RNA–Protein interactions for RNA: ENST00000638573.1

COLCA2-206, Transcript of colorectal cancer associated 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene COLCA2, Length 1,080 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA2-206ENST00000638573 SIGLEC1Q9BZZ2 1709 aa26.55■■□□□ 1.84
COLCA2-206ENST00000638573 MYO5CQ9NQX4 1742 aa26.55■■□□□ 1.84
COLCA2-206ENST00000638573 ARHGAP5Q13017 1502 aa26.55■■□□□ 1.84
COLCA2-206ENST00000638573 ZMYM4Q5VZL5 1548 aa26.55■■□□□ 1.84
COLCA2-206ENST00000638573 ADAMTSL3P82987 1691 aa26.52■■□□□ 1.84
COLCA2-206ENST00000638573 ZFYVE16Q7Z3T8 1539 aa26.52■■□□□ 1.84
COLCA2-206ENST00000638573 LOC105371045A0A1W2PR82 267 aa26.51■■□□□ 1.83
COLCA2-206ENST00000638573 HECW2Q9P2P5 1572 aa26.5■■□□□ 1.83
COLCA2-206ENST00000638573 CEP162Q5TB80 1403 aa26.5■■□□□ 1.83
COLCA2-206ENST00000638573 AFAP1Q8N556 730 aa26.49■■□□□ 1.83
COLCA2-206ENST00000638573 BCORL1Q5H9F3 1711 aa26.48■■□□□ 1.83
COLCA2-206ENST00000638573 PTPRMP28827 1452 aa26.48■■□□□ 1.83
COLCA2-206ENST00000638573 MADDQ8WXG6 1647 aa26.47■■□□□ 1.83
COLCA2-206ENST00000638573 CDC42BPBQ9Y5S2 1711 aa26.45■■□□□ 1.83
COLCA2-206ENST00000638573 ARHGEF12Q9NZN5 1544 aa26.45■■□□□ 1.83
COLCA2-206ENST00000638573 MLECQ14165 292 aa26.44■■□□□ 1.82
COLCA2-206ENST00000638573 PREX2Q70Z35 1606 aa26.43■■□□□ 1.82
COLCA2-206ENST00000638573 TRAPPC8Q9Y2L5 1435 aa26.42■■□□□ 1.82
COLCA2-206ENST00000638573 PLPPR3Q6T4P5 718 aa26.41■■□□□ 1.82
COLCA2-206ENST00000638573 MAGI2Q86UL8 1455 aa26.41■■□□□ 1.82
COLCA2-206ENST00000638573 ZNF518AQ6AHZ1 1483 aa26.37■■□□□ 1.81
COLCA2-206ENST00000638573 ZNF777Q9ULD5 760 aaPredicted RBP26.37■■□□□ 1.81
COLCA2-206ENST00000638573 ABCC1P33527 1531 aa26.37■■□□□ 1.81
COLCA2-206ENST00000638573 KDM5CP41229 1560 aa26.37■■□□□ 1.81
COLCA2-206ENST00000638573 CDC42BPAQ5VT25 1732 aa26.36■■□□□ 1.81
COLCA2-206ENST00000638573 RIMS1Q86UR5 1692 aaKnown RBP26.36■■□□□ 1.81
COLCA2-206ENST00000638573 ATP10AO60312 1499 aa26.36■■□□□ 1.81
COLCA2-206ENST00000638573 GPATCH8Q9UKJ3 1502 aaKnown RBP26.35■■□□□ 1.81
COLCA2-206ENST00000638573 MYT1LQ9UL68 1186 aa26.34■■□□□ 1.81
COLCA2-206ENST00000638573 C9orf84Q5VXU9 1444 aa26.33■■□□□ 1.81
COLCA2-206ENST00000638573 MTUS2Q5JR59 1369 aa26.33■■□□□ 1.8
COLCA2-206ENST00000638573 SAMD9LQ8IVG5 1584 aa26.32■■□□□ 1.8
COLCA2-206ENST00000638573 DIP2CQ9Y2E4 1556 aa26.3■■□□□ 1.8
COLCA2-206ENST00000638573 ITSN2Q9NZM3 1697 aa26.29■■□□□ 1.8
COLCA2-206ENST00000638573 ABCA6Q8N139 1617 aa26.28■■□□□ 1.8
COLCA2-206ENST00000638573 HNRNPMP52272 730 aaKnown RBP eCLIP26.28■■□□□ 1.8
COLCA2-206ENST00000638573 SYCP2Q9BX26 1530 aa26.28■■□□□ 1.8
COLCA2-206ENST00000638573 CCNB3Q8WWL7 1395 aa26.26■■□□□ 1.79
COLCA2-206ENST00000638573 ZNF644Q9H582 1327 aaPredicted RBP26.26■■□□□ 1.79
COLCA2-206ENST00000638573 MLH3Q9UHC1 1453 aa26.24■■□□□ 1.79
COLCA2-206ENST00000638573 CFDP1Q9UEE9 299 aaPredicted RBP26.24■■□□□ 1.79
COLCA2-206ENST00000638573 TIAM1Q13009 1591 aa26.22■■□□□ 1.79
COLCA2-206ENST00000638573 EHBP1L1Q8N3D4 1523 aa26.21■■□□□ 1.79
COLCA2-206ENST00000638573 CEBPAP49715 358 aaPredicted RBP26.21■■□□□ 1.79
COLCA2-206ENST00000638573 LMTK3Q96Q04 1460 aa26.21■■□□□ 1.79
COLCA2-206ENST00000638573 KIDINS220Q9ULH0 1771 aa26.2■■□□□ 1.78
COLCA2-206ENST00000638573 FER1L4A9Z1Z3 1794 aa26.19■■□□□ 1.78
COLCA2-206ENST00000638573 HSPA2P54652 639 aa26.18■■□□□ 1.78
COLCA2-206ENST00000638573 VPS8Q8N3P4 1428 aa26.16■■□□□ 1.78
COLCA2-206ENST00000638573 SPAG9O60271 1321 aaKnown RBP26.14■■□□□ 1.77
COLCA2-206ENST00000638573 REREQ9P2R6 1566 aa26.13■■□□□ 1.77
COLCA2-206ENST00000638573 NCOA2Q15596 1464 aa26.12■■□□□ 1.77
COLCA2-206ENST00000638573 KIAA1107Q9UPP5 1409 aa26.12■■□□□ 1.77
COLCA2-206ENST00000638573 KANK4Q5T7N3 995 aaPredicted RBP26.1■■□□□ 1.77
COLCA2-206ENST00000638573 MBD5Q9P267 1494 aa26.08■■□□□ 1.77
COLCA2-206ENST00000638573 AGLP35573 1532 aa26.08■■□□□ 1.77
COLCA2-206ENST00000638573 ATP7AQ04656 1500 aa26.08■■□□□ 1.77
COLCA2-206ENST00000638573 PLEKHH2Q8IVE3 1493 aa26.07■■□□□ 1.76
COLCA2-206ENST00000638573 INO80Q9ULG1 1556 aaPredicted RBP26.07■■□□□ 1.76
COLCA2-206ENST00000638573 ILDR1Q86SU0 546 aaPredicted RBP26.06■■□□□ 1.76
COLCA2-206ENST00000638573 LRRC9Q6ZRR7 1453 aa26.04■■□□□ 1.76
COLCA2-206ENST00000638573 SUPT6HQ7KZ85 1726 aaKnown RBP26.02■■□□□ 1.76
COLCA2-206ENST00000638573 CAMSAP2Q08AD1 1489 aa26.01■■□□□ 1.75
COLCA2-206ENST00000638573 A2MP01023 1474 aa25.99■■□□□ 1.75
COLCA2-206ENST00000638573 PLXNC1O60486 1568 aa25.97■■□□□ 1.75
COLCA2-206ENST00000638573 C3P01024 1663 aa25.95■■□□□ 1.74
COLCA2-206ENST00000638573 ESF1Q9H501 851 aaKnown RBP25.93■■□□□ 1.74
COLCA2-206ENST00000638573 GGT6Q6P531 493 aa25.92■■□□□ 1.74
COLCA2-206ENST00000638573 CCDC141Q6ZP82 1450 aa25.91■■□□□ 1.74
COLCA2-206ENST00000638573 PREX1Q8TCU6 1659 aa25.9■■□□□ 1.74
COLCA2-206ENST00000638573 MAP3K1Q13233 1512 aa25.88■■□□□ 1.73
COLCA2-206ENST00000638573 UHRF1BP1Q6BDS2 1440 aa25.88■■□□□ 1.73
COLCA2-206ENST00000638573 RTEL1-TNFRSF6BF6WH68 1400 aa25.87■■□□□ 1.73
COLCA2-206ENST00000638573 ZMYM3Q14202 1370 aa25.86■■□□□ 1.73
COLCA2-206ENST00000638573 CNTLNQ9NXG0 1405 aa25.86■■□□□ 1.73
COLCA2-206ENST00000638573 ADGBQ8N7X0 1667 aa25.85■■□□□ 1.73
COLCA2-206ENST00000638573 DHX29Q7Z478 1369 aaKnown RBP25.84■■□□□ 1.73
COLCA2-206ENST00000638573 CLTCQ00610 1675 aaKnown RBP25.83■■□□□ 1.73
COLCA2-206ENST00000638573 MYOM3Q5VTT5 1437 aa25.83■■□□□ 1.73
COLCA2-206ENST00000638573 ARHGEF5Q12774 1597 aa25.81■■□□□ 1.72
COLCA2-206ENST00000638573 KIF3BO15066 747 aa25.8■■□□□ 1.72
COLCA2-206ENST00000638573 MROH2AA6NES4 1674 aa25.77■■□□□ 1.72
COLCA2-206ENST00000638573 PTPRKQ15262 1439 aa25.76■■□□□ 1.71
COLCA2-206ENST00000638573 STRCQ7RTU9 1775 aa25.76■■□□□ 1.71
COLCA2-206ENST00000638573 MIA2Q96PC5 1412 aa25.74■■□□□ 1.71
COLCA2-206ENST00000638573 TSPY4P0CV99 314 aa25.74■■□□□ 1.71
COLCA2-206ENST00000638573 TSPY10P0CW01 314 aa25.74■■□□□ 1.71
COLCA2-206ENST00000638573 APLP2Q06481 763 aa25.74■■□□□ 1.71
COLCA2-206ENST00000638573 RSPH4AQ5TD94 716 aa25.74■■□□□ 1.71
COLCA2-206ENST00000638573 NPATQ14207 1427 aa25.73■■□□□ 1.71
COLCA2-206ENST00000638573 FBXO31Q5XUX0 539 aaPredicted RBP25.71■■□□□ 1.71
COLCA2-206ENST00000638573 SETD1BQ9UPS6 1966 aaKnown RBP25.7■■□□□ 1.7
COLCA2-206ENST00000638573 FBXO41Q8TF61 875 aa25.68■■□□□ 1.7
COLCA2-206ENST00000638573 MAST1Q9Y2H9 1570 aa25.68■■□□□ 1.7
COLCA2-206ENST00000638573 ABCC5O15440 1437 aa25.67■■□□□ 1.7
COLCA2-206ENST00000638573 NCOA1Q15788 1441 aa25.66■■□□□ 1.7
COLCA2-206ENST00000638573 MYO3AQ8NEV4 1616 aa25.66■■□□□ 1.7
COLCA2-206ENST00000638573 PTPN23Q9H3S7 1636 aa25.66■■□□□ 1.7
COLCA2-206ENST00000638573 FGD6Q6ZV73 1430 aa25.65■■□□□ 1.7
COLCA2-206ENST00000638573 KDM5DQ9BY66 1539 aa25.64■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms