RNA–Protein interactions for RNA: ENST00000639809.1

SPIN3-229, Transcript of spindlin family member 3, humanhuman

TSL 5

Gene SPIN3, Length 1,118 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-229ENST00000639809 YEATS2Q9ULM3 1422 aa26.03■■□□□ 1.76
SPIN3-229ENST00000639809 RIMS1Q86UR5 1692 aaKnown RBP26.02■■□□□ 1.76
SPIN3-229ENST00000639809 LMTK3Q96Q04 1460 aa26.01■■□□□ 1.75
SPIN3-229ENST00000639809 MYO5CQ9NQX4 1742 aa26.01■■□□□ 1.75
SPIN3-229ENST00000639809 CLIP1P30622 1438 aa26■■□□□ 1.75
SPIN3-229ENST00000639809 TROQ12816 1431 aaPredicted RBP26■■□□□ 1.75
SPIN3-229ENST00000639809 KIF14Q15058 1648 aa25.99■■□□□ 1.75
SPIN3-229ENST00000639809 EHMT2Q96KQ7 1210 aa25.98■■□□□ 1.75
SPIN3-229ENST00000639809 ATP10AO60312 1499 aa25.97■■□□□ 1.75
SPIN3-229ENST00000639809 FBXO41Q8TF61 875 aa25.95■■□□□ 1.74
SPIN3-229ENST00000639809 ZNF518AQ6AHZ1 1483 aa25.95■■□□□ 1.74
SPIN3-229ENST00000639809 C9orf84Q5VXU9 1444 aa25.95■■□□□ 1.74
SPIN3-229ENST00000639809 SIGLEC1Q9BZZ2 1709 aa25.91■■□□□ 1.74
SPIN3-229ENST00000639809 ARHGAP5Q13017 1502 aa25.91■■□□□ 1.74
SPIN3-229ENST00000639809 CCDC18Q5T9S5 1454 aa25.9■■□□□ 1.74
SPIN3-229ENST00000639809 ARHGEF12Q9NZN5 1544 aa25.88■■□□□ 1.73
SPIN3-229ENST00000639809 FER1L4A9Z1Z3 1794 aa25.88■■□□□ 1.73
SPIN3-229ENST00000639809 KDM5CP41229 1560 aa25.88■■□□□ 1.73
SPIN3-229ENST00000639809 CASKIN1Q8WXD9 1431 aa25.88■■□□□ 1.73
SPIN3-229ENST00000639809 MLECQ14165 292 aa25.87■■□□□ 1.73
SPIN3-229ENST00000639809 LRRIQ1Q96JM4 1722 aa25.83■■□□□ 1.72
SPIN3-229ENST00000639809 AFAP1Q8N556 730 aa25.82■■□□□ 1.72
SPIN3-229ENST00000639809 REREQ9P2R6 1566 aa25.81■■□□□ 1.72
SPIN3-229ENST00000639809 MLH3Q9UHC1 1453 aa25.8■■□□□ 1.72
SPIN3-229ENST00000639809 HSPA2P54652 639 aa25.79■■□□□ 1.72
SPIN3-229ENST00000639809 PLPPR3Q6T4P5 718 aa25.79■■□□□ 1.72
SPIN3-229ENST00000639809 PREX2Q70Z35 1606 aa25.78■■□□□ 1.72
SPIN3-229ENST00000639809 CDC42BPBQ9Y5S2 1711 aa25.78■■□□□ 1.72
SPIN3-229ENST00000639809 FYCO1Q9BQS8 1478 aa25.78■■□□□ 1.72
SPIN3-229ENST00000639809 MYT1LQ9UL68 1186 aa25.77■■□□□ 1.72
SPIN3-229ENST00000639809 DIP2CQ9Y2E4 1556 aa25.75■■□□□ 1.71
SPIN3-229ENST00000639809 ABCC1P33527 1531 aa25.75■■□□□ 1.71
SPIN3-229ENST00000639809 PREX1Q8TCU6 1659 aa25.73■■□□□ 1.71
SPIN3-229ENST00000639809 AGLP35573 1532 aa25.72■■□□□ 1.71
SPIN3-229ENST00000639809 TRAPPC8Q9Y2L5 1435 aa25.7■■□□□ 1.7
SPIN3-229ENST00000639809 ABCA6Q8N139 1617 aa25.69■■□□□ 1.7
SPIN3-229ENST00000639809 ITSN2Q9NZM3 1697 aa25.68■■□□□ 1.7
SPIN3-229ENST00000639809 SETD1BQ9UPS6 1966 aaKnown RBP25.67■■□□□ 1.7
SPIN3-229ENST00000639809 UHRF1BP1Q6BDS2 1440 aa25.66■■□□□ 1.7
SPIN3-229ENST00000639809 CEBPAP49715 358 aaPredicted RBP25.66■■□□□ 1.7
SPIN3-229ENST00000639809 DMRT2Q9Y5R5 561 aa25.66■■□□□ 1.7
SPIN3-229ENST00000639809 CDC42BPAQ5VT25 1732 aa25.66■■□□□ 1.7
SPIN3-229ENST00000639809 ESF1Q9H501 851 aaKnown RBP25.65■■□□□ 1.7
SPIN3-229ENST00000639809 CNTLNQ9NXG0 1405 aa25.63■■□□□ 1.69
SPIN3-229ENST00000639809 CERKQ8TCT0 537 aa25.62■■□□□ 1.69
SPIN3-229ENST00000639809 KIDINS220Q9ULH0 1771 aa25.61■■□□□ 1.69
SPIN3-229ENST00000639809 GPATCH8Q9UKJ3 1502 aaKnown RBP25.6■■□□□ 1.69
SPIN3-229ENST00000639809 PLEKHH2Q8IVE3 1493 aa25.59■■□□□ 1.69
SPIN3-229ENST00000639809 SAMD9LQ8IVG5 1584 aa25.58■■□□□ 1.69
SPIN3-229ENST00000639809 KIAA1107Q9UPP5 1409 aa25.58■■□□□ 1.69
SPIN3-229ENST00000639809 C3P01024 1663 aa25.56■■□□□ 1.68
SPIN3-229ENST00000639809 ZNF777Q9ULD5 760 aaPredicted RBP25.56■■□□□ 1.68
SPIN3-229ENST00000639809 SPAG9O60271 1321 aaKnown RBP25.55■■□□□ 1.68
SPIN3-229ENST00000639809 SYCP2Q9BX26 1530 aa25.54■■□□□ 1.68
SPIN3-229ENST00000639809 CFDP1Q9UEE9 299 aaPredicted RBP25.53■■□□□ 1.68
SPIN3-229ENST00000639809 CCNB3Q8WWL7 1395 aa25.53■■□□□ 1.68
SPIN3-229ENST00000639809 MTUS2Q5JR59 1369 aa25.52■■□□□ 1.68
SPIN3-229ENST00000639809 STRCQ7RTU9 1775 aa25.51■■□□□ 1.67
SPIN3-229ENST00000639809 PTPRTO14522 1441 aa25.5■■□□□ 1.67
SPIN3-229ENST00000639809 NPATQ14207 1427 aa25.49■■□□□ 1.67
SPIN3-229ENST00000639809 HNRNPMP52272 730 aaKnown RBP eCLIP25.49■■□□□ 1.67
SPIN3-229ENST00000639809 MROH2AA6NES4 1674 aa25.48■■□□□ 1.67
SPIN3-229ENST00000639809 ATP7AQ04656 1500 aa25.48■■□□□ 1.67
SPIN3-229ENST00000639809 INO80Q9ULG1 1556 aaPredicted RBP25.45■■□□□ 1.66
SPIN3-229ENST00000639809 PLXNC1O60486 1568 aa25.44■■□□□ 1.66
SPIN3-229ENST00000639809 A2MP01023 1474 aa25.43■■□□□ 1.66
SPIN3-229ENST00000639809 PPP6R1Q9UPN7 881 aa25.43■■□□□ 1.66
SPIN3-229ENST00000639809 ZMYM3Q14202 1370 aa25.43■■□□□ 1.66
SPIN3-229ENST00000639809 EHBP1L1Q8N3D4 1523 aa25.42■■□□□ 1.66
SPIN3-229ENST00000639809 NCOA1Q15788 1441 aa25.4■■□□□ 1.66
SPIN3-229ENST00000639809 CEP162Q5TB80 1403 aa25.39■■□□□ 1.66
SPIN3-229ENST00000639809 SUPT6HQ7KZ85 1726 aaKnown RBP25.39■■□□□ 1.65
SPIN3-229ENST00000639809 TIAM1Q13009 1591 aa25.37■■□□□ 1.65
SPIN3-229ENST00000639809 RTEL1-TNFRSF6BF6WH68 1400 aa25.37■■□□□ 1.65
SPIN3-229ENST00000639809 ADGBQ8N7X0 1667 aa25.36■■□□□ 1.65
SPIN3-229ENST00000639809 MBD5Q9P267 1494 aa25.34■■□□□ 1.65
SPIN3-229ENST00000639809 IQSEC2Q5JU85 1478 aa25.32■■□□□ 1.64
SPIN3-229ENST00000639809 RSPH4AQ5TD94 716 aa25.31■■□□□ 1.64
SPIN3-229ENST00000639809 GGT6Q6P531 493 aa25.31■■□□□ 1.64
SPIN3-229ENST00000639809 CLTCQ00610 1675 aaKnown RBP25.31■■□□□ 1.64
SPIN3-229ENST00000639809 CAMSAP1Q5T5Y3 1602 aa25.3■■□□□ 1.64
SPIN3-229ENST00000639809 ZNF644Q9H582 1327 aaPredicted RBP25.3■■□□□ 1.64
SPIN3-229ENST00000639809 PTPRKQ15262 1439 aa25.29■■□□□ 1.64
SPIN3-229ENST00000639809 PLA2R1Q13018 1463 aa25.28■■□□□ 1.64
SPIN3-229ENST00000639809 ZNF142P52746 1687 aaPredicted RBP25.28■■□□□ 1.64
SPIN3-229ENST00000639809 DHX29Q7Z478 1369 aaKnown RBP25.28■■□□□ 1.64
SPIN3-229ENST00000639809 LTBP4Q8N2S1 1624 aa25.27■■□□□ 1.64
SPIN3-229ENST00000639809 PKD2Q13563 968 aa25.27■■□□□ 1.64
SPIN3-229ENST00000639809 FAM135AQ9P2D6 1515 aa25.25■■□□□ 1.63
SPIN3-229ENST00000639809 MYO3AQ8NEV4 1616 aa25.25■■□□□ 1.63
SPIN3-229ENST00000639809 CCDC141Q6ZP82 1450 aa25.24■■□□□ 1.63
SPIN3-229ENST00000639809 CEP170BQ9Y4F5 1589 aaPredicted RBP25.23■■□□□ 1.63
SPIN3-229ENST00000639809 NCOA2Q15596 1464 aa25.23■■□□□ 1.63
SPIN3-229ENST00000639809 CAMSAP2Q08AD1 1489 aa25.2■■□□□ 1.62
SPIN3-229ENST00000639809 TCOF1Q13428 1488 aaKnown RBP25.2■■□□□ 1.62
SPIN3-229ENST00000639809 NCKAP5LQ9HCH0 1330 aa25.18■■□□□ 1.62
SPIN3-229ENST00000639809 A2ML1A8K2U0 1454 aa25.17■■□□□ 1.62
SPIN3-229ENST00000639809 ARHGEF5Q12774 1597 aa25.15■■□□□ 1.62
SPIN3-229ENST00000639809 KIF3BO15066 747 aa25.15■■□□□ 1.62
SPIN3-229ENST00000639809 KDM5DQ9BY66 1539 aa25.15■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 126.3 ms