RNA–Protein interactions for RNA: ENST00000637158.1

CTSD-209, Transcript of cathepsin D, humanhuman

TSL 5

Gene CTSD, Length 1,200 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-209ENST00000637158 ARHGAP35Q9NRY4 1499 aa30.06■■■□□ 2.4
CTSD-209ENST00000637158 YEATS2Q9ULM3 1422 aa30.05■■■□□ 2.4
CTSD-209ENST00000637158 LMTK3Q96Q04 1460 aa30.05■■■□□ 2.4
CTSD-209ENST00000637158 RIMS1Q86UR5 1692 aaKnown RBP30.04■■■□□ 2.4
CTSD-209ENST00000637158 CHIC1Q5VXU3 224 aa30.02■■■□□ 2.4
CTSD-209ENST00000637158 CLIP1P30622 1438 aa29.98■■■□□ 2.39
CTSD-209ENST00000637158 MYO5CQ9NQX4 1742 aa29.97■■■□□ 2.39
CTSD-209ENST00000637158 MLECQ14165 292 aa29.97■■■□□ 2.39
CTSD-209ENST00000637158 ATP10AO60312 1499 aa29.97■■■□□ 2.39
CTSD-209ENST00000637158 TROQ12816 1431 aaPredicted RBP29.96■■■□□ 2.39
CTSD-209ENST00000637158 KIF14Q15058 1648 aa29.95■■■□□ 2.38
CTSD-209ENST00000637158 PLPPR3Q6T4P5 718 aa29.94■■■□□ 2.38
CTSD-209ENST00000637158 C9orf84Q5VXU9 1444 aa29.93■■■□□ 2.38
CTSD-209ENST00000637158 ZNF518AQ6AHZ1 1483 aa29.93■■■□□ 2.38
CTSD-209ENST00000637158 SIGLEC1Q9BZZ2 1709 aa29.9■■■□□ 2.38
CTSD-209ENST00000637158 ARHGAP5Q13017 1502 aa29.89■■■□□ 2.38
CTSD-209ENST00000637158 HSPA2P54652 639 aa29.88■■■□□ 2.37
CTSD-209ENST00000637158 FER1L4A9Z1Z3 1794 aa29.87■■■□□ 2.37
CTSD-209ENST00000637158 AFAP1Q8N556 730 aa29.85■■■□□ 2.37
CTSD-209ENST00000637158 ARHGEF12Q9NZN5 1544 aa29.85■■■□□ 2.37
CTSD-209ENST00000637158 MYT1LQ9UL68 1186 aa29.84■■■□□ 2.37
CTSD-209ENST00000637158 KDM5CP41229 1560 aa29.81■■■□□ 2.36
CTSD-209ENST00000637158 CCDC18Q5T9S5 1454 aa29.81■■■□□ 2.36
CTSD-209ENST00000637158 CASKIN1Q8WXD9 1431 aa29.8■■■□□ 2.36
CTSD-209ENST00000637158 MLH3Q9UHC1 1453 aa29.75■■■□□ 2.35
CTSD-209ENST00000637158 LRRIQ1Q96JM4 1722 aa29.75■■■□□ 2.35
CTSD-209ENST00000637158 CDC42BPBQ9Y5S2 1711 aa29.72■■■□□ 2.35
CTSD-209ENST00000637158 REREQ9P2R6 1566 aa29.72■■■□□ 2.35
CTSD-209ENST00000637158 CEBPAP49715 358 aaPredicted RBP29.71■■■□□ 2.35
CTSD-209ENST00000637158 DIP2CQ9Y2E4 1556 aa29.69■■■□□ 2.34
CTSD-209ENST00000637158 PREX2Q70Z35 1606 aa29.69■■■□□ 2.34
CTSD-209ENST00000637158 PREX1Q8TCU6 1659 aa29.69■■■□□ 2.34
CTSD-209ENST00000637158 ESF1Q9H501 851 aaKnown RBP29.68■■■□□ 2.34
CTSD-209ENST00000637158 DMRT2Q9Y5R5 561 aa29.68■■■□□ 2.34
CTSD-209ENST00000637158 ABCC1P33527 1531 aa29.66■■■□□ 2.34
CTSD-209ENST00000637158 CERKQ8TCT0 537 aa29.66■■■□□ 2.34
CTSD-209ENST00000637158 FYCO1Q9BQS8 1478 aa29.66■■■□□ 2.34
CTSD-209ENST00000637158 TRAPPC8Q9Y2L5 1435 aa29.65■■■□□ 2.34
CTSD-209ENST00000637158 AGLP35573 1532 aa29.64■■■□□ 2.34
CTSD-209ENST00000637158 UHRF1BP1Q6BDS2 1440 aa29.63■■■□□ 2.33
CTSD-209ENST00000637158 SETD1BQ9UPS6 1966 aaKnown RBP29.63■■■□□ 2.33
CTSD-209ENST00000637158 ABCA6Q8N139 1617 aa29.62■■■□□ 2.33
CTSD-209ENST00000637158 ITSN2Q9NZM3 1697 aa29.6■■■□□ 2.33
CTSD-209ENST00000637158 ZNF777Q9ULD5 760 aaPredicted RBP29.56■■■□□ 2.32
CTSD-209ENST00000637158 CDC42BPAQ5VT25 1732 aa29.56■■■□□ 2.32
CTSD-209ENST00000637158 CNTLNQ9NXG0 1405 aa29.55■■■□□ 2.32
CTSD-209ENST00000637158 KIDINS220Q9ULH0 1771 aa29.52■■■□□ 2.32
CTSD-209ENST00000637158 GPATCH8Q9UKJ3 1502 aaKnown RBP29.51■■■□□ 2.32
CTSD-209ENST00000637158 SPAG9O60271 1321 aaKnown RBP29.5■■■□□ 2.31
CTSD-209ENST00000637158 C3P01024 1663 aa29.5■■■□□ 2.31
CTSD-209ENST00000637158 CFDP1Q9UEE9 299 aaPredicted RBP29.49■■■□□ 2.31
CTSD-209ENST00000637158 SAMD9LQ8IVG5 1584 aa29.48■■■□□ 2.31
CTSD-209ENST00000637158 KIAA1107Q9UPP5 1409 aa29.48■■■□□ 2.31
CTSD-209ENST00000637158 PLEKHH2Q8IVE3 1493 aa29.48■■■□□ 2.31
CTSD-209ENST00000637158 HNRNPMP52272 730 aaKnown RBP eCLIP29.47■■■□□ 2.31
CTSD-209ENST00000637158 STRCQ7RTU9 1775 aa29.47■■■□□ 2.31
CTSD-209ENST00000637158 CCNB3Q8WWL7 1395 aa29.45■■■□□ 2.31
CTSD-209ENST00000637158 SYCP2Q9BX26 1530 aa29.45■■■□□ 2.3
CTSD-209ENST00000637158 PTPRTO14522 1441 aa29.44■■■□□ 2.3
CTSD-209ENST00000637158 MTUS2Q5JR59 1369 aa29.42■■■□□ 2.3
CTSD-209ENST00000637158 NPATQ14207 1427 aa29.4■■■□□ 2.3
CTSD-209ENST00000637158 ZMYM3Q14202 1370 aa29.39■■■□□ 2.29
CTSD-209ENST00000637158 ATP7AQ04656 1500 aa29.37■■■□□ 2.29
CTSD-209ENST00000637158 MROH2AA6NES4 1674 aa29.36■■■□□ 2.29
CTSD-209ENST00000637158 PPP6R1Q9UPN7 881 aa29.34■■■□□ 2.29
CTSD-209ENST00000637158 A2MP01023 1474 aa29.34■■■□□ 2.29
CTSD-209ENST00000637158 INO80Q9ULG1 1556 aaPredicted RBP29.31■■■□□ 2.28
CTSD-209ENST00000637158 NCOA1Q15788 1441 aa29.31■■■□□ 2.28
CTSD-209ENST00000637158 SUPT6HQ7KZ85 1726 aaKnown RBP29.31■■■□□ 2.28
CTSD-209ENST00000637158 PLXNC1O60486 1568 aa29.3■■■□□ 2.28
CTSD-209ENST00000637158 GGT6Q6P531 493 aa29.28■■■□□ 2.28
CTSD-209ENST00000637158 EHBP1L1Q8N3D4 1523 aa29.25■■■□□ 2.27
CTSD-209ENST00000637158 CEP162Q5TB80 1403 aa29.24■■■□□ 2.27
CTSD-209ENST00000637158 RTEL1-TNFRSF6BF6WH68 1400 aa29.23■■■□□ 2.27
CTSD-209ENST00000637158 CAMSAP1Q5T5Y3 1602 aa29.23■■■□□ 2.27
CTSD-209ENST00000637158 ZNF644Q9H582 1327 aaPredicted RBP29.22■■■□□ 2.27
CTSD-209ENST00000637158 IQSEC2Q5JU85 1478 aa29.22■■■□□ 2.27
CTSD-209ENST00000637158 CLTCQ00610 1675 aaKnown RBP29.21■■■□□ 2.27
CTSD-209ENST00000637158 MBD5Q9P267 1494 aa29.21■■■□□ 2.27
CTSD-209ENST00000637158 TIAM1Q13009 1591 aa29.21■■■□□ 2.27
CTSD-209ENST00000637158 ADGBQ8N7X0 1667 aa29.21■■■□□ 2.27
CTSD-209ENST00000637158 PTPRKQ15262 1439 aa29.2■■■□□ 2.26
CTSD-209ENST00000637158 PKD2Q13563 968 aa29.19■■■□□ 2.26
CTSD-209ENST00000637158 RSPH4AQ5TD94 716 aa29.19■■■□□ 2.26
CTSD-209ENST00000637158 LTBP4Q8N2S1 1624 aa29.19■■■□□ 2.26
CTSD-209ENST00000637158 PLA2R1Q13018 1463 aa29.17■■■□□ 2.26
CTSD-209ENST00000637158 DHX29Q7Z478 1369 aaKnown RBP29.16■■■□□ 2.26
CTSD-209ENST00000637158 NCKAP5LQ9HCH0 1330 aa29.15■■■□□ 2.26
CTSD-209ENST00000637158 MYO3AQ8NEV4 1616 aa29.12■■■□□ 2.25
CTSD-209ENST00000637158 ZNF142P52746 1687 aaPredicted RBP29.12■■■□□ 2.25
CTSD-209ENST00000637158 CEP170BQ9Y4F5 1589 aaPredicted RBP29.12■■■□□ 2.25
CTSD-209ENST00000637158 DISP3Q9P2K9 1392 aa29.09■■■□□ 2.25
CTSD-209ENST00000637158 CCDC141Q6ZP82 1450 aa29.09■■■□□ 2.25
CTSD-209ENST00000637158 TCOF1Q13428 1488 aaKnown RBP29.08■■■□□ 2.25
CTSD-209ENST00000637158 KIF3BO15066 747 aa29.07■■■□□ 2.24
CTSD-209ENST00000637158 NCOA2Q15596 1464 aa29.07■■■□□ 2.24
CTSD-209ENST00000637158 FAM135AQ9P2D6 1515 aa29.04■■■□□ 2.24
CTSD-209ENST00000637158 A2ML1A8K2U0 1454 aa29.04■■■□□ 2.24
CTSD-209ENST00000637158 ZNF335Q9H4Z2 1342 aaPredicted RBP29.04■■■□□ 2.24
CTSD-209ENST00000637158 TSPY4P0CV99 314 aa29.04■■■□□ 2.24
Retrieved 100 of 20,778 RNA–protein pairs in 156.9 ms