RNA–Protein interactions for RNA: ENST00000628696.2

SMN2-215, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 885 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-215ENST00000628696 POGZQ7Z3K3 1410 aa31.22■■■□□ 2.59
SMN2-215ENST00000628696 MLECQ14165 292 aa31.2■■■□□ 2.59
SMN2-215ENST00000628696 EFCAB2Q5VUJ9 269 aa31.2■■■□□ 2.59
SMN2-215ENST00000628696 MYO5CQ9NQX4 1742 aa31.2■■■□□ 2.58
SMN2-215ENST00000628696 MAGI2Q86UL8 1455 aa31.2■■■□□ 2.58
SMN2-215ENST00000628696 PCF11O94913 1555 aaKnown RBP31.17■■■□□ 2.58
SMN2-215ENST00000628696 SIGLEC1Q9BZZ2 1709 aa31.16■■■□□ 2.58
SMN2-215ENST00000628696 KIF14Q15058 1648 aa31.16■■■□□ 2.58
SMN2-215ENST00000628696 TROQ12816 1431 aaPredicted RBP31.13■■■□□ 2.57
SMN2-215ENST00000628696 LMTK3Q96Q04 1460 aa31.12■■■□□ 2.57
SMN2-215ENST00000628696 LRRIQ1Q96JM4 1722 aa31.1■■■□□ 2.57
SMN2-215ENST00000628696 CLIP1P30622 1438 aa31.1■■■□□ 2.57
SMN2-215ENST00000628696 ARHGAP5Q13017 1502 aa31.08■■■□□ 2.57
SMN2-215ENST00000628696 ATP10AO60312 1499 aa31.08■■■□□ 2.57
SMN2-215ENST00000628696 MYT1LQ9UL68 1186 aa31.06■■■□□ 2.56
SMN2-215ENST00000628696 FER1L4A9Z1Z3 1794 aa31.06■■■□□ 2.56
SMN2-215ENST00000628696 HSPA2P54652 639 aa31.05■■■□□ 2.56
SMN2-215ENST00000628696 AFAP1Q8N556 730 aa31.03■■■□□ 2.56
SMN2-215ENST00000628696 FBXO41Q8TF61 875 aa31.03■■■□□ 2.56
SMN2-215ENST00000628696 C9orf84Q5VXU9 1444 aa31.02■■■□□ 2.56
SMN2-215ENST00000628696 ZNF518AQ6AHZ1 1483 aa31■■■□□ 2.55
SMN2-215ENST00000628696 CASKIN1Q8WXD9 1431 aa30.97■■■□□ 2.55
SMN2-215ENST00000628696 CDC42BPBQ9Y5S2 1711 aa30.96■■■□□ 2.55
SMN2-215ENST00000628696 ARHGEF12Q9NZN5 1544 aa30.94■■■□□ 2.54
SMN2-215ENST00000628696 CCDC18Q5T9S5 1454 aa30.94■■■□□ 2.54
SMN2-215ENST00000628696 KDM5CP41229 1560 aa30.92■■■□□ 2.54
SMN2-215ENST00000628696 CEBPAP49715 358 aaPredicted RBP30.9■■■□□ 2.54
SMN2-215ENST00000628696 PREX2Q70Z35 1606 aa30.88■■■□□ 2.53
SMN2-215ENST00000628696 DIP2CQ9Y2E4 1556 aa30.86■■■□□ 2.53
SMN2-215ENST00000628696 TRAPPC8Q9Y2L5 1435 aa30.84■■■□□ 2.53
SMN2-215ENST00000628696 ABCC1P33527 1531 aa30.83■■■□□ 2.53
SMN2-215ENST00000628696 MLH3Q9UHC1 1453 aa30.82■■■□□ 2.53
SMN2-215ENST00000628696 ABCA6Q8N139 1617 aa30.82■■■□□ 2.52
SMN2-215ENST00000628696 FYCO1Q9BQS8 1478 aa30.82■■■□□ 2.52
SMN2-215ENST00000628696 CDC42BPAQ5VT25 1732 aa30.81■■■□□ 2.52
SMN2-215ENST00000628696 ITSN2Q9NZM3 1697 aa30.81■■■□□ 2.52
SMN2-215ENST00000628696 PREX1Q8TCU6 1659 aa30.81■■■□□ 2.52
SMN2-215ENST00000628696 ZNF777Q9ULD5 760 aaPredicted RBP30.8■■■□□ 2.52
SMN2-215ENST00000628696 REREQ9P2R6 1566 aa30.77■■■□□ 2.52
SMN2-215ENST00000628696 ESF1Q9H501 851 aaKnown RBP30.76■■■□□ 2.51
SMN2-215ENST00000628696 SETD1BQ9UPS6 1966 aaKnown RBP30.74■■■□□ 2.51
SMN2-215ENST00000628696 KIDINS220Q9ULH0 1771 aa30.72■■■□□ 2.51
SMN2-215ENST00000628696 AGLP35573 1532 aa30.69■■■□□ 2.5
SMN2-215ENST00000628696 CERKQ8TCT0 537 aa30.69■■■□□ 2.5
SMN2-215ENST00000628696 UHRF1BP1Q6BDS2 1440 aa30.69■■■□□ 2.5
SMN2-215ENST00000628696 HNRNPMP52272 730 aaKnown RBP eCLIP30.68■■■□□ 2.5
SMN2-215ENST00000628696 C3P01024 1663 aa30.68■■■□□ 2.5
SMN2-215ENST00000628696 GPATCH8Q9UKJ3 1502 aaKnown RBP30.68■■■□□ 2.5
SMN2-215ENST00000628696 SAMD9LQ8IVG5 1584 aa30.67■■■□□ 2.5
SMN2-215ENST00000628696 SYCP2Q9BX26 1530 aa30.64■■■□□ 2.5
SMN2-215ENST00000628696 CFDP1Q9UEE9 299 aaPredicted RBP30.64■■■□□ 2.5
SMN2-215ENST00000628696 SPAG9O60271 1321 aaKnown RBP30.64■■■□□ 2.5
SMN2-215ENST00000628696 DMRT2Q9Y5R5 561 aa30.62■■■□□ 2.49
SMN2-215ENST00000628696 STRCQ7RTU9 1775 aa30.61■■■□□ 2.49
SMN2-215ENST00000628696 CCNB3Q8WWL7 1395 aa30.61■■■□□ 2.49
SMN2-215ENST00000628696 MTUS2Q5JR59 1369 aa30.6■■■□□ 2.49
SMN2-215ENST00000628696 CNTLNQ9NXG0 1405 aa30.56■■■□□ 2.48
SMN2-215ENST00000628696 SUPT6HQ7KZ85 1726 aaKnown RBP30.56■■■□□ 2.48
SMN2-215ENST00000628696 PLEKHH2Q8IVE3 1493 aa30.55■■■□□ 2.48
SMN2-215ENST00000628696 KIAA1107Q9UPP5 1409 aa30.54■■■□□ 2.48
SMN2-215ENST00000628696 ATP7AQ04656 1500 aa30.52■■■□□ 2.48
SMN2-215ENST00000628696 ZMYM3Q14202 1370 aa30.47■■■□□ 2.47
SMN2-215ENST00000628696 ZNF644Q9H582 1327 aaPredicted RBP30.47■■■□□ 2.47
SMN2-215ENST00000628696 INO80Q9ULG1 1556 aaPredicted RBP30.46■■■□□ 2.47
SMN2-215ENST00000628696 A2MP01023 1474 aa30.46■■■□□ 2.47
SMN2-215ENST00000628696 MROH2AA6NES4 1674 aa30.46■■■□□ 2.47
SMN2-215ENST00000628696 GGT6Q6P531 493 aa30.44■■■□□ 2.46
SMN2-215ENST00000628696 PTPRTO14522 1441 aa30.43■■■□□ 2.46
SMN2-215ENST00000628696 TIAM1Q13009 1591 aa30.43■■■□□ 2.46
SMN2-215ENST00000628696 CLTCQ00610 1675 aaKnown RBP30.42■■■□□ 2.46
SMN2-215ENST00000628696 EHBP1L1Q8N3D4 1523 aa30.42■■■□□ 2.46
SMN2-215ENST00000628696 NPATQ14207 1427 aa30.41■■■□□ 2.46
SMN2-215ENST00000628696 PLXNC1O60486 1568 aa30.41■■■□□ 2.46
SMN2-215ENST00000628696 CEP162Q5TB80 1403 aa30.4■■■□□ 2.46
SMN2-215ENST00000628696 ADGBQ8N7X0 1667 aa30.37■■■□□ 2.45
SMN2-215ENST00000628696 NCOA1Q15788 1441 aa30.37■■■□□ 2.45
SMN2-215ENST00000628696 CAMSAP1Q5T5Y3 1602 aa30.35■■■□□ 2.45
SMN2-215ENST00000628696 MBD5Q9P267 1494 aa30.34■■■□□ 2.45
SMN2-215ENST00000628696 NCKAP5LQ9HCH0 1330 aa30.3■■■□□ 2.44
SMN2-215ENST00000628696 PPP6R1Q9UPN7 881 aa30.29■■■□□ 2.44
SMN2-215ENST00000628696 PTPRKQ15262 1439 aa30.29■■■□□ 2.44
SMN2-215ENST00000628696 RTEL1-TNFRSF6BF6WH68 1400 aa30.27■■■□□ 2.44
SMN2-215ENST00000628696 NCOA2Q15596 1464 aa30.26■■■□□ 2.44
SMN2-215ENST00000628696 MYO3AQ8NEV4 1616 aa30.26■■■□□ 2.44
SMN2-215ENST00000628696 LTBP4Q8N2S1 1624 aa30.25■■■□□ 2.43
SMN2-215ENST00000628696 DHX29Q7Z478 1369 aaKnown RBP30.25■■■□□ 2.43
SMN2-215ENST00000628696 KIF3BO15066 747 aa30.22■■■□□ 2.43
SMN2-215ENST00000628696 CEP170BQ9Y4F5 1589 aaPredicted RBP30.22■■■□□ 2.43
SMN2-215ENST00000628696 ZNF142P52746 1687 aaPredicted RBP30.22■■■□□ 2.43
SMN2-215ENST00000628696 CAMSAP2Q08AD1 1489 aa30.21■■■□□ 2.43
SMN2-215ENST00000628696 CCDC141Q6ZP82 1450 aa30.21■■■□□ 2.43
SMN2-215ENST00000628696 PKD2Q13563 968 aa30.19■■■□□ 2.42
SMN2-215ENST00000628696 RSPH4AQ5TD94 716 aa30.19■■■□□ 2.42
SMN2-215ENST00000628696 LOC105371045A0A1W2PR82 267 aa30.17■■■□□ 2.42
SMN2-215ENST00000628696 PLA2R1Q13018 1463 aa30.16■■■□□ 2.42
SMN2-215ENST00000628696 ZNF335Q9H4Z2 1342 aaPredicted RBP30.15■■■□□ 2.42
SMN2-215ENST00000628696 TSPY4P0CV99 314 aa30.13■■■□□ 2.41
SMN2-215ENST00000628696 TSPY10P0CW01 314 aa30.13■■■□□ 2.41
SMN2-215ENST00000628696 IQSEC2Q5JU85 1478 aa30.12■■■□□ 2.41
SMN2-215ENST00000628696 FBXO31Q5XUX0 539 aaPredicted RBP30.12■■■□□ 2.41
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms