RNA–Protein interactions for RNA: ENST00000635392.1

SMARCA2-240, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 5

Gene SMARCA2, Length 291 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-240ENST00000635392 LMOD2Q6P5Q4 547 aa13.11□□□□□ -0.31
SMARCA2-240ENST00000635392 PDE4AP27815 886 aa13.1□□□□□ -0.31
SMARCA2-240ENST00000635392 LARP6Q9BRS8 491 aaKnown RBP13.1□□□□□ -0.31
SMARCA2-240ENST00000635392 SCUBE2Q9NQ36 999 aa13.1□□□□□ -0.31
SMARCA2-240ENST00000635392 TTLL13PA6NNM8 815 aa13.09□□□□□ -0.31
SMARCA2-240ENST00000635392 GOLGA2Q08379 1002 aa13.08□□□□□ -0.32
SMARCA2-240ENST00000635392 TESPA1A2RU30 521 aaPredicted RBP13.07□□□□□ -0.32
SMARCA2-240ENST00000635392 MKRN3Q13064 507 aaKnown RBP13.07□□□□□ -0.32
SMARCA2-240ENST00000635392 ARIH1Q9Y4X5 557 aaPredicted RBP13.07□□□□□ -0.32
SMARCA2-240ENST00000635392 COLQQ9Y215 455 aaPredicted RBP13.06□□□□□ -0.32
SMARCA2-240ENST00000635392 SEMA3EO15041 775 aa13.05□□□□□ -0.32
SMARCA2-240ENST00000635392 FAM163AQ96GL9 167 aaPredicted RBP13.05□□□□□ -0.32
SMARCA2-240ENST00000635392 CAMK2BQ13554 666 aa13.04□□□□□ -0.32
SMARCA2-240ENST00000635392 DDX27Q96GQ7 796 aaKnown RBP13.01□□□□□ -0.33
SMARCA2-240ENST00000635392 SEC24BO95487 1268 aa12.99□□□□□ -0.33
SMARCA2-240ENST00000635392 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.99□□□□□ -0.33
SMARCA2-240ENST00000635392 PCDH10Q9P2E7 1040 aa12.99□□□□□ -0.33
SMARCA2-240ENST00000635392 TRIM35Q9UPQ4 493 aa12.99□□□□□ -0.33
SMARCA2-240ENST00000635392 DPY19L2Q6NUT2 758 aa12.96□□□□□ -0.33
SMARCA2-240ENST00000635392 ZC3H15Q8WU90 426 aaKnown RBP12.95□□□□□ -0.34
SMARCA2-240ENST00000635392 GPHNQ9NQX3 736 aaPredicted RBP12.95□□□□□ -0.34
SMARCA2-240ENST00000635392 IER5LQ5T953 404 aa12.94□□□□□ -0.34
SMARCA2-240ENST00000635392 TULP1O00294 542 aaPredicted RBP12.93□□□□□ -0.34
SMARCA2-240ENST00000635392 PDCD7Q8N8D1 485 aaKnown RBP12.92□□□□□ -0.34
SMARCA2-240ENST00000635392 PPP1R15BQ5SWA1 713 aa12.89□□□□□ -0.35
SMARCA2-240ENST00000635392 MICALL2Q8IY33 904 aa12.88□□□□□ -0.35
SMARCA2-240ENST00000635392 IRX5P78411 483 aaPredicted RBP12.87□□□□□ -0.35
SMARCA2-240ENST00000635392 TMEM121BQ9BXQ6 578 aaPredicted RBP12.86□□□□□ -0.35
SMARCA2-240ENST00000635392 DSG2Q14126 1118 aa12.85□□□□□ -0.35
SMARCA2-240ENST00000635392 EMILIN3Q9NT22 766 aa12.85□□□□□ -0.35
SMARCA2-240ENST00000635392 ZMYND10O75800 440 aa12.83□□□□□ -0.36
SMARCA2-240ENST00000635392 TMEM132AQ24JP5 1023 aa12.83□□□□□ -0.36
SMARCA2-240ENST00000635392 SMYD5Q6GMV2 418 aa12.83□□□□□ -0.36
SMARCA2-240ENST00000635392 MLLT3P42568 568 aaPredicted RBP12.82□□□□□ -0.36
SMARCA2-240ENST00000635392 BRPF1P55201 1214 aaPredicted RBP12.81□□□□□ -0.36
SMARCA2-240ENST00000635392 SLAIN1Q8ND83 568 aa12.81□□□□□ -0.36
SMARCA2-240ENST00000635392 FOXK1P85037 733 aa12.8□□□□□ -0.36
SMARCA2-240ENST00000635392 OCEL1Q9H607 264 aa12.8□□□□□ -0.36
SMARCA2-240ENST00000635392 KIF3CO14782 793 aa12.79□□□□□ -0.36
SMARCA2-240ENST00000635392 PLCG2P16885 1265 aa12.79□□□□□ -0.36
SMARCA2-240ENST00000635392 SLC24A3Q9HC58 644 aa12.79□□□□□ -0.36
SMARCA2-240ENST00000635392 DPYSL4O14531 572 aa12.77□□□□□ -0.37
SMARCA2-240ENST00000635392 GTF3C3Q9Y5Q9 886 aa12.77□□□□□ -0.37
SMARCA2-240ENST00000635392 BARGINQ6ZT62 677 aa12.76□□□□□ -0.37
SMARCA2-240ENST00000635392 BOLA1Q9Y3E2 137 aa12.76□□□□□ -0.37
SMARCA2-240ENST00000635392 ST18O60284 1047 aa12.75□□□□□ -0.37
SMARCA2-240ENST00000635392 PDIA6Q15084 440 aa12.75□□□□□ -0.37
SMARCA2-240ENST00000635392 RBM26Q5T8P6 1007 aaKnown RBP12.75□□□□□ -0.37
SMARCA2-240ENST00000635392 CDAN1Q8IWY9 1227 aa12.75□□□□□ -0.37
SMARCA2-240ENST00000635392 C2orf72A6NCS6 295 aa12.74□□□□□ -0.37
SMARCA2-240ENST00000635392 TMC2Q8TDI7 906 aa12.74□□□□□ -0.37
SMARCA2-240ENST00000635392 SPDYE16A6NNV3 312 aaPredicted RBP12.73□□□□□ -0.37
SMARCA2-240ENST00000635392 PLPP6Q8IY26 295 aa12.72□□□□□ -0.37
SMARCA2-240ENST00000635392 TMEM92Q6UXU6 159 aa12.69□□□□□ -0.38
SMARCA2-240ENST00000635392 TIMELESSQ9UNS1 1208 aa12.67□□□□□ -0.38
SMARCA2-240ENST00000635392 NEUROD2Q15784 382 aa12.64□□□□□ -0.39
SMARCA2-240ENST00000635392 GPIHBP1Q8IV16 184 aa12.64□□□□□ -0.39
SMARCA2-240ENST00000635392 L3MBTL3Q96JM7 780 aaPredicted RBP12.63□□□□□ -0.39
SMARCA2-240ENST00000635392 GPR37O15354 613 aa12.62□□□□□ -0.39
SMARCA2-240ENST00000635392 OXER1Q8TDS5 423 aa12.6□□□□□ -0.39
SMARCA2-240ENST00000635392 AK7Q96M32 723 aa12.6□□□□□ -0.39
SMARCA2-240ENST00000635392 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.59□□□□□ -0.39
SMARCA2-240ENST00000635392 G3V3G9 751 aa12.58□□□□□ -0.4
SMARCA2-240ENST00000635392 MAP3K9P80192 1104 aa12.57□□□□□ -0.4
SMARCA2-240ENST00000635392 PTGER2P43116 358 aa12.55□□□□□ -0.4
SMARCA2-240ENST00000635392 OSBPP22059 807 aa12.54□□□□□ -0.4
SMARCA2-240ENST00000635392 UPF1Q92900 1129 aaKnown RBP eCLIP12.53□□□□□ -0.4
SMARCA2-240ENST00000635392 GRXCR2A6NFK2 248 aa12.52□□□□□ -0.41
SMARCA2-240ENST00000635392 TRIM66O15016 1216 aa12.52□□□□□ -0.41
SMARCA2-240ENST00000635392 SNPHO15079 494 aa12.52□□□□□ -0.41
SMARCA2-240ENST00000635392 KRI1Q8N9T8 703 aaKnown RBP12.52□□□□□ -0.41
SMARCA2-240ENST00000635392 MARVELD3Q96A59 401 aa12.52□□□□□ -0.41
SMARCA2-240ENST00000635392 GPBP1L1Q9HC44 474 aaPredicted RBP12.5□□□□□ -0.41
SMARCA2-240ENST00000635392 PRIM1P49642 420 aaKnown RBP12.49□□□□□ -0.41
SMARCA2-240ENST00000635392 PTCD2Q8WV60 388 aaKnown RBP12.47□□□□□ -0.41
SMARCA2-240ENST00000635392 C3orf67Q6ZVT6 689 aa12.46□□□□□ -0.41
SMARCA2-240ENST00000635392 ERICH6Q7L0X2 663 aa12.46□□□□□ -0.41
SMARCA2-240ENST00000635392 PDE4DQ08499 809 aa12.45□□□□□ -0.42
SMARCA2-240ENST00000635392 SPNS2Q8IVW8 549 aa12.45□□□□□ -0.42
SMARCA2-240ENST00000635392 DDX12PQ92771 950 aa12.45□□□□□ -0.42
SMARCA2-240ENST00000635392 EVI5O60447 810 aa12.44□□□□□ -0.42
SMARCA2-240ENST00000635392 SLC34A2O95436 690 aa12.44□□□□□ -0.42
SMARCA2-240ENST00000635392 MMRN1Q13201 1228 aa12.44□□□□□ -0.42
SMARCA2-240ENST00000635392 ANO8Q9HCE9 1232 aaPredicted RBP12.44□□□□□ -0.42
SMARCA2-240ENST00000635392 MINK1Q8N4C8 1332 aaPredicted RBP12.43□□□□□ -0.42
SMARCA2-240ENST00000635392 NUTM2FA1L443 756 aa12.43□□□□□ -0.42
SMARCA2-240ENST00000635392 KDM4CQ9H3R0 1056 aa12.43□□□□□ -0.42
SMARCA2-240ENST00000635392 TBC1D12O60347 775 aa12.42□□□□□ -0.42
SMARCA2-240ENST00000635392 IRF6O14896 467 aa12.41□□□□□ -0.42
SMARCA2-240ENST00000635392 MAP2K5Q13163 448 aa12.41□□□□□ -0.42
SMARCA2-240ENST00000635392 GNPATO15228 680 aa12.4□□□□□ -0.42
SMARCA2-240ENST00000635392 FECHP22830 423 aa12.39□□□□□ -0.43
SMARCA2-240ENST00000635392 EMP3P54852 163 aa12.38□□□□□ -0.43
SMARCA2-240ENST00000635392 HIC1Q14526 733 aa12.38□□□□□ -0.43
SMARCA2-240ENST00000635392 FCHSD2O94868 740 aa12.37□□□□□ -0.43
SMARCA2-240ENST00000635392 CCDC102AQ96A19 550 aa12.37□□□□□ -0.43
SMARCA2-240ENST00000635392 POTEB3A0JP26 581 aa12.36□□□□□ -0.43
SMARCA2-240ENST00000635392 PTGDRQ13258 359 aa12.36□□□□□ -0.43
SMARCA2-240ENST00000635392 POTEBQ6S5H4 581 aa12.36□□□□□ -0.43
SMARCA2-240ENST00000635392 IL27Q8NEV9 243 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms