RNA–Protein interactions for RNA: ENST00000640853.1

LPP-222, Transcript of LIM domain containing preferred translocation partner in lipoma, human

APPRIS P1 TSL 1 (best) BASIC

Gene LPP, Length 18,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LPP-222	ENST00000640853	ARID4B	Q4LE39	1312 aa	Predicted RBP	3.91	□□□□□ -1.78
LPP-222	ENST00000640853	ERCC6	Q03468	1493 aa		3.91	□□□□□ -1.78
LPP-222	ENST00000640853	RAB3GAP2	Q9H2M9	1393 aa		3.91	□□□□□ -1.78
LPP-222	ENST00000640853	PDE3B	Q13370	1112 aa		3.91	□□□□□ -1.78
LPP-222	ENST00000640853	CCDC88B	A6NC98	1476 aa		3.91	□□□□□ -1.78
LPP-222	ENST00000640853	PTMS	P20962	102 aa		3.91	□□□□□ -1.78
LPP-222	ENST00000640853	CYB5RL	Q6IPT4	315 aa		3.91	□□□□□ -1.78
LPP-222	ENST00000640853	MROH2B	Q7Z745	1585 aa		3.91	□□□□□ -1.78
LPP-222	ENST00000640853	TAF7L	Q5H9L4	462 aa		3.91	□□□□□ -1.78
LPP-222	ENST00000640853	NACAD	O15069	1562 aa		3.91	□□□□□ -1.78
LPP-222	ENST00000640853	CARMIL1	Q5VZK9	1371 aa		3.91	□□□□□ -1.78
LPP-222	ENST00000640853	ARID3A	Q99856	593 aa		3.91	□□□□□ -1.78
LPP-222	ENST00000640853	GOLGA3	Q08378	1498 aa		3.91	□□□□□ -1.78
LPP-222	ENST00000640853	DHX57	Q6P158	1386 aa	Known RBP	3.9	□□□□□ -1.78
LPP-222	ENST00000640853	TMF1	P82094	1093 aa		3.9	□□□□□ -1.78
LPP-222	ENST00000640853	MPHOSPH9	Q99550	1183 aa		3.9	□□□□□ -1.78
LPP-222	ENST00000640853	JPH4	Q96JJ6	628 aa		3.9	□□□□□ -1.79
LPP-222	ENST00000640853	RWDD1	Q9H446	243 aa	Predicted RBP	3.9	□□□□□ -1.79
LPP-222	ENST00000640853	NAP1L5	Q96NT1	182 aa	Predicted RBP	3.9	□□□□□ -1.79
LPP-222	ENST00000640853	FBXO3	Q9UK99	471 aa		3.9	□□□□□ -1.79
LPP-222	ENST00000640853	VPS8	Q8N3P4	1428 aa		3.89	□□□□□ -1.79
LPP-222	ENST00000640853	CC2D1B	Q5T0F9	858 aa	Known RBP	3.89	□□□□□ -1.79
LPP-222	ENST00000640853	GGT6	Q6P531	493 aa		3.89	□□□□□ -1.79
LPP-222	ENST00000640853	ZBTB7C	A1YPR0	619 aa		3.89	□□□□□ -1.79
LPP-222	ENST00000640853	FGD1	P98174	961 aa		3.89	□□□□□ -1.79
LPP-222	ENST00000640853	HSP90AB1	P08238	724 aa	Known RBP	3.89	□□□□□ -1.79
LPP-222	ENST00000640853	PKNOX2	Q96KN3	472 aa		3.89	□□□□□ -1.79
LPP-222	ENST00000640853	HSCB	Q8IWL3	235 aa		3.89	□□□□□ -1.79
LPP-222	ENST00000640853	CUX2	O14529	1486 aa		3.89	□□□□□ -1.79
LPP-222	ENST00000640853	HNRNPM	P52272	730 aa	Known RBP eCLIP	3.89	□□□□□ -1.79	1e-6	■■■■□ 19.6
LPP-222	ENST00000640853	FOXD1	Q16676	465 aa		3.89	□□□□□ -1.79
LPP-222	ENST00000640853	PDE4A	P27815	886 aa		3.89	□□□□□ -1.79
LPP-222	ENST00000640853	MSH5	O43196	834 aa		3.88	□□□□□ -1.79
LPP-222	ENST00000640853	KIF27	Q86VH2	1401 aa		3.88	□□□□□ -1.79
LPP-222	ENST00000640853	ZRSR1	Q15695	479 aa	Known RBP	3.88	□□□□□ -1.79
LPP-222	ENST00000640853	HDGF	P51858	240 aa	Known RBP	3.88	□□□□□ -1.79
LPP-222	ENST00000640853	PDCL3	Q9H2J4	239 aa		3.88	□□□□□ -1.79
LPP-222	ENST00000640853	CADPS	Q9ULU8	1353 aa		3.88	□□□□□ -1.79
LPP-222	ENST00000640853	HSP90B1	P14625	803 aa	Known RBP	3.88	□□□□□ -1.79
LPP-222	ENST00000640853	RSPH6A	Q9H0K4	717 aa		3.88	□□□□□ -1.79
LPP-222	ENST00000640853	PPP6R1	Q9UPN7	881 aa		3.88	□□□□□ -1.79
LPP-222	ENST00000640853	GBP4	Q96PP9	640 aa		3.87	□□□□□ -1.79
LPP-222	ENST00000640853	MCC	P23508	829 aa		3.87	□□□□□ -1.79
LPP-222	ENST00000640853	DCAF11	Q8TEB1	546 aa		3.87	□□□□□ -1.79
LPP-222	ENST00000640853	ZBTB4	Q9P1Z0	1013 aa	Predicted RBP	3.87	□□□□□ -1.79
LPP-222	ENST00000640853	RGS3	P49796	1198 aa		3.87	□□□□□ -1.79
LPP-222	ENST00000640853	PAK3	O75914	559 aa	Predicted RBP	3.87	□□□□□ -1.79
LPP-222	ENST00000640853	DNTTIP2	Q5QJE6	756 aa	Known RBP	3.87	□□□□□ -1.79
LPP-222	ENST00000640853	FRAT1	Q92837	279 aa	Predicted RBP	3.87	□□□□□ -1.79
LPP-222	ENST00000640853	GOLGA6L6	A8MZA4	724 aa		3.87	□□□□□ -1.79
LPP-222	ENST00000640853	BRD2	P25440	801 aa	Known RBP	3.87	□□□□□ -1.79
LPP-222	ENST00000640853	RSPH4A	Q5TD94	716 aa		3.87	□□□□□ -1.79
LPP-222	ENST00000640853	CEP164	Q9UPV0	1460 aa		3.86	□□□□□ -1.79
LPP-222	ENST00000640853	CHAF1A	Q13111	956 aa	Predicted RBP	3.86	□□□□□ -1.79
LPP-222	ENST00000640853	PAXIP1	Q6ZW49	1069 aa	Predicted RBP	3.86	□□□□□ -1.79
LPP-222	ENST00000640853	PMFBP1	Q8TBY8	1022 aa		3.86	□□□□□ -1.79
LPP-222	ENST00000640853	NRDC	O43847	1150 aa		3.86	□□□□□ -1.79
LPP-222	ENST00000640853	MORC1	Q86VD1	984 aa		3.86	□□□□□ -1.79
LPP-222	ENST00000640853	ATAD2B	Q9ULI0	1458 aa		3.86	□□□□□ -1.79
LPP-222	ENST00000640853	GOLGA6L3	A6NEY3	463 aa		3.86	□□□□□ -1.79
LPP-222	ENST00000640853	KIAA1211	Q6ZU35	1233 aa		3.86	□□□□□ -1.79
LPP-222	ENST00000640853	CALD1	Q05682	793 aa	Known RBP	3.86	□□□□□ -1.79
LPP-222	ENST00000640853	CALR	P27797	417 aa	Known RBP	3.86	□□□□□ -1.79
LPP-222	ENST00000640853	PPP1R1B	Q9UD71	204 aa	Predicted RBP	3.86	□□□□□ -1.79
LPP-222	ENST00000640853	RUSC2	Q8N2Y8	1516 aa		3.86	□□□□□ -1.79
LPP-222	ENST00000640853	PDS5B	Q9NTI5	1447 aa		3.86	□□□□□ -1.79
LPP-222	ENST00000640853	ZBED9	Q6R2W3	1325 aa		3.85	□□□□□ -1.79
LPP-222	ENST00000640853	PRKRIP1	Q9H875	184 aa	Predicted RBP	3.85	□□□□□ -1.79
LPP-222	ENST00000640853	PKD2	Q13563	968 aa		3.85	□□□□□ -1.79
LPP-222	ENST00000640853	GOLGA2	Q08379	1002 aa		3.85	□□□□□ -1.79
LPP-222	ENST00000640853	GOLGA6L4	A6NEF3	574 aa		3.85	□□□□□ -1.79
LPP-222	ENST00000640853	NLRP13	Q86W25	1043 aa		3.85	□□□□□ -1.79
LPP-222	ENST00000640853	APP	P05067	770 aa		3.84	□□□□□ -1.79
LPP-222	ENST00000640853	BRPF3	Q9ULD4	1205 aa		3.84	□□□□□ -1.79
LPP-222	ENST00000640853		A0A0U1RQG5	324 aa	Predicted RBP	3.84	□□□□□ -1.79
LPP-222	ENST00000640853	SLC4A3	P48751	1232 aa		3.84	□□□□□ -1.79
LPP-222	ENST00000640853	NEUROD2	Q15784	382 aa		3.84	□□□□□ -1.79
LPP-222	ENST00000640853	NOP2	P46087	812 aa	Known RBP	3.84	□□□□□ -1.79
LPP-222	ENST00000640853	HDAC5	Q9UQL6	1122 aa		3.84	□□□□□ -1.79
LPP-222	ENST00000640853	PANK3	Q9H999	370 aa		3.84	□□□□□ -1.79
LPP-222	ENST00000640853	SKOR2	Q2VWA4	1001 aa	Predicted RBP	3.84	□□□□□ -1.79
LPP-222	ENST00000640853	PNISR	Q8TF01	805 aa	Known RBP	3.84	□□□□□ -1.79
LPP-222	ENST00000640853	MSN	P26038	577 aa	Known RBP	3.84	□□□□□ -1.79
LPP-222	ENST00000640853	OSCAR	Q8IYS5	282 aa		3.84	□□□□□ -1.8
LPP-222	ENST00000640853	EXOC6	Q8TAG9	804 aa		3.84	□□□□□ -1.8
LPP-222	ENST00000640853	CENPQ	Q7L2Z9	268 aa	Predicted RBP	3.84	□□□□□ -1.8
LPP-222	ENST00000640853	IL27	Q8NEV9	243 aa		3.84	□□□□□ -1.8
LPP-222	ENST00000640853	ZNF428	Q96B54	188 aa		3.84	□□□□□ -1.8
LPP-222	ENST00000640853	POGK	Q9P215	609 aa		3.84	□□□□□ -1.8
LPP-222	ENST00000640853	CCDC9	Q9Y3X0	531 aa	Known RBP	3.84	□□□□□ -1.8
LPP-222	ENST00000640853	KIAA2012	Q0VF49	1180 aa		3.84	□□□□□ -1.8
LPP-222	ENST00000640853	SAFB2	Q14151	953 aa	Known RBP eCLIP	3.84	□□□□□ -1.8
LPP-222	ENST00000640853	NUTM2D	Q5VT03	806 aa	Predicted RBP	3.84	□□□□□ -1.8
LPP-222	ENST00000640853	SYAP1	Q96A49	352 aa	Predicted RBP	3.83	□□□□□ -1.8
LPP-222	ENST00000640853	IGF1R	P08069	1367 aa		3.83	□□□□□ -1.8
LPP-222	ENST00000640853	CSPP1	Q1MSJ5	1256 aa		3.83	□□□□□ -1.8
LPP-222	ENST00000640853	NGEF	Q8N5V2	710 aa		3.83	□□□□□ -1.8
LPP-222	ENST00000640853	STK26	Q9P289	416 aa		3.83	□□□□□ -1.8
LPP-222	ENST00000640853	GSE1	Q14687	1217 aa		3.83	□□□□□ -1.8
LPP-222	ENST00000640853	CRBN	Q96SW2	442 aa		3.83	□□□□□ -1.8

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