAL030W GAL2P13181 574 aa3.22□□□□□ -1.89
SNC1YAL030W TEC1P18412 486 aa3.22□□□□□ -1.89
SNC1YAL030W RAM1P22007 431 aa3.22□□□□□ -1.89
SNC1YAL030W HEM3P28789 327 aa3.22□□□□□ -1.89
SNC1YAL030W ASF1P32447 279 aa3.22□□□□□ -1.89
SNC1YAL030W STR2P47164 639 aa3.22□□□□□ -1.89
SNC1YAL030W AGE1Q04412 482 aa3.22□□□□□ -1.89
SNC1YAL030W UTP13Q05946 817 aaKnown RBP3.22□□□□□ -1.89
SNC1YAL030W FRA1Q07825 749 aa3.22□□□□□ -1.89
SNC1YAL030W YDL206WQ12424 762 aa3.22□□□□□ -1.89
SNC1YAL030W YPR015CQ12531 247 aa3.22□□□□□ -1.89
SNC1YAL030W SEC20P28791 383 aa3.21□□□□□ -1.9
SNC1YAL030W GUT2P32191 649 aa3.21□□□□□ -1.9
SNC1YAL030W GCD11P32481 527 aaKnown RBP3.21□□□□□ -1.9
SNC1YAL030W STM1P39015 273 aaKnown RBP3.21□□□□□ -1.9
SNC1YAL030W APL6P46682 809 aa3.21□□□□□ -1.9
SNC1YAL030W SNU71P53207 620 aaKnown RBP3.21□□□□□ -1.9
SNC1YAL030W NOP7P53261 605 aaKnown RBP3.21□□□□□ -1.9
SNC1YAL030W ORC1P54784 914 aaPredicted RBP3.21□□□□□ -1.9
SNC1YAL030W ERF2Q06551 359 aa3.21□□□□□ -1.9
SNC1YAL030W YPR097WQ06839 1073 aa3.21□□□□□ -1.9
Retrieved 100 of 5,963 RNA–protein pairs in 13.7 ms