RNA–Protein interactions for RNA: ENST00000640610.1

PAX6-273, Transcript of paired box 6, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PAX6, Length 2,730 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-273ENST00000640610 NCOA2Q15596 1464 aa13.54□□□□□ -0.24
PAX6-273ENST00000640610 EHBP1L1Q8N3D4 1523 aa13.54□□□□□ -0.24
PAX6-273ENST00000640610 ZCCHC11Q5TAX3 1644 aaKnown RBP13.53□□□□□ -0.24
PAX6-273ENST00000640610 SUPT6HQ7KZ85 1726 aaKnown RBP13.52□□□□□ -0.25
PAX6-273ENST00000640610 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.51□□□□□ -0.25
PAX6-273ENST00000640610 HIRIP3Q9BW71 556 aaPredicted RBP13.51□□□□□ -0.25
PAX6-273ENST00000640610 KDM5BQ9UGL1 1544 aa13.51□□□□□ -0.25
PAX6-273ENST00000640610 CDK11AQ9UQ88 783 aaPredicted RBP13.51□□□□□ -0.25
PAX6-273ENST00000640610 CYB5RLQ6IPT4 315 aa13.5□□□□□ -0.25
PAX6-273ENST00000640610 MYOM3Q5VTT5 1437 aa13.5□□□□□ -0.25
PAX6-273ENST00000640610 KCNH8Q96L42 1107 aa13.49□□□□□ -0.25
PAX6-273ENST00000640610 PLEKHD1A6NEE1 506 aa13.48□□□□□ -0.25
PAX6-273ENST00000640610 TROQ12816 1431 aaPredicted RBP13.48□□□□□ -0.25
PAX6-273ENST00000640610 KIF14Q15058 1648 aa13.47□□□□□ -0.25
PAX6-273ENST00000640610 PIAS4Q8N2W9 510 aaPredicted RBP13.47□□□□□ -0.25
PAX6-273ENST00000640610 CHIC2Q9UKJ5 165 aa13.47□□□□□ -0.25
PAX6-273ENST00000640610 HFM1A2PYH4 1435 aa13.46□□□□□ -0.26
PAX6-273ENST00000640610 PTPN23Q9H3S7 1636 aa13.45□□□□□ -0.26
PAX6-273ENST00000640610 NAIPQ13075 1403 aa13.45□□□□□ -0.26
PAX6-273ENST00000640610 DDX10Q13206 875 aaKnown RBP13.45□□□□□ -0.26
PAX6-273ENST00000640610 RRP7BPQ9NSQ0 103 aa13.45□□□□□ -0.26
PAX6-273ENST00000640610 PPP1R15AO75807 674 aaPredicted RBP13.44□□□□□ -0.26
PAX6-273ENST00000640610 NPM1P06748 294 aaKnown RBP eCLIP13.41□□□□□ -0.26
PAX6-273ENST00000640610 ABCC10Q5T3U5 1492 aa13.4□□□□□ -0.27
PAX6-273ENST00000640610 ASXL2Q76L83 1435 aa13.39□□□□□ -0.27
PAX6-273ENST00000640610 CDC42BPAQ5VT25 1732 aa13.39□□□□□ -0.27
PAX6-273ENST00000640610 WDR7Q9Y4E6 1490 aa13.39□□□□□ -0.27
PAX6-273ENST00000640610 TONSLQ96HA7 1378 aa13.38□□□□□ -0.27
PAX6-273ENST00000640610 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.38□□□□□ -0.27
PAX6-273ENST00000640610 KDM6BO15054 1643 aa13.38□□□□□ -0.27
PAX6-273ENST00000640610 TTC37Q6PGP7 1564 aa13.37□□□□□ -0.27
PAX6-273ENST00000640610 FKBP8Q14318 412 aa13.37□□□□□ -0.27
PAX6-273ENST00000640610 TIMELESSQ9UNS1 1208 aa13.37□□□□□ -0.27
PAX6-273ENST00000640610 GPATCH8Q9UKJ3 1502 aaKnown RBP13.37□□□□□ -0.27
PAX6-273ENST00000640610 ITSN2Q9NZM3 1697 aa13.37□□□□□ -0.27
PAX6-273ENST00000640610 BCANQ96GW7 911 aa13.36□□□□□ -0.27
PAX6-273ENST00000640610 RBM19Q9Y4C8 960 aaKnown RBP13.36□□□□□ -0.27
PAX6-273ENST00000640610 TCOF1Q13428 1488 aaKnown RBP13.36□□□□□ -0.27
PAX6-273ENST00000640610 NEFLP07196 543 aa13.36□□□□□ -0.27
PAX6-273ENST00000640610 DENND4BO75064 1496 aaPredicted RBP13.35□□□□□ -0.27
PAX6-273ENST00000640610 CDC42BPBQ9Y5S2 1711 aa13.35□□□□□ -0.27
PAX6-273ENST00000640610 TRIM52Q96A61 297 aa13.34□□□□□ -0.27
PAX6-273ENST00000640610 ZNF644Q9H582 1327 aaPredicted RBP13.34□□□□□ -0.27
PAX6-273ENST00000640610 MIA2Q96PC5 1412 aa13.34□□□□□ -0.27
PAX6-273ENST00000640610 MYO5CQ9NQX4 1742 aa13.34□□□□□ -0.27
PAX6-273ENST00000640610 DNAJC5Q9H3Z4 198 aa13.33□□□□□ -0.28
PAX6-273ENST00000640610 PREX2Q70Z35 1606 aa13.33□□□□□ -0.28
PAX6-273ENST00000640610 CFDP1Q9UEE9 299 aaPredicted RBP13.32□□□□□ -0.28
PAX6-273ENST00000640610 ABCA9Q8IUA7 1624 aa13.31□□□□□ -0.28
PAX6-273ENST00000640610 ZNF777Q9ULD5 760 aaPredicted RBP13.3□□□□□ -0.28
PAX6-273ENST00000640610 GCC2Q8IWJ2 1684 aa13.29□□□□□ -0.28
PAX6-273ENST00000640610 CAMSAP2Q08AD1 1489 aa13.28□□□□□ -0.28
PAX6-273ENST00000640610 ARHGAP5Q13017 1502 aa13.28□□□□□ -0.28
PAX6-273ENST00000640610 PLCH2O75038 1416 aa13.27□□□□□ -0.29
PAX6-273ENST00000640610 MPHOSPH9Q99550 1183 aa13.27□□□□□ -0.29
PAX6-273ENST00000640610 SAMD9LQ8IVG5 1584 aa13.26□□□□□ -0.29
PAX6-273ENST00000640610 ADRA2BP18089 450 aa13.26□□□□□ -0.29
PAX6-273ENST00000640610 DAPK1P53355 1430 aa13.26□□□□□ -0.29
PAX6-273ENST00000640610 ABCC5O15440 1437 aa13.25□□□□□ -0.29
PAX6-273ENST00000640610 CCER2I3L3R5 266 aa13.25□□□□□ -0.29
PAX6-273ENST00000640610 PPP6R1Q9UPN7 881 aa13.25□□□□□ -0.29
PAX6-273ENST00000640610 AKNAQ7Z591 1439 aa13.24□□□□□ -0.29
PAX6-273ENST00000640610 DNMT1P26358 1616 aaKnown RBP13.24□□□□□ -0.29
PAX6-273ENST00000640610 DIP2BQ9P265 1576 aa13.23□□□□□ -0.29
PAX6-273ENST00000640610 FANCIQ9NVI1 1328 aa13.23□□□□□ -0.29
PAX6-273ENST00000640610 ARAP3Q8WWN8 1544 aa13.23□□□□□ -0.29
PAX6-273ENST00000640610 CD109Q6YHK3 1445 aa13.22□□□□□ -0.29
PAX6-273ENST00000640610 ANP32CO43423 234 aa13.22□□□□□ -0.29
PAX6-273ENST00000640610 MAP3K4Q9Y6R4 1608 aa13.22□□□□□ -0.29
PAX6-273ENST00000640610 GLI2P10070 1586 aa13.22□□□□□ -0.29
PAX6-273ENST00000640610 EFCAB2Q5VUJ9 269 aa13.22□□□□□ -0.29
PAX6-273ENST00000640610 HSPA5P11021 654 aaKnown RBP13.21□□□□□ -0.29
PAX6-273ENST00000640610 HNRNPMP52272 730 aaKnown RBP eCLIP13.21□□□□□ -0.29
PAX6-273ENST00000640610 L3MBTL2Q969R5 705 aa13.21□□□□□ -0.29
PAX6-273ENST00000640610 MYT1LQ9UL68 1186 aa13.21□□□□□ -0.29
PAX6-273ENST00000640610 KIF13AQ9H1H9 1805 aa13.21□□□□□ -0.29
PAX6-273ENST00000640610 FANCAO15360 1455 aa13.21□□□□□ -0.3
PAX6-273ENST00000640610 FAM69CQ0P6D2 419 aa13.2□□□□□ -0.3
PAX6-273ENST00000640610 CROCC2H7BZ55 1655 aa13.2□□□□□ -0.3
PAX6-273ENST00000640610 SYCP2Q9BX26 1530 aa13.2□□□□□ -0.3
PAX6-273ENST00000640610 MBD5Q9P267 1494 aa13.2□□□□□ -0.3
PAX6-273ENST00000640610 ARHGEF12Q9NZN5 1544 aa13.19□□□□□ -0.3
PAX6-273ENST00000640610 PRKCSHP14314 528 aaPredicted RBP13.19□□□□□ -0.3
PAX6-273ENST00000640610 TSPOAP1O95153 1857 aa13.19□□□□□ -0.3
PAX6-273ENST00000640610 ARHGEF5Q12774 1597 aa13.18□□□□□ -0.3
PAX6-273ENST00000640610 WASHC2AQ641Q2 1341 aa13.18□□□□□ -0.3
PAX6-273ENST00000640610 ROCK1Q13464 1354 aa13.18□□□□□ -0.3
PAX6-273ENST00000640610 ABCC1P33527 1531 aa13.18□□□□□ -0.3
PAX6-273ENST00000640610 ERICH6Q7L0X2 663 aa13.18□□□□□ -0.3
PAX6-273ENST00000640610 KIAA1107Q9UPP5 1409 aa13.17□□□□□ -0.3
PAX6-273ENST00000640610 PLEKHH2Q8IVE3 1493 aa13.17□□□□□ -0.3
PAX6-273ENST00000640610 ANKRD30BQ9BXX2 1392 aa13.17□□□□□ -0.3
PAX6-273ENST00000640610 SLC4A1APQ9BWU0 796 aaKnown RBP13.17□□□□□ -0.3
PAX6-273ENST00000640610 NBPF8Q3BBV2 869 aa13.16□□□□□ -0.3
PAX6-273ENST00000640610 POTEDQ86YR6 584 aa13.16□□□□□ -0.3
PAX6-273ENST00000640610 PPRC1Q5VV67 1664 aaKnown RBP13.15□□□□□ -0.3
PAX6-273ENST00000640610 ADGBQ8N7X0 1667 aa13.15□□□□□ -0.3
PAX6-273ENST00000640610 C11orf95C9JLR9 678 aaPredicted RBP13.15□□□□□ -0.3
PAX6-273ENST00000640610 CFAP74Q9C0B2 1584 aa13.15□□□□□ -0.3
PAX6-273ENST00000640610 CCDC141Q6ZP82 1450 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms