RNA–Protein interactions for RNA: ENST00000635739.1

SMARCA2-246, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 5

Gene SMARCA2, Length 4,272 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-246ENST00000635739 ANO8Q9HCE9 1232 aaPredicted RBP11.01□□□□□ -0.65
SMARCA2-246ENST00000635739 NAIPQ13075 1403 aa11.01□□□□□ -0.65
SMARCA2-246ENST00000635739 PDE3BQ13370 1112 aa11.01□□□□□ -0.65
SMARCA2-246ENST00000635739 EXOC6Q8TAG9 804 aa11.01□□□□□ -0.65
SMARCA2-246ENST00000635739 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.01□□□□□ -0.65
SMARCA2-246ENST00000635739 ROCK2O75116 1388 aaKnown RBP11.01□□□□□ -0.65
SMARCA2-246ENST00000635739 CANXP27824 592 aaKnown RBP11.01□□□□□ -0.65
SMARCA2-246ENST00000635739 NCOA2Q15596 1464 aa10.99□□□□□ -0.65
SMARCA2-246ENST00000635739 WDR43Q15061 677 aaKnown RBP eCLIP10.99□□□□□ -0.65
SMARCA2-246ENST00000635739 IL27Q8NEV9 243 aa10.98□□□□□ -0.65
SMARCA2-246ENST00000635739 UPF2Q9HAU5 1272 aaKnown RBP10.98□□□□□ -0.65
SMARCA2-246ENST00000635739 CFDP1Q9UEE9 299 aaPredicted RBP10.98□□□□□ -0.65
SMARCA2-246ENST00000635739 PCF11O94913 1555 aaKnown RBP10.98□□□□□ -0.65
SMARCA2-246ENST00000635739 HMGXB3Q12766 1538 aa10.98□□□□□ -0.65
SMARCA2-246ENST00000635739 GLIPR1L2Q4G1C9 344 aa10.98□□□□□ -0.65
SMARCA2-246ENST00000635739 C11orf95C9JLR9 678 aaPredicted RBP10.98□□□□□ -0.65
SMARCA2-246ENST00000635739 GSE1Q14687 1217 aa10.98□□□□□ -0.65
SMARCA2-246ENST00000635739 EFCAB5A4FU69 1503 aa10.97□□□□□ -0.65
SMARCA2-246ENST00000635739 KIF15Q9NS87 1388 aa10.97□□□□□ -0.65
SMARCA2-246ENST00000635739 TSPY4P0CV99 314 aa10.97□□□□□ -0.65
SMARCA2-246ENST00000635739 TSPY10P0CW01 314 aa10.97□□□□□ -0.65
SMARCA2-246ENST00000635739 BECN1Q14457 450 aa10.96□□□□□ -0.65
SMARCA2-246ENST00000635739 DNAJC5BQ9UF47 199 aa10.96□□□□□ -0.65
SMARCA2-246ENST00000635739 MYBBP1AQ9BQG0 1328 aaKnown RBP10.96□□□□□ -0.65
SMARCA2-246ENST00000635739 USP47Q96K76 1375 aa10.96□□□□□ -0.65
SMARCA2-246ENST00000635739 PKD2Q13563 968 aa10.96□□□□□ -0.65
SMARCA2-246ENST00000635739 NBPF8Q3BBV2 869 aa10.96□□□□□ -0.65
SMARCA2-246ENST00000635739 NLRP13Q86W25 1043 aa10.96□□□□□ -0.65
SMARCA2-246ENST00000635739 RGS3P49796 1198 aa10.95□□□□□ -0.66
SMARCA2-246ENST00000635739 ARID4BQ4LE39 1312 aaPredicted RBP10.95□□□□□ -0.66
SMARCA2-246ENST00000635739 NCOA1Q15788 1441 aa10.95□□□□□ -0.66
SMARCA2-246ENST00000635739 KTN1Q86UP2 1357 aaKnown RBP10.95□□□□□ -0.66
SMARCA2-246ENST00000635739 AQRO60306 1485 aaKnown RBP eCLIP10.95□□□□□ -0.66
SMARCA2-246ENST00000635739 PNISRQ8TF01 805 aaKnown RBP10.94□□□□□ -0.66
SMARCA2-246ENST00000635739 DCAF11Q8TEB1 546 aa10.93□□□□□ -0.66
SMARCA2-246ENST00000635739 CC2D2AQ9P2K1 1620 aa10.93□□□□□ -0.66
SMARCA2-246ENST00000635739 BACH2Q9BYV9 841 aa10.93□□□□□ -0.66
SMARCA2-246ENST00000635739 NPM1P06748 294 aaKnown RBP eCLIP10.92□□□□□ -0.66
SMARCA2-246ENST00000635739 CC2D1BQ5T0F9 858 aaKnown RBP10.92□□□□□ -0.66
SMARCA2-246ENST00000635739 TDRD9Q8NDG6 1382 aaKnown RBP10.92□□□□□ -0.66
SMARCA2-246ENST00000635739 PTPN23Q9H3S7 1636 aa10.92□□□□□ -0.66
SMARCA2-246ENST00000635739 ARXQ96QS3 562 aa10.9□□□□□ -0.66
SMARCA2-246ENST00000635739 PTPRKQ15262 1439 aa10.9□□□□□ -0.66
SMARCA2-246ENST00000635739 ST20-MTHFSA0A0A6YYL1 179 aa10.9□□□□□ -0.66
SMARCA2-246ENST00000635739 RGL3Q3MIN7 710 aa10.9□□□□□ -0.66
SMARCA2-246ENST00000635739 BRD4O60885 1362 aaPredicted RBP10.9□□□□□ -0.67
SMARCA2-246ENST00000635739 PLIN1O60240 522 aa10.89□□□□□ -0.67
SMARCA2-246ENST00000635739 SLC4A3P48751 1232 aa10.89□□□□□ -0.67
SMARCA2-246ENST00000635739 NFKBIBQ15653 356 aa10.89□□□□□ -0.67
SMARCA2-246ENST00000635739 RAD54L2Q9Y4B4 1467 aa10.89□□□□□ -0.67
SMARCA2-246ENST00000635739 FANCD2Q9BXW9 1451 aa10.89□□□□□ -0.67
SMARCA2-246ENST00000635739 CRBNQ96SW2 442 aa10.89□□□□□ -0.67
SMARCA2-246ENST00000635739 EHBP1L1Q8N3D4 1523 aa10.88□□□□□ -0.67
SMARCA2-246ENST00000635739 KNSTRNQ9Y448 316 aa10.88□□□□□ -0.67
SMARCA2-246ENST00000635739 FAM161AQ3B820 660 aa10.88□□□□□ -0.67
SMARCA2-246ENST00000635739 CENPQQ7L2Z9 268 aaPredicted RBP10.88□□□□□ -0.67
SMARCA2-246ENST00000635739 L1TD1Q5T7N2 865 aaKnown RBP10.87□□□□□ -0.67
SMARCA2-246ENST00000635739 BRPF3Q9ULD4 1205 aa10.87□□□□□ -0.67
SMARCA2-246ENST00000635739 ERCC6Q03468 1493 aa10.86□□□□□ -0.67
SMARCA2-246ENST00000635739 CFAP43Q8NDM7 1665 aa10.86□□□□□ -0.67
SMARCA2-246ENST00000635739 MIA2Q96PC5 1412 aa10.86□□□□□ -0.67
SMARCA2-246ENST00000635739 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.86□□□□□ -0.674e-7■■■■□ 23.1
SMARCA2-246ENST00000635739 RSPH6AQ9H0K4 717 aa10.86□□□□□ -0.67
SMARCA2-246ENST00000635739 NUP155O75694 1391 aa10.86□□□□□ -0.67
SMARCA2-246ENST00000635739 ANKRD30BQ9BXX2 1392 aa10.85□□□□□ -0.67
SMARCA2-246ENST00000635739 ANKRD30AQ9BXX3 1397 aa10.85□□□□□ -0.67
SMARCA2-246ENST00000635739 SUPT6HQ7KZ85 1726 aaKnown RBP10.85□□□□□ -0.67
SMARCA2-246ENST00000635739 TMF1P82094 1093 aa10.85□□□□□ -0.67
SMARCA2-246ENST00000635739 PLEKHD1A6NEE1 506 aa10.84□□□□□ -0.67
SMARCA2-246ENST00000635739 FRAT1Q92837 279 aaPredicted RBP10.84□□□□□ -0.67
SMARCA2-246ENST00000635739 CDCA8Q53HL2 280 aa10.83□□□□□ -0.68
SMARCA2-246ENST00000635739 RNF123Q5XPI4 1314 aa10.83□□□□□ -0.68
SMARCA2-246ENST00000635739 RPRD2Q5VT52 1461 aaKnown RBP10.83□□□□□ -0.68
SMARCA2-246ENST00000635739 CDCA7LQ96GN5 454 aa10.83□□□□□ -0.68
SMARCA2-246ENST00000635739 NAP1L5Q96NT1 182 aaPredicted RBP10.83□□□□□ -0.68
SMARCA2-246ENST00000635739 GOLGA2Q08379 1002 aa10.82□□□□□ -0.68
SMARCA2-246ENST00000635739 NESP48681 1621 aa10.82□□□□□ -0.68
SMARCA2-246ENST00000635739 ZNF644Q9H582 1327 aaPredicted RBP10.82□□□□□ -0.68
SMARCA2-246ENST00000635739 ANP32BQ92688 251 aaKnown RBP10.81□□□□□ -0.68
SMARCA2-246ENST00000635739 SLKQ9H2G2 1235 aaPredicted RBP10.81□□□□□ -0.68
SMARCA2-246ENST00000635739 HSP90AA1P07900 732 aaKnown RBP10.79□□□□□ -0.68
SMARCA2-246ENST00000635739 GAPVD1Q14C86 1478 aa10.79□□□□□ -0.68
SMARCA2-246ENST00000635739 ROCK1Q13464 1354 aa10.79□□□□□ -0.68
SMARCA2-246ENST00000635739 TRIM44Q96DX7 344 aaPredicted RBP10.79□□□□□ -0.68
SMARCA2-246ENST00000635739 ABCA10Q8WWZ4 1543 aa10.78□□□□□ -0.68
SMARCA2-246ENST00000635739 POLA1P09884 1462 aaPredicted RBP10.78□□□□□ -0.68
SMARCA2-246ENST00000635739 TRHP20396 242 aaPredicted RBP10.78□□□□□ -0.68
SMARCA2-246ENST00000635739 PANK3Q9H999 370 aa10.78□□□□□ -0.68
SMARCA2-246ENST00000635739 FRAT2O75474 233 aaPredicted RBP10.78□□□□□ -0.68
SMARCA2-246ENST00000635739 KIAA1107Q9UPP5 1409 aa10.78□□□□□ -0.68
SMARCA2-246ENST00000635739 PNNQ9H307 717 aaKnown RBP10.77□□□□□ -0.68
SMARCA2-246ENST00000635739 DAPK1P53355 1430 aa10.77□□□□□ -0.69
SMARCA2-246ENST00000635739 WASHC2CQ9Y4E1 1318 aa10.76□□□□□ -0.69
SMARCA2-246ENST00000635739 FAM43AQ8N2R8 423 aa10.76□□□□□ -0.69
SMARCA2-246ENST00000635739 DHX29Q7Z478 1369 aaKnown RBP10.75□□□□□ -0.69
SMARCA2-246ENST00000635739 TOPBP1Q92547 1522 aa10.75□□□□□ -0.69
SMARCA2-246ENST00000635739 CHMP7Q8WUX9 453 aaPredicted RBP10.75□□□□□ -0.69
SMARCA2-246ENST00000635739 GOLGA6L3A6NEY3 463 aa10.75□□□□□ -0.69
SMARCA2-246ENST00000635739 CUL7Q14999 1698 aa10.75□□□□□ -0.69
SMARCA2-246ENST00000635739 MAPK8IP3Q9UPT6 1336 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms