RNA–Protein interactions for RNA: ENST00000639038.1

NECAP1-214, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 2,423 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-214ENST00000639038 CFAP43Q8NDM7 1665 aa12.12□□□□□ -0.47
NECAP1-214ENST00000639038 ANP32EQ9BTT0 268 aa12.11□□□□□ -0.47
NECAP1-214ENST00000639038 LRRIQ1Q96JM4 1722 aa12.11□□□□□ -0.47
NECAP1-214ENST00000639038 CCDC18Q5T9S5 1454 aa12.11□□□□□ -0.47
NECAP1-214ENST00000639038 PIAS4Q8N2W9 510 aaPredicted RBP12.11□□□□□ -0.47
NECAP1-214ENST00000639038 ATP1B4Q9UN42 357 aaPredicted RBP12.11□□□□□ -0.47
NECAP1-214ENST00000639038 NUP153P49790 1475 aaKnown RBP12.11□□□□□ -0.47
NECAP1-214ENST00000639038 UACAQ9BZF9 1416 aa12.1□□□□□ -0.47
NECAP1-214ENST00000639038 RSPH4AQ5TD94 716 aa12.1□□□□□ -0.47
NECAP1-214ENST00000639038 EPRSP07814 1512 aaKnown RBP12.1□□□□□ -0.47
NECAP1-214ENST00000639038 UHRF1BP1LA0JNW5 1464 aa12.08□□□□□ -0.47
NECAP1-214ENST00000639038 ARHGEF11O15085 1522 aa12.08□□□□□ -0.47
NECAP1-214ENST00000639038 ZBTB22O15209 634 aa12.07□□□□□ -0.48
NECAP1-214ENST00000639038 ABCC2Q92887 1545 aa12.07□□□□□ -0.48
NECAP1-214ENST00000639038 LRRC9Q6ZRR7 1453 aa12.07□□□□□ -0.48
NECAP1-214ENST00000639038 BCCIPQ9P287 314 aaKnown RBP eCLIP12.07□□□□□ -0.48
NECAP1-214ENST00000639038 KANK4Q5T7N3 995 aaPredicted RBP12.06□□□□□ -0.48
NECAP1-214ENST00000639038 PPARGC1BQ86YN6 1023 aaKnown RBP12.06□□□□□ -0.48
NECAP1-214ENST00000639038 CCDC136Q96JN2 1154 aa12.05□□□□□ -0.48
NECAP1-214ENST00000639038 CDK13Q14004 1512 aaKnown RBP12.05□□□□□ -0.48
NECAP1-214ENST00000639038 RIMBP3CA6NJZ7 1639 aa12.05□□□□□ -0.48
NECAP1-214ENST00000639038 RIMBP3BA6NNM3 1639 aa12.05□□□□□ -0.48
NECAP1-214ENST00000639038 RIMBP3Q9UFD9 1639 aa12.05□□□□□ -0.48
NECAP1-214ENST00000639038 ATP10BO94823 1461 aa12.04□□□□□ -0.48
NECAP1-214ENST00000639038 POLR3GLQ9BT43 218 aa12.03□□□□□ -0.48
NECAP1-214ENST00000639038 ZNF326Q5BKZ1 582 aaKnown RBP12.02□□□□□ -0.48
NECAP1-214ENST00000639038 PUS7Q96PZ0 661 aaKnown RBP12.02□□□□□ -0.49
NECAP1-214ENST00000639038 EHBP1L1Q8N3D4 1523 aa12.02□□□□□ -0.49
NECAP1-214ENST00000639038 ADCY10Q96PN6 1610 aa12.02□□□□□ -0.49
NECAP1-214ENST00000639038 CFAP44Q96MT7 982 aa12.01□□□□□ -0.49
NECAP1-214ENST00000639038 CCDC9Q9Y3X0 531 aaKnown RBP12.01□□□□□ -0.49
NECAP1-214ENST00000639038 MAGI3Q5TCQ9 1506 aa12.01□□□□□ -0.49
NECAP1-214ENST00000639038 KDM5BQ9UGL1 1544 aa12.01□□□□□ -0.49
NECAP1-214ENST00000639038 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.01□□□□□ -0.49
NECAP1-214ENST00000639038 MTUS2Q5JR59 1369 aa12.01□□□□□ -0.49
NECAP1-214ENST00000639038 ARID3CA6NKF2 412 aa12□□□□□ -0.49
NECAP1-214ENST00000639038 ZEB1P37275 1124 aaPredicted RBP12□□□□□ -0.49
NECAP1-214ENST00000639038 AAMPQ13685 434 aa12□□□□□ -0.49
NECAP1-214ENST00000639038 ZCCHC11Q5TAX3 1644 aaKnown RBP11.98□□□□□ -0.49
NECAP1-214ENST00000639038 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.98□□□□□ -0.49
NECAP1-214ENST00000639038 HNRNPUL2Q1KMD3 747 aaKnown RBP11.98□□□□□ -0.49
NECAP1-214ENST00000639038 TROQ12816 1431 aaPredicted RBP11.98□□□□□ -0.49
NECAP1-214ENST00000639038 RSPH6AQ9H0K4 717 aa11.98□□□□□ -0.49
NECAP1-214ENST00000639038 SUPT6HQ7KZ85 1726 aaKnown RBP11.97□□□□□ -0.49
NECAP1-214ENST00000639038 PLEKHD1A6NEE1 506 aa11.97□□□□□ -0.49
NECAP1-214ENST00000639038 FKBP8Q14318 412 aa11.96□□□□□ -0.49
NECAP1-214ENST00000639038 PAXIP1Q6ZW49 1069 aaPredicted RBP11.96□□□□□ -0.49
NECAP1-214ENST00000639038 NCOA2Q15596 1464 aa11.95□□□□□ -0.5
NECAP1-214ENST00000639038 CYB5RLQ6IPT4 315 aa11.94□□□□□ -0.5
NECAP1-214ENST00000639038 PHLDB1Q86UU1 1377 aa11.93□□□□□ -0.5
NECAP1-214ENST00000639038 NPM1P06748 294 aaKnown RBP eCLIP11.92□□□□□ -0.5
NECAP1-214ENST00000639038 RRBP1Q9P2E9 1410 aaKnown RBP11.91□□□□□ -0.5
NECAP1-214ENST00000639038 KIF14Q15058 1648 aa11.91□□□□□ -0.5
NECAP1-214ENST00000639038 IRX6P78412 446 aaPredicted RBP11.9□□□□□ -0.5
NECAP1-214ENST00000639038 ABCC10Q5T3U5 1492 aa11.89□□□□□ -0.51
NECAP1-214ENST00000639038 NAP1L5Q96NT1 182 aaPredicted RBP11.89□□□□□ -0.51
NECAP1-214ENST00000639038 MYOM3Q5VTT5 1437 aa11.89□□□□□ -0.51
NECAP1-214ENST00000639038 WDR7Q9Y4E6 1490 aa11.89□□□□□ -0.51
NECAP1-214ENST00000639038 A0A0U1RQG5 324 aaPredicted RBP11.89□□□□□ -0.51
NECAP1-214ENST00000639038 ASXL2Q76L83 1435 aa11.88□□□□□ -0.51
NECAP1-214ENST00000639038 DNAJC5Q9H3Z4 198 aa11.87□□□□□ -0.51
NECAP1-214ENST00000639038 CCNB3Q8WWL7 1395 aa11.87□□□□□ -0.51
NECAP1-214ENST00000639038 FGD6Q6ZV73 1430 aa11.87□□□□□ -0.51
NECAP1-214ENST00000639038 MAPKBP1O60336 1514 aa11.87□□□□□ -0.51
NECAP1-214ENST00000639038 POTEDQ86YR6 584 aa11.87□□□□□ -0.51
NECAP1-214ENST00000639038 MIA2Q96PC5 1412 aa11.86□□□□□ -0.51
NECAP1-214ENST00000639038 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.86□□□□□ -0.51
NECAP1-214ENST00000639038 PCGF6Q9BYE7 350 aa11.86□□□□□ -0.51
NECAP1-214ENST00000639038 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.86□□□□□ -0.51
NECAP1-214ENST00000639038 GPATCH8Q9UKJ3 1502 aaKnown RBP11.86□□□□□ -0.51
NECAP1-214ENST00000639038 ITSN2Q9NZM3 1697 aa11.85□□□□□ -0.51
NECAP1-214ENST00000639038 CDC42BPAQ5VT25 1732 aa11.84□□□□□ -0.51
NECAP1-214ENST00000639038 KCNH8Q96L42 1107 aa11.84□□□□□ -0.51
NECAP1-214ENST00000639038 TCOF1Q13428 1488 aaKnown RBP11.83□□□□□ -0.51
NECAP1-214ENST00000639038 TTC37Q6PGP7 1564 aa11.83□□□□□ -0.52
NECAP1-214ENST00000639038 PTPN23Q9H3S7 1636 aa11.83□□□□□ -0.52
NECAP1-214ENST00000639038 CLSPNQ9HAW4 1339 aa11.82□□□□□ -0.52
NECAP1-214ENST00000639038 ABCA9Q8IUA7 1624 aa11.82□□□□□ -0.52
NECAP1-214ENST00000639038 PREX2Q70Z35 1606 aa11.81□□□□□ -0.52
NECAP1-214ENST00000639038 MYO5CQ9NQX4 1742 aa11.81□□□□□ -0.52
NECAP1-214ENST00000639038 ERICH6BQ5W0A0 696 aa11.81□□□□□ -0.52
NECAP1-214ENST00000639038 CFDP1Q9UEE9 299 aaPredicted RBP11.8□□□□□ -0.52
NECAP1-214ENST00000639038 PLCH2O75038 1416 aa11.8□□□□□ -0.52
NECAP1-214ENST00000639038 ARAP3Q8WWN8 1544 aa11.8□□□□□ -0.52
NECAP1-214ENST00000639038 CDC42BPBQ9Y5S2 1711 aa11.8□□□□□ -0.52
NECAP1-214ENST00000639038 RBM10P98175 930 aaKnown RBP11.79□□□□□ -0.52
NECAP1-214ENST00000639038 FAM50AQ14320 339 aaKnown RBP11.79□□□□□ -0.52
NECAP1-214ENST00000639038 TICAM2Q86XR7 235 aa11.79□□□□□ -0.52
NECAP1-214ENST00000639038 SALL2Q9Y467 1007 aaPredicted RBP11.79□□□□□ -0.52
NECAP1-214ENST00000639038 GLI2P10070 1586 aa11.78□□□□□ -0.52
NECAP1-214ENST00000639038 BRPF3Q9ULD4 1205 aa11.78□□□□□ -0.52
NECAP1-214ENST00000639038 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.77□□□□□ -0.52
NECAP1-214ENST00000639038 CAMSAP2Q08AD1 1489 aa11.77□□□□□ -0.53
NECAP1-214ENST00000639038 ARHGAP5Q13017 1502 aa11.76□□□□□ -0.53
NECAP1-214ENST00000639038 ZNF644Q9H582 1327 aaPredicted RBP11.75□□□□□ -0.53
NECAP1-214ENST00000639038 ZBTB7CA1YPR0 619 aa11.75□□□□□ -0.53
NECAP1-214ENST00000639038 EFCAB2Q5VUJ9 269 aa11.75□□□□□ -0.53
NECAP1-214ENST00000639038 NECTIN2Q92692 538 aa11.75□□□□□ -0.53
NECAP1-214ENST00000639038 SAMD9LQ8IVG5 1584 aa11.74□□□□□ -0.53
NECAP1-214ENST00000639038 DIP2BQ9P265 1576 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms