RNA–Protein interactions for RNA: ENST00000630255.2

DDX3X-219, Transcript of DEAD-box helicase 3 X-linked, humanhuman

TSL 5

Gene DDX3X, Length 3,289 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX3X-219ENST00000630255 GAPVD1Q14C86 1478 aa13.72□□□□□ -0.21
DDX3X-219ENST00000630255 HSPA5P11021 654 aaKnown RBP13.7□□□□□ -0.22
DDX3X-219ENST00000630255 SPATA31E1Q6ZUB1 1445 aa13.7□□□□□ -0.22
DDX3X-219ENST00000630255 RPRD2Q5VT52 1461 aaKnown RBP13.7□□□□□ -0.22
DDX3X-219ENST00000630255 ATP1B4Q9UN42 357 aaPredicted RBP13.7□□□□□ -0.22
DDX3X-219ENST00000630255 EPRSP07814 1512 aaKnown RBP13.7□□□□□ -0.22
DDX3X-219ENST00000630255 HNRNPUQ00839 825 aaKnown RBP eCLIP13.7□□□□□ -0.22
DDX3X-219ENST00000630255 IQGAP2Q13576 1575 aa13.68□□□□□ -0.22
DDX3X-219ENST00000630255 ADGBQ8N7X0 1667 aa13.68□□□□□ -0.22
DDX3X-219ENST00000630255 CCDC7Q96M83 1385 aa13.68□□□□□ -0.22
DDX3X-219ENST00000630255 ADAMTS12P58397 1594 aa13.67□□□□□ -0.22
DDX3X-219ENST00000630255 SLC4A1APQ9BWU0 796 aaKnown RBP13.67□□□□□ -0.22
DDX3X-219ENST00000630255 CROCC2H7BZ55 1655 aa13.67□□□□□ -0.22
DDX3X-219ENST00000630255 MBD5Q9P267 1494 aa13.67□□□□□ -0.22
DDX3X-219ENST00000630255 BCORL1Q5H9F3 1711 aa13.66□□□□□ -0.22
DDX3X-219ENST00000630255 ZBED9Q6R2W3 1325 aa13.65□□□□□ -0.22
DDX3X-219ENST00000630255 ROCK1Q13464 1354 aa13.65□□□□□ -0.22
DDX3X-219ENST00000630255 CCDC184Q52MB2 194 aa13.65□□□□□ -0.22
DDX3X-219ENST00000630255 KIF14Q15058 1648 aa13.65□□□□□ -0.22
DDX3X-219ENST00000630255 CDK13Q14004 1512 aaKnown RBP13.64□□□□□ -0.23
DDX3X-219ENST00000630255 PPP4R2Q9NY27 417 aa13.64□□□□□ -0.23
DDX3X-219ENST00000630255 CDK11AQ9UQ88 783 aaPredicted RBP13.64□□□□□ -0.23
DDX3X-219ENST00000630255 ANKRD30BQ9BXX2 1392 aa13.63□□□□□ -0.23
DDX3X-219ENST00000630255 PRKRIP1Q9H875 184 aaPredicted RBP13.63□□□□□ -0.23
DDX3X-219ENST00000630255 C11orf95C9JLR9 678 aaPredicted RBP13.63□□□□□ -0.23
DDX3X-219ENST00000630255 EIF4G2P78344 907 aaKnown RBP eCLIP13.63□□□□□ -0.23
DDX3X-219ENST00000630255 DAPK1P53355 1430 aa13.62□□□□□ -0.23
DDX3X-219ENST00000630255 KDM5CP41229 1560 aa13.62□□□□□ -0.23
DDX3X-219ENST00000630255 E9PCH4 1651 aa13.61□□□□□ -0.23
DDX3X-219ENST00000630255 IRX6P78412 446 aaPredicted RBP13.6□□□□□ -0.23
DDX3X-219ENST00000630255 TDRD9Q8NDG6 1382 aaKnown RBP13.6□□□□□ -0.23
DDX3X-219ENST00000630255 ADCY10Q96PN6 1610 aa13.6□□□□□ -0.23
DDX3X-219ENST00000630255 MPHOSPH9Q99550 1183 aa13.59□□□□□ -0.23
DDX3X-219ENST00000630255 ITSN2Q9NZM3 1697 aa13.59□□□□□ -0.23
DDX3X-219ENST00000630255 SMG6Q86US8 1419 aaKnown RBP13.59□□□□□ -0.23
DDX3X-219ENST00000630255 KIAA0556O60303 1618 aa13.58□□□□□ -0.24
DDX3X-219ENST00000630255 L3MBTL2Q969R5 705 aa13.58□□□□□ -0.24
DDX3X-219ENST00000630255 RRP7BPQ9NSQ0 103 aa13.58□□□□□ -0.24
DDX3X-219ENST00000630255 PZPP20742 1482 aa13.58□□□□□ -0.24
DDX3X-219ENST00000630255 DHX29Q7Z478 1369 aaKnown RBP13.57□□□□□ -0.24
DDX3X-219ENST00000630255 ABCC5O15440 1437 aa13.57□□□□□ -0.24
DDX3X-219ENST00000630255 RNF123Q5XPI4 1314 aa13.57□□□□□ -0.24
DDX3X-219ENST00000630255 RAPGEF6Q8TEU7 1601 aa13.56□□□□□ -0.24
DDX3X-219ENST00000630255 NBPF8Q3BBV2 869 aa13.56□□□□□ -0.24
DDX3X-219ENST00000630255 KIF7Q2M1P5 1343 aa13.55□□□□□ -0.24
DDX3X-219ENST00000630255 ADGRL2O95490 1459 aa13.53□□□□□ -0.24
DDX3X-219ENST00000630255 MYT1LQ9UL68 1186 aa13.53□□□□□ -0.24
DDX3X-219ENST00000630255 DISP1Q96F81 1524 aa13.52□□□□□ -0.25
DDX3X-219ENST00000630255 CHIC2Q9UKJ5 165 aa13.52□□□□□ -0.25
DDX3X-219ENST00000630255 NUP153P49790 1475 aaKnown RBP13.51□□□□□ -0.25
DDX3X-219ENST00000630255 PDS5BQ9NTI5 1447 aa13.51□□□□□ -0.25
DDX3X-219ENST00000630255 MRS2Q9HD23 443 aa13.5□□□□□ -0.25
DDX3X-219ENST00000630255 CDC42BPAQ5VT25 1732 aa13.5□□□□□ -0.25
DDX3X-219ENST00000630255 B4GALNT3Q6L9W6 998 aa13.49□□□□□ -0.25
DDX3X-219ENST00000630255 CAMSAP2Q08AD1 1489 aa13.48□□□□□ -0.25
DDX3X-219ENST00000630255 UHRF1BP1Q6BDS2 1440 aa13.48□□□□□ -0.25
DDX3X-219ENST00000630255 KDM5DQ9BY66 1539 aa13.48□□□□□ -0.25
DDX3X-219ENST00000630255 PPP4R3CPQ6ZMV5 832 aa13.48□□□□□ -0.25
DDX3X-219ENST00000630255 RALGAPBQ86X10 1494 aa13.47□□□□□ -0.25
DDX3X-219ENST00000630255 FAM9BQ8IZU0 186 aa13.47□□□□□ -0.25
DDX3X-219ENST00000630255 ARHGEF12Q9NZN5 1544 aa13.47□□□□□ -0.25
DDX3X-219ENST00000630255 ARID4BQ4LE39 1312 aaPredicted RBP13.46□□□□□ -0.25
DDX3X-219ENST00000630255 ANO8Q9HCE9 1232 aaPredicted RBP13.45□□□□□ -0.26
DDX3X-219ENST00000630255 CEP170Q5SW79 1584 aa13.45□□□□□ -0.26
DDX3X-219ENST00000630255 KIAA1107Q9UPP5 1409 aa13.45□□□□□ -0.26
DDX3X-219ENST00000630255 NUDCQ9Y266 331 aa13.44□□□□□ -0.26
DDX3X-219ENST00000630255 LRPPRCP42704 1394 aaKnown RBP13.43□□□□□ -0.26
DDX3X-219ENST00000630255 KIAA0586Q9BVV6 1533 aa13.43□□□□□ -0.26
DDX3X-219ENST00000630255 USP47Q96K76 1375 aa13.42□□□□□ -0.26
DDX3X-219ENST00000630255 NOP58Q9Y2X3 529 aaKnown RBP13.42□□□□□ -0.26
DDX3X-219ENST00000630255 SHANK2Q9UPX8 1470 aa13.41□□□□□ -0.26
DDX3X-219ENST00000630255 TRPM1Q7Z4N2 1603 aa13.4□□□□□ -0.26
DDX3X-219ENST00000630255 GPATCH8Q9UKJ3 1502 aaKnown RBP13.4□□□□□ -0.26
DDX3X-219ENST00000630255 ROCK2O75116 1388 aaKnown RBP13.4□□□□□ -0.26
DDX3X-219ENST00000630255 TROQ12816 1431 aaPredicted RBP13.39□□□□□ -0.27
DDX3X-219ENST00000630255 LAMC1P11047 1609 aa13.39□□□□□ -0.27
DDX3X-219ENST00000630255 ZNF644Q9H582 1327 aaPredicted RBP13.38□□□□□ -0.27
DDX3X-219ENST00000630255 PAK3O75914 559 aaPredicted RBP13.38□□□□□ -0.27
DDX3X-219ENST00000630255 DEKP35659 375 aaKnown RBP13.38□□□□□ -0.27
DDX3X-219ENST00000630255 MRC2Q9UBG0 1479 aa13.37□□□□□ -0.27
DDX3X-219ENST00000630255 PNISRQ8TF01 805 aaKnown RBP13.37□□□□□ -0.27
DDX3X-219ENST00000630255 PODXL2Q9NZ53 605 aa13.37□□□□□ -0.27
DDX3X-219ENST00000630255 KTN1Q86UP2 1357 aaKnown RBP13.37□□□□□ -0.27
DDX3X-219ENST00000630255 EIF4G3O43432 1585 aaKnown RBP13.37□□□□□ -0.27
DDX3X-219ENST00000630255 ZMYM4Q5VZL5 1548 aa13.36□□□□□ -0.27
DDX3X-219ENST00000630255 PTPRGP23470 1445 aa13.36□□□□□ -0.27
DDX3X-219ENST00000630255 GRIN2AQ12879 1464 aa13.35□□□□□ -0.27
DDX3X-219ENST00000630255 NCBP3Q53F19 620 aaKnown RBP13.35□□□□□ -0.27
DDX3X-219ENST00000630255 MYO5CQ9NQX4 1742 aa13.35□□□□□ -0.27
DDX3X-219ENST00000630255 PRG4Q92954 1404 aaPredicted RBP13.34□□□□□ -0.27
DDX3X-219ENST00000630255 IFT140Q96RY7 1462 aa13.34□□□□□ -0.27
DDX3X-219ENST00000630255 BRD4O60885 1362 aaPredicted RBP13.34□□□□□ -0.27
DDX3X-219ENST00000630255 ARHGEF5Q12774 1597 aa13.33□□□□□ -0.27
DDX3X-219ENST00000630255 KIF15Q9NS87 1388 aa13.33□□□□□ -0.28
DDX3X-219ENST00000630255 IPO9Q96P70 1041 aaKnown RBP13.33□□□□□ -0.28
DDX3X-219ENST00000630255 ABCC10Q5T3U5 1492 aa13.33□□□□□ -0.28
DDX3X-219ENST00000630255 ABCA8O94911 1581 aa13.32□□□□□ -0.28
DDX3X-219ENST00000630255 ZNF608Q9ULD9 1512 aaPredicted RBP13.32□□□□□ -0.28
DDX3X-219ENST00000630255 ANKRD50Q9ULJ7 1429 aa13.3□□□□□ -0.28
DDX3X-219ENST00000630255 CCDC136Q96JN2 1154 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms