RNA–Protein interactions for RNA: ENST00000640141.1

KCNMA1-278, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene KCNMA1, Length 5,705 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-278ENST00000640141 RTF1Q92541 710 aaKnown RBP23.47■■□□□ 1.35
KCNMA1-278ENST00000640141 NOP58Q9Y2X3 529 aaKnown RBP23.46■■□□□ 1.35
KCNMA1-278ENST00000640141 KTN1Q86UP2 1357 aaKnown RBP23.45■■□□□ 1.35
KCNMA1-278ENST00000640141 CFAP44Q96MT7 982 aa23.45■■□□□ 1.34
KCNMA1-278ENST00000640141 EFCAB2Q5VUJ9 269 aa23.43■■□□□ 1.34
KCNMA1-278ENST00000640141 STK26Q9P289 416 aa23.43■■□□□ 1.34
KCNMA1-278ENST00000640141 NAP1L2Q9ULW6 460 aaPredicted RBP23.43■■□□□ 1.34
KCNMA1-278ENST00000640141 HSCBQ8IWL3 235 aa23.42■■□□□ 1.34
KCNMA1-278ENST00000640141 PLCB2Q00722 1185 aa23.42■■□□□ 1.34
KCNMA1-278ENST00000640141 MCCP23508 829 aa23.42■■□□□ 1.34
KCNMA1-278ENST00000640141 GOLGA6L6A8MZA4 724 aa23.42■■□□□ 1.34
KCNMA1-278ENST00000640141 PDS5BQ9NTI5 1447 aa23.41■■□□□ 1.34
KCNMA1-278ENST00000640141 TAOK2Q9UL54 1235 aa23.41■■□□□ 1.34
KCNMA1-278ENST00000640141 IPO8O15397 1037 aaKnown RBP23.41■■□□□ 1.34
KCNMA1-278ENST00000640141 TULP1O00294 542 aaPredicted RBP23.4■■□□□ 1.34
KCNMA1-278ENST00000640141 FMN1Q68DA7 1419 aa23.4■■□□□ 1.34
KCNMA1-278ENST00000640141 GOLGA6L4A6NEF3 574 aa23.39■■□□□ 1.33
KCNMA1-278ENST00000640141 NRDCO43847 1150 aa23.38■■□□□ 1.33
KCNMA1-278ENST00000640141 CALD1Q05682 793 aaKnown RBP23.38■■□□□ 1.33
KCNMA1-278ENST00000640141 KANK4Q5T7N3 995 aaPredicted RBP23.37■■□□□ 1.33
KCNMA1-278ENST00000640141 NUP155O75694 1391 aa23.37■■□□□ 1.33
KCNMA1-278ENST00000640141 ANKRD30AQ9BXX3 1397 aa23.37■■□□□ 1.33
KCNMA1-278ENST00000640141 MPHOSPH9Q99550 1183 aa23.36■■□□□ 1.33
KCNMA1-278ENST00000640141 FOXD1Q16676 465 aa23.35■■□□□ 1.33
KCNMA1-278ENST00000640141 ROCK2O75116 1388 aaKnown RBP23.35■■□□□ 1.33
KCNMA1-278ENST00000640141 CCDC88BA6NC98 1476 aa23.35■■□□□ 1.33
KCNMA1-278ENST00000640141 RALBP1Q15311 655 aa23.35■■□□□ 1.33
KCNMA1-278ENST00000640141 U2AF1L5P0DN76 240 aaPredicted RBP23.33■■□□□ 1.33
KCNMA1-278ENST00000640141 U2AF1Q01081 240 aaKnown RBP eCLIP23.33■■□□□ 1.33
KCNMA1-278ENST00000640141 SMARCA2P51531 1590 aa23.31■■□□□ 1.32
KCNMA1-278ENST00000640141 TDRD9Q8NDG6 1382 aaKnown RBP23.31■■□□□ 1.32
KCNMA1-278ENST00000640141 CHMP4AQ9BY43 222 aa23.3■■□□□ 1.32
KCNMA1-278ENST00000640141 RAB3GAP2Q9H2M9 1393 aa23.29■■□□□ 1.32
KCNMA1-278ENST00000640141 EIF3AQ14152 1382 aaKnown RBP23.28■■□□□ 1.32
KCNMA1-278ENST00000640141 PAK3O75914 559 aaPredicted RBP23.28■■□□□ 1.32
KCNMA1-278ENST00000640141 RCAN3Q9UKA8 241 aa23.25■■□□□ 1.31
KCNMA1-278ENST00000640141 MROH2BQ7Z745 1585 aa23.25■■□□□ 1.31
KCNMA1-278ENST00000640141 RSPH4AQ5TD94 716 aa23.25■■□□□ 1.31
KCNMA1-278ENST00000640141 KIAA1211Q6ZU35 1233 aa23.25■■□□□ 1.31
KCNMA1-278ENST00000640141 NAP1L5Q96NT1 182 aaPredicted RBP23.25■■□□□ 1.31
KCNMA1-278ENST00000640141 RWDD1Q9H446 243 aaPredicted RBP23.24■■□□□ 1.31
KCNMA1-278ENST00000640141 KIF3BO15066 747 aa23.24■■□□□ 1.31
KCNMA1-278ENST00000640141 CSB-PGBD3P0DP91 1061 aa23.24■■□□□ 1.31
KCNMA1-278ENST00000640141 ABCC8Q09428 1581 aa23.23■■□□□ 1.31
KCNMA1-278ENST00000640141 TERF2IPQ9NYB0 399 aa23.22■■□□□ 1.31
KCNMA1-278ENST00000640141 APBB1O00213 710 aa23.21■■□□□ 1.31
KCNMA1-278ENST00000640141 ITPRIPQ8IWB1 547 aa23.2■■□□□ 1.3
KCNMA1-278ENST00000640141 L1TD1Q5T7N2 865 aaKnown RBP23.18■■□□□ 1.3
KCNMA1-278ENST00000640141 SPAG9O60271 1321 aaKnown RBP23.18■■□□□ 1.3
KCNMA1-278ENST00000640141 STK31Q9BXU1 1019 aa23.18■■□□□ 1.3
KCNMA1-278ENST00000640141 HDAC5Q9UQL6 1122 aa23.16■■□□□ 1.3
KCNMA1-278ENST00000640141 HNRNPMP52272 730 aaKnown RBP eCLIP23.15■■□□□ 1.3
KCNMA1-278ENST00000640141 CHAF1AQ13111 956 aaPredicted RBP23.15■■□□□ 1.3
KCNMA1-278ENST00000640141 GNL2Q13823 731 aaKnown RBP23.15■■□□□ 1.3
KCNMA1-278ENST00000640141 SPRYD3Q8NCJ5 442 aa23.15■■□□□ 1.3
KCNMA1-278ENST00000640141 EID1Q9Y6B2 187 aa23.14■■□□□ 1.3
KCNMA1-278ENST00000640141 ISY1Q9ULR0 285 aaKnown RBP23.14■■□□□ 1.29
KCNMA1-278ENST00000640141 L3MBTL2Q969R5 705 aa23.13■■□□□ 1.29
KCNMA1-278ENST00000640141 PMFBP1Q8TBY8 1022 aa23.13■■□□□ 1.29
KCNMA1-278ENST00000640141 TCERG1O14776 1098 aaKnown RBP23.12■■□□□ 1.29
KCNMA1-278ENST00000640141 ZNF330Q9Y3S2 320 aaPredicted RBP23.12■■□□□ 1.29
KCNMA1-278ENST00000640141 WASHC2CQ9Y4E1 1318 aa23.12■■□□□ 1.29
KCNMA1-278ENST00000640141 CCDC18Q5T9S5 1454 aa23.11■■□□□ 1.29
KCNMA1-278ENST00000640141 PTMSP20962 102 aa23.11■■□□□ 1.29
KCNMA1-278ENST00000640141 RAPGEF2Q9Y4G8 1499 aa23.11■■□□□ 1.29
KCNMA1-278ENST00000640141 NLRP13Q86W25 1043 aa23.1■■□□□ 1.29
KCNMA1-278ENST00000640141 GBP4Q96PP9 640 aa23.1■■□□□ 1.29
KCNMA1-278ENST00000640141 MSNP26038 577 aaKnown RBP23.1■■□□□ 1.29
KCNMA1-278ENST00000640141 SMC4Q9NTJ3 1288 aa23.09■■□□□ 1.29
KCNMA1-278ENST00000640141 DRC7Q8IY82 874 aa23.09■■□□□ 1.29
KCNMA1-278ENST00000640141 HMMRO75330 724 aa23.09■■□□□ 1.29
KCNMA1-278ENST00000640141 LMOD3Q0VAK6 560 aa23.08■■□□□ 1.29
KCNMA1-278ENST00000640141 RBM19Q9Y4C8 960 aaKnown RBP23.08■■□□□ 1.28
KCNMA1-278ENST00000640141 CADPSQ9ULU8 1353 aa23.07■■□□□ 1.28
KCNMA1-278ENST00000640141 NGDNQ8NEJ9 315 aaKnown RBP23.07■■□□□ 1.28
KCNMA1-278ENST00000640141 RTN4Q9NQC3 1192 aaKnown RBP23.07■■□□□ 1.28
KCNMA1-278ENST00000640141 PDE3BQ13370 1112 aa23.07■■□□□ 1.28
KCNMA1-278ENST00000640141 FHOD3Q2V2M9 1422 aa23.06■■□□□ 1.28
KCNMA1-278ENST00000640141 HTATSF1O43719 755 aaKnown RBP23.06■■□□□ 1.28
KCNMA1-278ENST00000640141 GPATCH3Q96I76 525 aa23.05■■□□□ 1.28
KCNMA1-278ENST00000640141 GORABQ5T7V8 394 aa23.05■■□□□ 1.28
KCNMA1-278ENST00000640141 JPH4Q96JJ6 628 aa23.04■■□□□ 1.28
KCNMA1-278ENST00000640141 PHLDB1Q86UU1 1377 aa23.02■■□□□ 1.28
KCNMA1-278ENST00000640141 CLSTN1O94985 981 aa23.01■■□□□ 1.27
KCNMA1-278ENST00000640141 AMPHP49418 695 aa23.01■■□□□ 1.27
KCNMA1-278ENST00000640141 TMX4Q9H1E5 349 aaPredicted RBP23.01■■□□□ 1.27
KCNMA1-278ENST00000640141 TOP2AP11388 1531 aaKnown RBP23.01■■□□□ 1.27
KCNMA1-278ENST00000640141 TAF7LQ5H9L4 462 aa23■■□□□ 1.27
KCNMA1-278ENST00000640141 CENPJQ9HC77 1338 aaPredicted RBP23■■□□□ 1.27
KCNMA1-278ENST00000640141 CHMP3Q9Y3E7 222 aa22.99■■□□□ 1.27
KCNMA1-278ENST00000640141 NUTM2DQ5VT03 806 aaPredicted RBP22.99■■□□□ 1.27
KCNMA1-278ENST00000640141 CCDC146Q8IYE0 955 aa22.98■■□□□ 1.27
KCNMA1-278ENST00000640141 CCDC9Q9Y3X0 531 aaKnown RBP22.97■■□□□ 1.27
KCNMA1-278ENST00000640141 SYAP1Q96A49 352 aaPredicted RBP22.97■■□□□ 1.27
KCNMA1-278ENST00000640141 SLC4A10Q6U841 1118 aa22.97■■□□□ 1.27
KCNMA1-278ENST00000640141 TRIM6-TRIM34B2RNG4 842 aa22.96■■□□□ 1.27
KCNMA1-278ENST00000640141 TRAK1Q9UPV9 953 aa22.96■■□□□ 1.27
KCNMA1-278ENST00000640141 CLUAP1Q96AJ1 413 aa22.96■■□□□ 1.27
KCNMA1-278ENST00000640141 SLKQ9H2G2 1235 aaPredicted RBP22.96■■□□□ 1.27
KCNMA1-278ENST00000640141 MFAP1P55081 439 aaKnown RBP22.95■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms