RNA–Protein interactions for RNA: ENST00000627809.1

SPTAN1-213, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 3

Gene SPTAN1, Length 342 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-213ENST00000627809 BCORL1Q5H9F3 1711 aa13.17□□□□□ -0.3
SPTAN1-213ENST00000627809 PLCH2O75038 1416 aa13.17□□□□□ -0.3
SPTAN1-213ENST00000627809 ADAMTSL3P82987 1691 aa13.17□□□□□ -0.3
SPTAN1-213ENST00000627809 ZMYM4Q5VZL5 1548 aa13.17□□□□□ -0.3
SPTAN1-213ENST00000627809 MADDQ8WXG6 1647 aa13.16□□□□□ -0.3
SPTAN1-213ENST00000627809 CCDC18Q5T9S5 1454 aa13.16□□□□□ -0.3
SPTAN1-213ENST00000627809 TIAM1Q13009 1591 aa13.15□□□□□ -0.3
SPTAN1-213ENST00000627809 ABCC1P33527 1531 aa13.15□□□□□ -0.3
SPTAN1-213ENST00000627809 ARHGAP5Q13017 1502 aa13.15□□□□□ -0.3
SPTAN1-213ENST00000627809 ABCA6Q8N139 1617 aa13.15□□□□□ -0.3
SPTAN1-213ENST00000627809 POGZQ7Z3K3 1410 aa13.14□□□□□ -0.31
SPTAN1-213ENST00000627809 DENND4BO75064 1496 aaPredicted RBP13.14□□□□□ -0.31
SPTAN1-213ENST00000627809 AEBP2Q6ZN18 517 aaPredicted RBP13.13□□□□□ -0.31
SPTAN1-213ENST00000627809 SCAPERQ9BY12 1400 aa13.13□□□□□ -0.31
SPTAN1-213ENST00000627809 RIMS1Q86UR5 1692 aaKnown RBP13.12□□□□□ -0.31
SPTAN1-213ENST00000627809 KDM5CP41229 1560 aa13.12□□□□□ -0.31
SPTAN1-213ENST00000627809 TRAPPC8Q9Y2L5 1435 aa13.12□□□□□ -0.31
SPTAN1-213ENST00000627809 KIDINS220Q9ULH0 1771 aa13.12□□□□□ -0.31
SPTAN1-213ENST00000627809 DIP2CQ9Y2E4 1556 aa13.11□□□□□ -0.31
SPTAN1-213ENST00000627809 ZFYVE16Q7Z3T8 1539 aa13.11□□□□□ -0.31
SPTAN1-213ENST00000627809 SYCP2Q9BX26 1530 aa13.11□□□□□ -0.31
SPTAN1-213ENST00000627809 GPATCH8Q9UKJ3 1502 aaKnown RBP13.11□□□□□ -0.31
SPTAN1-213ENST00000627809 HECW2Q9P2P5 1572 aa13.08□□□□□ -0.32
SPTAN1-213ENST00000627809 AFAP1Q8N556 730 aa13.08□□□□□ -0.32
SPTAN1-213ENST00000627809 EHBP1L1Q8N3D4 1523 aa13.08□□□□□ -0.32
SPTAN1-213ENST00000627809 ZNF644Q9H582 1327 aaPredicted RBP13.07□□□□□ -0.32
SPTAN1-213ENST00000627809 FER1L4A9Z1Z3 1794 aa13.07□□□□□ -0.32
SPTAN1-213ENST00000627809 VPS8Q8N3P4 1428 aa13.06□□□□□ -0.32
SPTAN1-213ENST00000627809 PHLDB1Q86UU1 1377 aa13.05□□□□□ -0.32
SPTAN1-213ENST00000627809 INO80Q9ULG1 1556 aaPredicted RBP13.04□□□□□ -0.32
SPTAN1-213ENST00000627809 KANK4Q5T7N3 995 aaPredicted RBP13.04□□□□□ -0.32
SPTAN1-213ENST00000627809 SUPT6HQ7KZ85 1726 aaKnown RBP13.04□□□□□ -0.32
SPTAN1-213ENST00000627809 NCOA2Q15596 1464 aa13.03□□□□□ -0.32
SPTAN1-213ENST00000627809 ADGBQ8N7X0 1667 aa13.02□□□□□ -0.32
SPTAN1-213ENST00000627809 PTPRMP28827 1452 aa13.02□□□□□ -0.33
SPTAN1-213ENST00000627809 EFCAB2Q5VUJ9 269 aa13.01□□□□□ -0.33
SPTAN1-213ENST00000627809 MTUS2Q5JR59 1369 aa13.01□□□□□ -0.33
SPTAN1-213ENST00000627809 ZNF518AQ6AHZ1 1483 aa13.01□□□□□ -0.33
SPTAN1-213ENST00000627809 LRRC9Q6ZRR7 1453 aa13□□□□□ -0.33
SPTAN1-213ENST00000627809 ZNF777Q9ULD5 760 aaPredicted RBP13□□□□□ -0.33
SPTAN1-213ENST00000627809 CDK11AQ9UQ88 783 aaPredicted RBP13□□□□□ -0.33
SPTAN1-213ENST00000627809 HNRNPMP52272 730 aaKnown RBP eCLIP12.99□□□□□ -0.33
SPTAN1-213ENST00000627809 MBD5Q9P267 1494 aa12.98□□□□□ -0.33
SPTAN1-213ENST00000627809 MLECQ14165 292 aa12.98□□□□□ -0.33
SPTAN1-213ENST00000627809 ATP10AO60312 1499 aa12.97□□□□□ -0.33
SPTAN1-213ENST00000627809 ATP7AQ04656 1500 aa12.97□□□□□ -0.33
SPTAN1-213ENST00000627809 CAMSAP2Q08AD1 1489 aa12.97□□□□□ -0.33
SPTAN1-213ENST00000627809 MAGI2Q86UL8 1455 aa12.97□□□□□ -0.33
SPTAN1-213ENST00000627809 MLH3Q9UHC1 1453 aa12.97□□□□□ -0.33
SPTAN1-213ENST00000627809 C9orf84Q5VXU9 1444 aa12.96□□□□□ -0.33
SPTAN1-213ENST00000627809 CCNB3Q8WWL7 1395 aa12.96□□□□□ -0.33
SPTAN1-213ENST00000627809 C3P01024 1663 aa12.96□□□□□ -0.33
SPTAN1-213ENST00000627809 PLXNC1O60486 1568 aa12.96□□□□□ -0.33
SPTAN1-213ENST00000627809 PLPPR3Q6T4P5 718 aa12.96□□□□□ -0.33
SPTAN1-213ENST00000627809 REREQ9P2R6 1566 aa12.95□□□□□ -0.34
SPTAN1-213ENST00000627809 ARID4BQ4LE39 1312 aaPredicted RBP12.95□□□□□ -0.34
SPTAN1-213ENST00000627809 LMTK3Q96Q04 1460 aa12.92□□□□□ -0.34
SPTAN1-213ENST00000627809 CFDP1Q9UEE9 299 aaPredicted RBP12.92□□□□□ -0.34
SPTAN1-213ENST00000627809 CLTCQ00610 1675 aaKnown RBP12.92□□□□□ -0.34
SPTAN1-213ENST00000627809 CEBPAP49715 358 aaPredicted RBP12.91□□□□□ -0.34
SPTAN1-213ENST00000627809 CROCC2H7BZ55 1655 aa12.91□□□□□ -0.34
SPTAN1-213ENST00000627809 MAP3K1Q13233 1512 aa12.91□□□□□ -0.34
SPTAN1-213ENST00000627809 KIAA1107Q9UPP5 1409 aa12.89□□□□□ -0.35
SPTAN1-213ENST00000627809 AGLP35573 1532 aa12.88□□□□□ -0.35
SPTAN1-213ENST00000627809 PTPN23Q9H3S7 1636 aa12.88□□□□□ -0.35
SPTAN1-213ENST00000627809 ARHGEF5Q12774 1597 aa12.87□□□□□ -0.35
SPTAN1-213ENST00000627809 STRCQ7RTU9 1775 aa12.86□□□□□ -0.35
SPTAN1-213ENST00000627809 MYOM3Q5VTT5 1437 aa12.86□□□□□ -0.35
SPTAN1-213ENST00000627809 PREX1Q8TCU6 1659 aa12.86□□□□□ -0.35
SPTAN1-213ENST00000627809 CCDC141Q6ZP82 1450 aa12.85□□□□□ -0.35
SPTAN1-213ENST00000627809 MROH1Q8NDA8 1641 aa12.85□□□□□ -0.35
SPTAN1-213ENST00000627809 HSPA2P54652 639 aa12.85□□□□□ -0.35
SPTAN1-213ENST00000627809 MYT1LQ9UL68 1186 aa12.85□□□□□ -0.35
SPTAN1-213ENST00000627809 SPAG9O60271 1321 aaKnown RBP12.85□□□□□ -0.35
SPTAN1-213ENST00000627809 A2MP01023 1474 aa12.85□□□□□ -0.35
SPTAN1-213ENST00000627809 PPARGC1BQ86YN6 1023 aaKnown RBP12.84□□□□□ -0.35
SPTAN1-213ENST00000627809 PLEKHH2Q8IVE3 1493 aa12.84□□□□□ -0.35
SPTAN1-213ENST00000627809 CEP152O94986 1710 aa12.83□□□□□ -0.36
SPTAN1-213ENST00000627809 CFAP65Q6ZU64 1925 aaKnown RBP12.83□□□□□ -0.36
SPTAN1-213ENST00000627809 MROH2AA6NES4 1674 aa12.83□□□□□ -0.36
SPTAN1-213ENST00000627809 MAST1Q9Y2H9 1570 aa12.82□□□□□ -0.36
SPTAN1-213ENST00000627809 DNMT1P26358 1616 aaKnown RBP12.82□□□□□ -0.36
SPTAN1-213ENST00000627809 FGD6Q6ZV73 1430 aa12.79□□□□□ -0.36
SPTAN1-213ENST00000627809 MYO3AQ8NEV4 1616 aa12.79□□□□□ -0.36
SPTAN1-213ENST00000627809 ABCC5O15440 1437 aa12.79□□□□□ -0.36
SPTAN1-213ENST00000627809 TCOF1Q13428 1488 aaKnown RBP12.78□□□□□ -0.36
SPTAN1-213ENST00000627809 RNF17Q9BXT8 1623 aaKnown RBP12.78□□□□□ -0.36
SPTAN1-213ENST00000627809 PTPRKQ15262 1439 aa12.77□□□□□ -0.37
SPTAN1-213ENST00000627809 RTEL1-TNFRSF6BF6WH68 1400 aa12.76□□□□□ -0.37
SPTAN1-213ENST00000627809 SETD1BQ9UPS6 1966 aaKnown RBP12.76□□□□□ -0.37
SPTAN1-213ENST00000627809 DAPK1P53355 1430 aa12.75□□□□□ -0.37
SPTAN1-213ENST00000627809 MIA2Q96PC5 1412 aa12.75□□□□□ -0.37
SPTAN1-213ENST00000627809 ZNF142P52746 1687 aaPredicted RBP12.74□□□□□ -0.37
SPTAN1-213ENST00000627809 DHX29Q7Z478 1369 aaKnown RBP12.74□□□□□ -0.37
SPTAN1-213ENST00000627809 GGT6Q6P531 493 aa12.73□□□□□ -0.37
SPTAN1-213ENST00000627809 DEPDC5O75140 1603 aa12.72□□□□□ -0.37
SPTAN1-213ENST00000627809 CAMSAP1Q5T5Y3 1602 aa12.72□□□□□ -0.37
SPTAN1-213ENST00000627809 EIF2AK4Q9P2K8 1649 aaKnown RBP12.72□□□□□ -0.37
SPTAN1-213ENST00000627809 ABCC3O15438 1527 aa12.72□□□□□ -0.37
SPTAN1-213ENST00000627809 ZMYM3Q14202 1370 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms