RNA–Protein interactions for RNA: ENST00000637886.1

UBE3A-226, Transcript of ubiquitin protein ligase E3A, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE3A, Length 8,725 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-226ENST00000637886 CALRP27797 417 aaKnown RBP16.34■□□□□ 0.21
UBE3A-226ENST00000637886 FRAT2O75474 233 aaPredicted RBP16.33■□□□□ 0.2
UBE3A-226ENST00000637886 CHMP3Q9Y3E7 222 aa16.32■□□□□ 0.2
UBE3A-226ENST00000637886 PTMSP20962 102 aa16.32■□□□□ 0.2
UBE3A-226ENST00000637886 TPM3P06753 285 aa16.32■□□□□ 0.2
UBE3A-226ENST00000637886 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.32■□□□□ 0.2
UBE3A-226ENST00000637886 CREBRFQ8IUR6 639 aa16.31■□□□□ 0.2
UBE3A-226ENST00000637886 CSRNP3Q8WYN3 585 aa16.31■□□□□ 0.2
UBE3A-226ENST00000637886 SOX12O15370 315 aa16.31■□□□□ 0.2
UBE3A-226ENST00000637886 PAK3O75914 559 aaPredicted RBP16.31■□□□□ 0.2
UBE3A-226ENST00000637886 GTF2E1P29083 439 aaPredicted RBP16.3■□□□□ 0.2
UBE3A-226ENST00000637886 HSP90B1P14625 803 aaKnown RBP16.3■□□□□ 0.2
UBE3A-226ENST00000637886 SYAP1Q96A49 352 aaPredicted RBP16.3■□□□□ 0.2
UBE3A-226ENST00000637886 TSR1Q2NL82 804 aaKnown RBP16.3■□□□□ 0.2
UBE3A-226ENST00000637886 ANO8Q9HCE9 1232 aaPredicted RBP16.3■□□□□ 0.2
UBE3A-226ENST00000637886 RSF1Q96T23 1441 aaPredicted RBP16.3■□□□□ 0.2
UBE3A-226ENST00000637886 IRX6P78412 446 aaPredicted RBP16.3■□□□□ 0.2
UBE3A-226ENST00000637886 TPM2P07951 284 aa16.28■□□□□ 0.2
UBE3A-226ENST00000637886 HDAC5Q9UQL6 1122 aa16.28■□□□□ 0.2
UBE3A-226ENST00000637886 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.27■□□□□ 0.2
UBE3A-226ENST00000637886 WWC1Q8IX03 1113 aa16.27■□□□□ 0.19
UBE3A-226ENST00000637886 SRPK2P78362 688 aaKnown RBP16.26■□□□□ 0.19
UBE3A-226ENST00000637886 CSPP1Q1MSJ5 1256 aa16.26■□□□□ 0.19
UBE3A-226ENST00000637886 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.26■□□□□ 0.198e-7■■■■■ 64.5
UBE3A-226ENST00000637886 ERCC6Q03468 1493 aa16.25■□□□□ 0.19
UBE3A-226ENST00000637886 CALD1Q05682 793 aaKnown RBP16.24■□□□□ 0.19
UBE3A-226ENST00000637886 RRP12Q5JTH9 1297 aaKnown RBP16.24■□□□□ 0.19
UBE3A-226ENST00000637886 AMOTL1Q8IY63 956 aa16.24■□□□□ 0.19
UBE3A-226ENST00000637886 AEBP2Q6ZN18 517 aaPredicted RBP16.24■□□□□ 0.19
UBE3A-226ENST00000637886 RGS3P49796 1198 aa16.24■□□□□ 0.19
UBE3A-226ENST00000637886 CCDC70Q6NSX1 233 aa16.24■□□□□ 0.19
UBE3A-226ENST00000637886 TPD52L1Q16890 204 aaPredicted RBP16.23■□□□□ 0.19
UBE3A-226ENST00000637886 NOL10Q9BSC4 688 aaKnown RBP16.23■□□□□ 0.19
UBE3A-226ENST00000637886 PES1O00541 588 aaKnown RBP16.22■□□□□ 0.19
UBE3A-226ENST00000637886 SPAG9O60271 1321 aaKnown RBP16.22■□□□□ 0.19
UBE3A-226ENST00000637886 SCRIBQ14160 1630 aa16.2■□□□□ 0.18
UBE3A-226ENST00000637886 MSH5O43196 834 aa16.2■□□□□ 0.18
UBE3A-226ENST00000637886 CARD11Q9BXL7 1154 aa16.2■□□□□ 0.18
UBE3A-226ENST00000637886 MEX3CQ5U5Q3 659 aaKnown RBP16.19■□□□□ 0.18
UBE3A-226ENST00000637886 KIF3AQ9Y496 699 aa16.19■□□□□ 0.18
UBE3A-226ENST00000637886 MLECQ14165 292 aa16.19■□□□□ 0.18
UBE3A-226ENST00000637886 RRP7BPQ9NSQ0 103 aa16.19■□□□□ 0.18
UBE3A-226ENST00000637886 IPO8O15397 1037 aaKnown RBP16.19■□□□□ 0.18
UBE3A-226ENST00000637886 CCDC43Q96MW1 224 aaKnown RBP16.18■□□□□ 0.18
UBE3A-226ENST00000637886 PPP4R2Q9NY27 417 aa16.18■□□□□ 0.18
UBE3A-226ENST00000637886 PHF23Q9BUL5 403 aaPredicted RBP16.17■□□□□ 0.18
UBE3A-226ENST00000637886 GBP4Q96PP9 640 aa16.17■□□□□ 0.18
UBE3A-226ENST00000637886 TPM1P09493 284 aa16.17■□□□□ 0.18
UBE3A-226ENST00000637886 AKAP17AQ02040 695 aaKnown RBP16.16■□□□□ 0.18
UBE3A-226ENST00000637886 TOMM22Q9NS69 142 aa16.15■□□□□ 0.18
UBE3A-226ENST00000637886 R3HCC1Q9Y3T6 440 aaKnown RBP16.15■□□□□ 0.18
UBE3A-226ENST00000637886 PHF14O94880 888 aa16.14■□□□□ 0.18
UBE3A-226ENST00000637886 ODF2Q5BJF6 829 aa16.14■□□□□ 0.18
UBE3A-226ENST00000637886 HDGFL2Q7Z4V5 671 aaPredicted RBP16.14■□□□□ 0.18
UBE3A-226ENST00000637886 WWC2Q6AWC2 1192 aa16.14■□□□□ 0.17
UBE3A-226ENST00000637886 CFDP1Q9UEE9 299 aaPredicted RBP16.13■□□□□ 0.17
UBE3A-226ENST00000637886 RAD21O60216 631 aa16.12■□□□□ 0.17
UBE3A-226ENST00000637886 PAF1Q8N7H5 531 aa16.12■□□□□ 0.17
UBE3A-226ENST00000637886 PATL2C9JE40 543 aaKnown RBP16.12■□□□□ 0.17
UBE3A-226ENST00000637886 CHMP4CQ96CF2 233 aa16.11■□□□□ 0.17
UBE3A-226ENST00000637886 STK31Q9BXU1 1019 aa16.11■□□□□ 0.17
UBE3A-226ENST00000637886 APBB1O00213 710 aa16.11■□□□□ 0.17
UBE3A-226ENST00000637886 FOXD1Q16676 465 aa16.11■□□□□ 0.17
UBE3A-226ENST00000637886 TRIM6-TRIM34B2RNG4 842 aa16.1■□□□□ 0.17
UBE3A-226ENST00000637886 CC2D1BQ5T0F9 858 aaKnown RBP16.1■□□□□ 0.17
UBE3A-226ENST00000637886 SF3A1Q15459 793 aaKnown RBP16.09■□□□□ 0.17
UBE3A-226ENST00000637886 RDXP35241 583 aaKnown RBP16.09■□□□□ 0.17
UBE3A-226ENST00000637886 LRRFIP1Q32MZ4 808 aaKnown RBP16.09■□□□□ 0.17
UBE3A-226ENST00000637886 TMF1P82094 1093 aa16.08■□□□□ 0.17
UBE3A-226ENST00000637886 MORC1Q86VD1 984 aa16.08■□□□□ 0.16
UBE3A-226ENST00000637886 GPS2Q13227 327 aa16.07■□□□□ 0.16
UBE3A-226ENST00000637886 KLHL34Q8N239 644 aa16.07■□□□□ 0.16
UBE3A-226ENST00000637886 CT47A1Q5JQC4 288 aaPredicted RBP16.07■□□□□ 0.16
UBE3A-226ENST00000637886 EVA1CP58658 441 aa16.07■□□□□ 0.16
UBE3A-226ENST00000637886 CCAR1Q8IX12 1150 aaKnown RBP16.07■□□□□ 0.16
UBE3A-226ENST00000637886 KIF16BQ96L93 1317 aa16.06■□□□□ 0.16
UBE3A-226ENST00000637886 SPRYD3Q8NCJ5 442 aa16.06■□□□□ 0.16
UBE3A-226ENST00000637886 CCDC47Q96A33 483 aaKnown RBP16.06■□□□□ 0.16
UBE3A-226ENST00000637886 IPO7O95373 1038 aaKnown RBP16.06■□□□□ 0.16
UBE3A-226ENST00000637886 CLIP1P30622 1438 aa16.05■□□□□ 0.16
UBE3A-226ENST00000637886 HMMRO75330 724 aa16.05■□□□□ 0.16
UBE3A-226ENST00000637886 SYNE3Q6ZMZ3 975 aa16.05■□□□□ 0.16
UBE3A-226ENST00000637886 EID1Q9Y6B2 187 aa16.05■□□□□ 0.16
UBE3A-226ENST00000637886 CCDC180Q9P1Z9 1646 aa16.04■□□□□ 0.16
UBE3A-226ENST00000637886 VPS37DQ86XT2 251 aa16.04■□□□□ 0.16
UBE3A-226ENST00000637886 HIRIP3Q9BW71 556 aaPredicted RBP16.04■□□□□ 0.16
UBE3A-226ENST00000637886 ANKRD20A12PQ8NF67 263 aa16.04■□□□□ 0.16
UBE3A-226ENST00000637886 H3BQV1 296 aa16.03■□□□□ 0.16
UBE3A-226ENST00000637886 IFFO2Q5TF58 517 aa16.03■□□□□ 0.16
UBE3A-226ENST00000637886 PCMTD1Q96MG8 357 aaPredicted RBP16.03■□□□□ 0.16
UBE3A-226ENST00000637886 WASHC2AQ641Q2 1341 aa16.02■□□□□ 0.16
UBE3A-226ENST00000637886 FBXW7Q969H0 707 aa16.02■□□□□ 0.15
UBE3A-226ENST00000637886 SAFB2Q14151 953 aaKnown RBP eCLIP16.01■□□□□ 0.152e-6■■■□□ 15.5
UBE3A-226ENST00000637886 NOP58Q9Y2X3 529 aaKnown RBP16.01■□□□□ 0.15
UBE3A-226ENST00000637886 RTN4Q9NQC3 1192 aaKnown RBP16■□□□□ 0.15
UBE3A-226ENST00000637886 HOOK1Q9UJC3 728 aaKnown RBP16■□□□□ 0.15
UBE3A-226ENST00000637886 CDR1P51861 262 aa15.99■□□□□ 0.15
UBE3A-226ENST00000637886 STK26Q9P289 416 aa15.98■□□□□ 0.15
UBE3A-226ENST00000637886 CCAR2Q8N163 923 aaKnown RBP15.98■□□□□ 0.15
UBE3A-226ENST00000637886 DHX16O60231 1041 aaKnown RBP15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms