RNA–Protein interactions for RNA: ENST00000640101.1

SPIN3-234, Transcript of spindlin family member 3, humanhuman

TSL 5

Gene SPIN3, Length 3,070 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-234ENST00000640101 ZNF644Q9H582 1327 aaPredicted RBP16.89■□□□□ 0.29
SPIN3-234ENST00000640101 CDK13Q14004 1512 aaKnown RBP16.88■□□□□ 0.29
SPIN3-234ENST00000640101 TARBP1Q13395 1621 aaKnown RBP16.88■□□□□ 0.29
SPIN3-234ENST00000640101 C11orf95C9JLR9 678 aaPredicted RBP16.88■□□□□ 0.29
SPIN3-234ENST00000640101 B4GALNT3Q6L9W6 998 aa16.88■□□□□ 0.29
SPIN3-234ENST00000640101 EHBP1L1Q8N3D4 1523 aa16.87■□□□□ 0.29
SPIN3-234ENST00000640101 UGGT2Q9NYU1 1516 aa16.86■□□□□ 0.29
SPIN3-234ENST00000640101 FAM9BQ8IZU0 186 aa16.85■□□□□ 0.29
SPIN3-234ENST00000640101 KDM6BO15054 1643 aa16.85■□□□□ 0.29
SPIN3-234ENST00000640101 DENND4BO75064 1496 aaPredicted RBP16.83■□□□□ 0.29
SPIN3-234ENST00000640101 KDM5BQ9UGL1 1544 aa16.83■□□□□ 0.29
SPIN3-234ENST00000640101 EPRSP07814 1512 aaKnown RBP16.83■□□□□ 0.28
SPIN3-234ENST00000640101 POLR3GLQ9BT43 218 aa16.83■□□□□ 0.28
SPIN3-234ENST00000640101 THOC2Q8NI27 1593 aaKnown RBP16.83■□□□□ 0.28
SPIN3-234ENST00000640101 SLC4A1APQ9BWU0 796 aaKnown RBP16.83■□□□□ 0.28
SPIN3-234ENST00000640101 NBPF8Q3BBV2 869 aa16.82■□□□□ 0.28
SPIN3-234ENST00000640101 ZNF777Q9ULD5 760 aaPredicted RBP16.81■□□□□ 0.28
SPIN3-234ENST00000640101 ZNF326Q5BKZ1 582 aaKnown RBP16.81■□□□□ 0.28
SPIN3-234ENST00000640101 ANP32AP39687 249 aaKnown RBP16.8■□□□□ 0.28
SPIN3-234ENST00000640101 ARHGEF11O15085 1522 aa16.8■□□□□ 0.28
SPIN3-234ENST00000640101 ZBTB47Q9UFB7 747 aaPredicted RBP16.79■□□□□ 0.28
SPIN3-234ENST00000640101 SENP3-EIF4A1A0A087X0R7 540 aa16.78■□□□□ 0.28
SPIN3-234ENST00000640101 IPO9Q96P70 1041 aaKnown RBP16.78■□□□□ 0.28
SPIN3-234ENST00000640101 MRS2Q9HD23 443 aa16.78■□□□□ 0.28
SPIN3-234ENST00000640101 PBRM1Q86U86 1689 aa16.77■□□□□ 0.27
SPIN3-234ENST00000640101 FBLN2P98095 1184 aa16.76■□□□□ 0.27
SPIN3-234ENST00000640101 IQGAP2Q13576 1575 aa16.76■□□□□ 0.27
SPIN3-234ENST00000640101 TCOF1Q13428 1488 aaKnown RBP16.75■□□□□ 0.27
SPIN3-234ENST00000640101 HECW1Q76N89 1606 aa16.75■□□□□ 0.27
SPIN3-234ENST00000640101 PRKRIP1Q9H875 184 aaPredicted RBP16.75■□□□□ 0.27
SPIN3-234ENST00000640101 ZNF608Q9ULD9 1512 aaPredicted RBP16.73■□□□□ 0.27
SPIN3-234ENST00000640101 ADAMTS12P58397 1594 aa16.73■□□□□ 0.27
SPIN3-234ENST00000640101 MIA2Q96PC5 1412 aa16.72■□□□□ 0.27
SPIN3-234ENST00000640101 CCDC7Q96M83 1385 aa16.72■□□□□ 0.27
SPIN3-234ENST00000640101 EIF5BO60841 1220 aaKnown RBP16.71■□□□□ 0.27
SPIN3-234ENST00000640101 CFDP1Q9UEE9 299 aaPredicted RBP16.71■□□□□ 0.27
SPIN3-234ENST00000640101 ANKRD30BQ9BXX2 1392 aa16.71■□□□□ 0.27
SPIN3-234ENST00000640101 MRC2Q9UBG0 1479 aa16.7■□□□□ 0.26
SPIN3-234ENST00000640101 DAPK1P53355 1430 aa16.7■□□□□ 0.26
SPIN3-234ENST00000640101 CNTLNQ9NXG0 1405 aa16.7■□□□□ 0.26
SPIN3-234ENST00000640101 ABCC5O15440 1437 aa16.69■□□□□ 0.26
SPIN3-234ENST00000640101 KIF7Q2M1P5 1343 aa16.69■□□□□ 0.26
SPIN3-234ENST00000640101 WDR62O43379 1518 aa16.68■□□□□ 0.26
SPIN3-234ENST00000640101 GCC2Q8IWJ2 1684 aa16.67■□□□□ 0.26
SPIN3-234ENST00000640101 PRG4Q92954 1404 aaPredicted RBP16.66■□□□□ 0.26
SPIN3-234ENST00000640101 NCOA1Q15788 1441 aa16.65■□□□□ 0.26
SPIN3-234ENST00000640101 AKNAQ7Z591 1439 aa16.65■□□□□ 0.26
SPIN3-234ENST00000640101 CHMP7Q8WUX9 453 aaPredicted RBP16.65■□□□□ 0.26
SPIN3-234ENST00000640101 NEFMP07197 916 aa16.64■□□□□ 0.25
SPIN3-234ENST00000640101 PKD2Q13563 968 aa16.64■□□□□ 0.25
SPIN3-234ENST00000640101 RPRD2Q5VT52 1461 aaKnown RBP16.63■□□□□ 0.25
SPIN3-234ENST00000640101 NUP153P49790 1475 aaKnown RBP16.63■□□□□ 0.25
SPIN3-234ENST00000640101 LAS1LQ9Y4W2 734 aaKnown RBP16.62■□□□□ 0.25
SPIN3-234ENST00000640101 KDM2AQ9Y2K7 1162 aa16.61■□□□□ 0.25
SPIN3-234ENST00000640101 DISP1Q96F81 1524 aa16.61■□□□□ 0.25
SPIN3-234ENST00000640101 ROCK1Q13464 1354 aa16.61■□□□□ 0.25
SPIN3-234ENST00000640101 IFT140Q96RY7 1462 aa16.61■□□□□ 0.25
SPIN3-234ENST00000640101 KIAA0586Q9BVV6 1533 aa16.6■□□□□ 0.25
SPIN3-234ENST00000640101 NPM2Q86SE8 214 aaKnown RBP16.59■□□□□ 0.25
SPIN3-234ENST00000640101 PLB1Q6P1J6 1458 aa16.58■□□□□ 0.25
SPIN3-234ENST00000640101 TEX14Q8IWB6 1497 aa16.58■□□□□ 0.25
SPIN3-234ENST00000640101 BRPF3Q9ULD4 1205 aa16.58■□□□□ 0.24
SPIN3-234ENST00000640101 KIAA0556O60303 1618 aa16.57■□□□□ 0.24
SPIN3-234ENST00000640101 USP35Q9P2H5 1018 aa16.57■□□□□ 0.24
SPIN3-234ENST00000640101 ZBED9Q6R2W3 1325 aa16.56■□□□□ 0.24
SPIN3-234ENST00000640101 SPATA31E1Q6ZUB1 1445 aa16.56■□□□□ 0.24
SPIN3-234ENST00000640101 WASHC2CQ9Y4E1 1318 aa16.56■□□□□ 0.24
SPIN3-234ENST00000640101 DNMT1P26358 1616 aaKnown RBP16.55■□□□□ 0.24
SPIN3-234ENST00000640101 USP47Q96K76 1375 aa16.54■□□□□ 0.24
SPIN3-234ENST00000640101 GRIN2AQ12879 1464 aa16.54■□□□□ 0.24
SPIN3-234ENST00000640101 JPH4Q96JJ6 628 aa16.54■□□□□ 0.24
SPIN3-234ENST00000640101 PZPP20742 1482 aa16.53■□□□□ 0.24
SPIN3-234ENST00000640101 CAMSAP2Q08AD1 1489 aa16.53■□□□□ 0.24
SPIN3-234ENST00000640101 TROQ12816 1431 aaPredicted RBP16.52■□□□□ 0.24
SPIN3-234ENST00000640101 PLEKHD1A6NEE1 506 aa16.52■□□□□ 0.24
SPIN3-234ENST00000640101 CARD11Q9BXL7 1154 aa16.52■□□□□ 0.24
SPIN3-234ENST00000640101 RAPGEF6Q8TEU7 1601 aa16.52■□□□□ 0.24
SPIN3-234ENST00000640101 NUP155O75694 1391 aa16.51■□□□□ 0.23
SPIN3-234ENST00000640101 GPATCH8Q9UKJ3 1502 aaKnown RBP16.51■□□□□ 0.23
SPIN3-234ENST00000640101 HNRNPMP52272 730 aaKnown RBP eCLIP16.51■□□□□ 0.23
SPIN3-234ENST00000640101 EIF4G3O43432 1585 aaKnown RBP16.5■□□□□ 0.23
SPIN3-234ENST00000640101 DCAF11Q8TEB1 546 aa16.5■□□□□ 0.23
SPIN3-234ENST00000640101 TMC1Q8TDI8 760 aa16.49■□□□□ 0.23
SPIN3-234ENST00000640101 PKNOX2Q96KN3 472 aa16.49■□□□□ 0.23
SPIN3-234ENST00000640101 ANKRD30AQ9BXX3 1397 aa16.49■□□□□ 0.23
SPIN3-234ENST00000640101 KIAA1107Q9UPP5 1409 aa16.49■□□□□ 0.23
SPIN3-234ENST00000640101 TSPY4P0CV99 314 aa16.49■□□□□ 0.23
SPIN3-234ENST00000640101 TSPY10P0CW01 314 aa16.49■□□□□ 0.23
SPIN3-234ENST00000640101 ST20-MTHFSA0A0A6YYL1 179 aa16.48■□□□□ 0.23
SPIN3-234ENST00000640101 ANKRD50Q9ULJ7 1429 aa16.48■□□□□ 0.23
SPIN3-234ENST00000640101 PPM1GO15355 546 aaPredicted RBP16.48■□□□□ 0.23
SPIN3-234ENST00000640101 DHX29Q7Z478 1369 aaKnown RBP16.47■□□□□ 0.23
SPIN3-234ENST00000640101 KIF14Q15058 1648 aa16.47■□□□□ 0.23
SPIN3-234ENST00000640101 RGL3Q3MIN7 710 aa16.46■□□□□ 0.23
SPIN3-234ENST00000640101 GSE1Q14687 1217 aa16.45■□□□□ 0.22
SPIN3-234ENST00000640101 ERCC6Q03468 1493 aa16.45■□□□□ 0.22
SPIN3-234ENST00000640101 CEP170Q5SW79 1584 aa16.44■□□□□ 0.22
SPIN3-234ENST00000640101 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.43■□□□□ 0.22
SPIN3-234ENST00000640101 BCORL1Q5H9F3 1711 aa16.42■□□□□ 0.22
SPIN3-234ENST00000640101 PNISRQ8TF01 805 aaKnown RBP16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms