RNA–Protein interactions for RNA: ENST00000627490.2

PBX1-222, Transcript of PBX homeobox 1, humanhuman

TSL 2 BASIC

Gene PBX1, Length 1,769 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-222ENST00000627490 MIA2Q96PC5 1412 aa29.04■■■□□ 2.24
PBX1-222ENST00000627490 WDR7Q9Y4E6 1490 aa29■■■□□ 2.23
PBX1-222ENST00000627490 TCOF1Q13428 1488 aaKnown RBP28.97■■■□□ 2.23
PBX1-222ENST00000627490 NPM1P06748 294 aaKnown RBP eCLIP28.97■■■□□ 2.23
PBX1-222ENST00000627490 CDC42BPAQ5VT25 1732 aa28.97■■■□□ 2.23
PBX1-222ENST00000627490 PTPN23Q9H3S7 1636 aa28.96■■■□□ 2.23
PBX1-222ENST00000627490 GPATCH8Q9UKJ3 1502 aaKnown RBP28.96■■■□□ 2.23
PBX1-222ENST00000627490 FAM50AQ14320 339 aaKnown RBP28.96■■■□□ 2.23
PBX1-222ENST00000627490 CYB5RLQ6IPT4 315 aa28.95■■■□□ 2.22
PBX1-222ENST00000627490 ASXL2Q76L83 1435 aa28.95■■■□□ 2.22
PBX1-222ENST00000627490 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP28.95■■■□□ 2.22
PBX1-222ENST00000627490 TTC37Q6PGP7 1564 aa28.91■■■□□ 2.22
PBX1-222ENST00000627490 PREX2Q70Z35 1606 aa28.91■■■□□ 2.22
PBX1-222ENST00000627490 MYO5CQ9NQX4 1742 aa28.88■■■□□ 2.21
PBX1-222ENST00000627490 ABCA9Q8IUA7 1624 aa28.86■■■□□ 2.21
PBX1-222ENST00000627490 CDC42BPBQ9Y5S2 1711 aa28.85■■■□□ 2.21
PBX1-222ENST00000627490 ARAP3Q8WWN8 1544 aa28.83■■■□□ 2.21
PBX1-222ENST00000627490 CFDP1Q9UEE9 299 aaPredicted RBP28.8■■■□□ 2.2
PBX1-222ENST00000627490 KCNH8Q96L42 1107 aa28.78■■■□□ 2.2
PBX1-222ENST00000627490 CAMSAP2Q08AD1 1489 aa28.78■■■□□ 2.2
PBX1-222ENST00000627490 PLCH2O75038 1416 aa28.77■■■□□ 2.2
PBX1-222ENST00000627490 HFM1A2PYH4 1435 aa28.75■■■□□ 2.19
PBX1-222ENST00000627490 DNMT1P26358 1616 aaKnown RBP28.74■■■□□ 2.19
PBX1-222ENST00000627490 ARHGAP5Q13017 1502 aa28.72■■■□□ 2.19
PBX1-222ENST00000627490 SAMD9LQ8IVG5 1584 aa28.71■■■□□ 2.19
PBX1-222ENST00000627490 GLI2P10070 1586 aa28.71■■■□□ 2.19
PBX1-222ENST00000627490 SIN3AQ96ST3 1273 aa28.69■■■□□ 2.18
PBX1-222ENST00000627490 PPP1R15AO75807 674 aaPredicted RBP28.68■■■□□ 2.18
PBX1-222ENST00000627490 PLEKHH2Q8IVE3 1493 aa28.67■■■□□ 2.18
PBX1-222ENST00000627490 ARHGEF5Q12774 1597 aa28.67■■■□□ 2.18
PBX1-222ENST00000627490 DAPK1P53355 1430 aa28.66■■■□□ 2.18
PBX1-222ENST00000627490 ZNF644Q9H582 1327 aaPredicted RBP28.66■■■□□ 2.18
PBX1-222ENST00000627490 CROCC2H7BZ55 1655 aa28.66■■■□□ 2.18
PBX1-222ENST00000627490 DNAJC5Q9H3Z4 198 aa28.65■■■□□ 2.18
PBX1-222ENST00000627490 PTPRKQ15262 1439 aa28.65■■■□□ 2.18
PBX1-222ENST00000627490 KIAA1107Q9UPP5 1409 aa28.64■■■□□ 2.18
PBX1-222ENST00000627490 DIP2BQ9P265 1576 aa28.63■■■□□ 2.17
PBX1-222ENST00000627490 ABCC5O15440 1437 aa28.63■■■□□ 2.17
PBX1-222ENST00000627490 MAP3K4Q9Y6R4 1608 aa28.62■■■□□ 2.17
PBX1-222ENST00000627490 AKNAQ7Z591 1439 aa28.62■■■□□ 2.17
PBX1-222ENST00000627490 EFCAB2Q5VUJ9 269 aa28.61■■■□□ 2.17
PBX1-222ENST00000627490 MBD5Q9P267 1494 aa28.61■■■□□ 2.17
PBX1-222ENST00000627490 CFAP74Q9C0B2 1584 aa28.6■■■□□ 2.17
PBX1-222ENST00000627490 ZNF777Q9ULD5 760 aaPredicted RBP28.6■■■□□ 2.17
PBX1-222ENST00000627490 SHANK2Q9UPX8 1470 aa28.59■■■□□ 2.17
PBX1-222ENST00000627490 ABCC1P33527 1531 aa28.59■■■□□ 2.17
PBX1-222ENST00000627490 MYT1Q01538 1121 aa28.59■■■□□ 2.17
PBX1-222ENST00000627490 NAIPQ13075 1403 aa28.59■■■□□ 2.17
PBX1-222ENST00000627490 CD109Q6YHK3 1445 aa28.58■■■□□ 2.17
PBX1-222ENST00000627490 FANCAO15360 1455 aa28.57■■■□□ 2.16
PBX1-222ENST00000627490 RSPH4AQ5TD94 716 aa28.57■■■□□ 2.16
PBX1-222ENST00000627490 SYCP2Q9BX26 1530 aa28.56■■■□□ 2.16
PBX1-222ENST00000627490 ROCK1Q13464 1354 aa28.55■■■□□ 2.16
PBX1-222ENST00000627490 TONSLQ96HA7 1378 aa28.55■■■□□ 2.16
PBX1-222ENST00000627490 ADGBQ8N7X0 1667 aa28.55■■■□□ 2.16
PBX1-222ENST00000627490 CCDC141Q6ZP82 1450 aa28.54■■■□□ 2.16
PBX1-222ENST00000627490 ADGRL2O95490 1459 aa28.53■■■□□ 2.16
PBX1-222ENST00000627490 GCC2Q8IWJ2 1684 aa28.53■■■□□ 2.16
PBX1-222ENST00000627490 SUPT16HQ9Y5B9 1047 aaKnown RBP28.52■■■□□ 2.16
PBX1-222ENST00000627490 MAST1Q9Y2H9 1570 aa28.51■■■□□ 2.15
PBX1-222ENST00000627490 CCER2I3L3R5 266 aa28.51■■■□□ 2.15
PBX1-222ENST00000627490 ARHGEF12Q9NZN5 1544 aa28.49■■■□□ 2.15
PBX1-222ENST00000627490 NEO1Q92859 1461 aa28.48■■■□□ 2.15
PBX1-222ENST00000627490 DDX10Q13206 875 aaKnown RBP28.48■■■□□ 2.15
PBX1-222ENST00000627490 KIF13AQ9H1H9 1805 aa28.48■■■□□ 2.15
PBX1-222ENST00000627490 HNRNPMP52272 730 aaKnown RBP eCLIP28.45■■■□□ 2.15
PBX1-222ENST00000627490 C9orf84Q5VXU9 1444 aa28.45■■■□□ 2.14
PBX1-222ENST00000627490 ADGRL1O94910 1474 aa28.44■■■□□ 2.14
PBX1-222ENST00000627490 NCOA1Q15788 1441 aa28.42■■■□□ 2.14
PBX1-222ENST00000627490 FAM69CQ0P6D2 419 aa28.42■■■□□ 2.14
PBX1-222ENST00000627490 TSPY4P0CV99 314 aa28.4■■■□□ 2.14
PBX1-222ENST00000627490 TSPY10P0CW01 314 aa28.4■■■□□ 2.14
PBX1-222ENST00000627490 PPRC1Q5VV67 1664 aaKnown RBP28.4■■■□□ 2.14
PBX1-222ENST00000627490 ANKRD30AQ9BXX3 1397 aa28.39■■■□□ 2.14
PBX1-222ENST00000627490 CHIC2Q9UKJ5 165 aa28.39■■■□□ 2.13
PBX1-222ENST00000627490 PLXNC1O60486 1568 aa28.38■■■□□ 2.13
PBX1-222ENST00000627490 TRAPPC8Q9Y2L5 1435 aa28.38■■■□□ 2.13
PBX1-222ENST00000627490 ANP32CO43423 234 aa28.37■■■□□ 2.13
PBX1-222ENST00000627490 SCAPERQ9BY12 1400 aa28.37■■■□□ 2.13
PBX1-222ENST00000627490 TEX14Q8IWB6 1497 aa28.36■■■□□ 2.13
PBX1-222ENST00000627490 RTEL1-TNFRSF6BF6WH68 1400 aa28.34■■■□□ 2.13
PBX1-222ENST00000627490 RRP7BPQ9NSQ0 103 aa28.32■■■□□ 2.12
PBX1-222ENST00000627490 ZNF518AQ6AHZ1 1483 aa28.32■■■□□ 2.12
PBX1-222ENST00000627490 INO80Q9ULG1 1556 aaPredicted RBP28.31■■■□□ 2.12
PBX1-222ENST00000627490 KDM5CP41229 1560 aa28.31■■■□□ 2.12
PBX1-222ENST00000627490 ZFYVE16Q7Z3T8 1539 aa28.3■■■□□ 2.12
PBX1-222ENST00000627490 POGZQ7Z3K3 1410 aa28.3■■■□□ 2.12
PBX1-222ENST00000627490 TSPOAP1O95153 1857 aa28.29■■■□□ 2.12
PBX1-222ENST00000627490 KDM6BO15054 1643 aa28.26■■■□□ 2.12
PBX1-222ENST00000627490 KIF15Q9NS87 1388 aa28.25■■■□□ 2.11
PBX1-222ENST00000627490 DENND4BO75064 1496 aaPredicted RBP28.25■■■□□ 2.11
PBX1-222ENST00000627490 ATP7AQ04656 1500 aa28.25■■■□□ 2.11
PBX1-222ENST00000627490 RICTORQ6R327 1708 aa28.25■■■□□ 2.11
PBX1-222ENST00000627490 SPAG9O60271 1321 aaKnown RBP28.24■■■□□ 2.11
PBX1-222ENST00000627490 AFAP1Q8N556 730 aa28.23■■■□□ 2.11
PBX1-222ENST00000627490 ANKRD50Q9ULJ7 1429 aa28.23■■■□□ 2.11
PBX1-222ENST00000627490 DUOX2Q9NRD8 1548 aa28.22■■■□□ 2.11
PBX1-222ENST00000627490 MLH3Q9UHC1 1453 aa28.21■■■□□ 2.11
PBX1-222ENST00000627490 KIDINS220Q9ULH0 1771 aa28.2■■■□□ 2.1
PBX1-222ENST00000627490 HECW2Q9P2P5 1572 aa28.2■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms