RNA–Protein interactions for RNA: ENST00000626839.2

KCNQ2-213, Transcript of potassium voltage-gated channel subfamily Q member 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene KCNQ2, Length 9,213 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ2-213ENST00000626839 ERCC6Q03468 1493 aa22.16■■□□□ 1.14
KCNQ2-213ENST00000626839 CCNB3Q8WWL7 1395 aa22.15■■□□□ 1.14
KCNQ2-213ENST00000626839 CHMP4AQ9BY43 222 aa22.14■■□□□ 1.14
KCNQ2-213ENST00000626839 TPM4P67936 248 aa22.14■■□□□ 1.14
KCNQ2-213ENST00000626839 RTF1Q92541 710 aaKnown RBP22.14■■□□□ 1.14
KCNQ2-213ENST00000626839 ISY1Q9ULR0 285 aaKnown RBP22.11■■□□□ 1.13
KCNQ2-213ENST00000626839 GOLGA6L1Q8N7Z2 621 aa22.11■■□□□ 1.13
KCNQ2-213ENST00000626839 GPATCH3Q96I76 525 aa22.11■■□□□ 1.13
KCNQ2-213ENST00000626839 KTN1Q86UP2 1357 aaKnown RBP22.11■■□□□ 1.13
KCNQ2-213ENST00000626839 EIF4G1Q04637 1599 aaKnown RBP22.11■■□□□ 1.13
KCNQ2-213ENST00000626839 NCBP3Q53F19 620 aaKnown RBP22.1■■□□□ 1.13
KCNQ2-213ENST00000626839 TNIKQ9UKE5 1360 aa22.09■■□□□ 1.13
KCNQ2-213ENST00000626839 B4GALNT3Q6L9W6 998 aa22.07■■□□□ 1.12
KCNQ2-213ENST00000626839 ARHGAP35Q9NRY4 1499 aa22.07■■□□□ 1.12
KCNQ2-213ENST00000626839 EIF3AQ14152 1382 aaKnown RBP22.07■■□□□ 1.12
KCNQ2-213ENST00000626839 CSPP1Q1MSJ5 1256 aa22.07■■□□□ 1.12
KCNQ2-213ENST00000626839 PHF14O94880 888 aa22.06■■□□□ 1.12
KCNQ2-213ENST00000626839 MORC1Q86VD1 984 aa22.05■■□□□ 1.12
KCNQ2-213ENST00000626839 SRPK2P78362 688 aaKnown RBP22.05■■□□□ 1.12
KCNQ2-213ENST00000626839 SENP3-EIF4A1A0A087X0R7 540 aa22.05■■□□□ 1.12
KCNQ2-213ENST00000626839 KAT6BQ8WYB5 2073 aa22.03■■□□□ 1.12
KCNQ2-213ENST00000626839 HDAC5Q9UQL6 1122 aa22.03■■□□□ 1.12
KCNQ2-213ENST00000626839 TIMELESSQ9UNS1 1208 aa22.02■■□□□ 1.12
KCNQ2-213ENST00000626839 CCER2I3L3R5 266 aa22.02■■□□□ 1.11
KCNQ2-213ENST00000626839 DEKP35659 375 aaKnown RBP22.01■■□□□ 1.11
KCNQ2-213ENST00000626839 TNNT3P45378 269 aaPredicted RBP22.01■■□□□ 1.11
KCNQ2-213ENST00000626839 TMX4Q9H1E5 349 aaPredicted RBP22.01■■□□□ 1.11
KCNQ2-213ENST00000626839 BAZ1AQ9NRL2 1556 aaPredicted RBP22.01■■□□□ 1.11
KCNQ2-213ENST00000626839 DCAF11Q8TEB1 546 aa22.01■■□□□ 1.11
KCNQ2-213ENST00000626839 A0A0U1RQG5 324 aaPredicted RBP22■■□□□ 1.11
KCNQ2-213ENST00000626839 RWDD1Q9H446 243 aaPredicted RBP21.99■■□□□ 1.11
KCNQ2-213ENST00000626839 SPRYD3Q8NCJ5 442 aa21.99■■□□□ 1.11
KCNQ2-213ENST00000626839 SPAG9O60271 1321 aaKnown RBP21.98■■□□□ 1.11
KCNQ2-213ENST00000626839 HDGFL2Q7Z4V5 671 aaPredicted RBP21.96■■□□□ 1.11
KCNQ2-213ENST00000626839 MYO15BQ96JP2 1530 aa21.95■■□□□ 1.1
KCNQ2-213ENST00000626839 ROCK2O75116 1388 aaKnown RBP21.93■■□□□ 1.1
KCNQ2-213ENST00000626839 ITPRIPQ8IWB1 547 aa21.92■■□□□ 1.1
KCNQ2-213ENST00000626839 HMMRO75330 724 aa21.92■■□□□ 1.1
KCNQ2-213ENST00000626839 KIF3AQ9Y496 699 aa21.92■■□□□ 1.1
KCNQ2-213ENST00000626839 PMFBP1Q8TBY8 1022 aa21.91■■□□□ 1.1
KCNQ2-213ENST00000626839 RALBP1Q15311 655 aa21.91■■□□□ 1.1
KCNQ2-213ENST00000626839 SETD5Q9C0A6 1442 aa21.9■■□□□ 1.1
KCNQ2-213ENST00000626839 TCERG1O14776 1098 aaKnown RBP21.9■■□□□ 1.1
KCNQ2-213ENST00000626839 AMER1Q5JTC6 1135 aaPredicted RBP21.9■■□□□ 1.1
KCNQ2-213ENST00000626839 PRM3Q9NNZ6 103 aa21.89■■□□□ 1.09
KCNQ2-213ENST00000626839 GORABQ5T7V8 394 aa21.88■■□□□ 1.09
KCNQ2-213ENST00000626839 RCAN3Q9UKA8 241 aa21.88■■□□□ 1.09
KCNQ2-213ENST00000626839 GOLGA6L3A6NEY3 463 aa21.87■■□□□ 1.09
KCNQ2-213ENST00000626839 HSP90B1P14625 803 aaKnown RBP21.87■■□□□ 1.09
KCNQ2-213ENST00000626839 STK31Q9BXU1 1019 aa21.87■■□□□ 1.09
KCNQ2-213ENST00000626839 CEP89Q96ST8 783 aa21.87■■□□□ 1.09
KCNQ2-213ENST00000626839 SOX12O15370 315 aa21.86■■□□□ 1.09
KCNQ2-213ENST00000626839 TPM3P06753 285 aa21.86■■□□□ 1.09
KCNQ2-213ENST00000626839 RASSF8Q8NHQ8 419 aa21.86■■□□□ 1.09
KCNQ2-213ENST00000626839 PHLDB1Q86UU1 1377 aa21.86■■□□□ 1.09
KCNQ2-213ENST00000626839 APBB1O00213 710 aa21.85■■□□□ 1.09
KCNQ2-213ENST00000626839 GZF1Q9H116 711 aaPredicted RBP21.85■■□□□ 1.09
KCNQ2-213ENST00000626839 SETQ01105 290 aaPredicted RBP21.84■■□□□ 1.09
KCNQ2-213ENST00000626839 SIN3AQ96ST3 1273 aa21.84■■□□□ 1.09
KCNQ2-213ENST00000626839 ST18O60284 1047 aa21.83■■□□□ 1.09
KCNQ2-213ENST00000626839 TRIM6-TRIM34B2RNG4 842 aa21.82■■□□□ 1.08
KCNQ2-213ENST00000626839 RBM19Q9Y4C8 960 aaKnown RBP21.82■■□□□ 1.08
KCNQ2-213ENST00000626839 KIF16BQ96L93 1317 aa21.82■■□□□ 1.08
KCNQ2-213ENST00000626839 SLKQ9H2G2 1235 aaPredicted RBP21.82■■□□□ 1.08
KCNQ2-213ENST00000626839 CHMP4CQ96CF2 233 aa21.81■■□□□ 1.08
KCNQ2-213ENST00000626839 U2AF1L5P0DN76 240 aaPredicted RBP21.8■■□□□ 1.08
KCNQ2-213ENST00000626839 U2AF1Q01081 240 aaKnown RBP eCLIP21.8■■□□□ 1.08
KCNQ2-213ENST00000626839 TAF7LQ5H9L4 462 aa21.8■■□□□ 1.08
KCNQ2-213ENST00000626839 DDX11L8A8MPP1 907 aa21.78■■□□□ 1.08
KCNQ2-213ENST00000626839 TSR1Q2NL82 804 aaKnown RBP21.78■■□□□ 1.08
KCNQ2-213ENST00000626839 LMOD3Q0VAK6 560 aa21.78■■□□□ 1.08
KCNQ2-213ENST00000626839 CHMP3Q9Y3E7 222 aa21.77■■□□□ 1.08
KCNQ2-213ENST00000626839 PAK3O75914 559 aaPredicted RBP21.76■■□□□ 1.07
KCNQ2-213ENST00000626839 CCDC70Q6NSX1 233 aa21.76■■□□□ 1.07
KCNQ2-213ENST00000626839 ATP6V1DQ9Y5K8 247 aa21.76■■□□□ 1.07
KCNQ2-213ENST00000626839 CARMIL2Q6F5E8 1435 aa21.75■■□□□ 1.07
KCNQ2-213ENST00000626839 SAFB2Q14151 953 aaKnown RBP eCLIP21.75■■□□□ 1.07
KCNQ2-213ENST00000626839 FMN1Q68DA7 1419 aa21.74■■□□□ 1.07
KCNQ2-213ENST00000626839 SMC4Q9NTJ3 1288 aa21.74■■□□□ 1.07
KCNQ2-213ENST00000626839 TERF2IPQ9NYB0 399 aa21.74■■□□□ 1.07
KCNQ2-213ENST00000626839 ZNF330Q9Y3S2 320 aaPredicted RBP21.73■■□□□ 1.07
KCNQ2-213ENST00000626839 CSB-PGBD3P0DP91 1061 aa21.73■■□□□ 1.07
KCNQ2-213ENST00000626839 ARID3AQ99856 593 aa21.73■■□□□ 1.07
KCNQ2-213ENST00000626839 TPM1P09493 284 aa21.72■■□□□ 1.07
KCNQ2-213ENST00000626839 MFAP1P55081 439 aaKnown RBP21.72■■□□□ 1.07
KCNQ2-213ENST00000626839 CUX2O14529 1486 aa21.72■■□□□ 1.07
KCNQ2-213ENST00000626839 VPS8Q8N3P4 1428 aa21.71■■□□□ 1.07
KCNQ2-213ENST00000626839 TPM2P07951 284 aa21.7■■□□□ 1.07
KCNQ2-213ENST00000626839 GPS2Q13227 327 aa21.7■■□□□ 1.07
KCNQ2-213ENST00000626839 IPO9Q96P70 1041 aaKnown RBP21.7■■□□□ 1.06
KCNQ2-213ENST00000626839 G3V3G9 751 aa21.69■■□□□ 1.06
KCNQ2-213ENST00000626839 DCAF8Q5TAQ9 597 aa21.69■■□□□ 1.06
KCNQ2-213ENST00000626839 STK26Q9P289 416 aa21.68■■□□□ 1.06
KCNQ2-213ENST00000626839 CREBRFQ8IUR6 639 aa21.68■■□□□ 1.06
KCNQ2-213ENST00000626839 CARMIL1Q5VZK9 1371 aa21.68■■□□□ 1.06
KCNQ2-213ENST00000626839 TPD52L1Q16890 204 aaPredicted RBP21.67■■□□□ 1.06
KCNQ2-213ENST00000626839 SF3A1Q15459 793 aaKnown RBP21.67■■□□□ 1.06
KCNQ2-213ENST00000626839 ANKRD30AQ9BXX3 1397 aa21.67■■□□□ 1.06
KCNQ2-213ENST00000626839 LRRFIP1Q32MZ4 808 aaKnown RBP21.67■■□□□ 1.06
KCNQ2-213ENST00000626839 HSPA5P11021 654 aaKnown RBP21.66■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms