RNA–Protein interactions for RNA: ENST00000625364.1

PPA1-206, Transcript of pyrophosphatase (inorganic) 1, human

TSL 5 BASIC

Gene PPA1, Length 644 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPA1-206	ENST00000625364	ARHGEF12	Q9NZN5	1544 aa		24.34	■■□□□ 1.49
PPA1-206	ENST00000625364	SCAPER	Q9BY12	1400 aa		24.34	■■□□□ 1.49
PPA1-206	ENST00000625364	CDK13	Q14004	1512 aa	Known RBP	24.32	■■□□□ 1.48
PPA1-206	ENST00000625364	C9orf84	Q5VXU9	1444 aa		24.31	■■□□□ 1.48
PPA1-206	ENST00000625364	PLCH2	O75038	1416 aa		24.3	■■□□□ 1.48
PPA1-206	ENST00000625364	ATP10A	O60312	1499 aa		24.3	■■□□□ 1.48
PPA1-206	ENST00000625364	EEA1	Q15075	1411 aa		24.29	■■□□□ 1.48
PPA1-206	ENST00000625364	MYO5C	Q9NQX4	1742 aa		24.26	■■□□□ 1.47
PPA1-206	ENST00000625364	DISP3	Q9P2K9	1392 aa		24.26	■■□□□ 1.47
PPA1-206	ENST00000625364	STRC	Q7RTU9	1775 aa		24.24	■■□□□ 1.47
PPA1-206	ENST00000625364	CEBPA	P49715	358 aa	Predicted RBP	24.23	■■□□□ 1.47
PPA1-206	ENST00000625364	UHRF1BP1	Q6BDS2	1440 aa		24.21	■■□□□ 1.47
PPA1-206	ENST00000625364	DMRT2	Q9Y5R5	561 aa		24.21	■■□□□ 1.47
PPA1-206	ENST00000625364	SETD1B	Q9UPS6	1966 aa	Known RBP	24.21	■■□□□ 1.47
PPA1-206	ENST00000625364	EFCAB2	Q5VUJ9	269 aa		24.2	■■□□□ 1.46
PPA1-206	ENST00000625364	ILDR2	Q71H61	639 aa		24.2	■■□□□ 1.46
PPA1-206	ENST00000625364	ZNF518A	Q6AHZ1	1483 aa		24.19	■■□□□ 1.46
PPA1-206	ENST00000625364	SOCS7	O14512	581 aa		24.16	■■□□□ 1.46
PPA1-206	ENST00000625364	KDM5C	P41229	1560 aa		24.16	■■□□□ 1.46
PPA1-206	ENST00000625364	KIF14	Q15058	1648 aa		24.15	■■□□□ 1.46
PPA1-206	ENST00000625364	SPATA31D1	Q6ZQQ2	1576 aa		24.13	■■□□□ 1.45
PPA1-206	ENST00000625364	ARHGAP5	Q13017	1502 aa		24.13	■■□□□ 1.45
PPA1-206	ENST00000625364	DIP2C	Q9Y2E4	1556 aa		24.12	■■□□□ 1.45
PPA1-206	ENST00000625364	ATP1B4	Q9UN42	357 aa	Predicted RBP	24.12	■■□□□ 1.45
PPA1-206	ENST00000625364	RERE	Q9P2R6	1566 aa		24.11	■■□□□ 1.45
PPA1-206	ENST00000625364	FMN1	Q68DA7	1419 aa		24.1	■■□□□ 1.45
PPA1-206	ENST00000625364	CDK11A	Q9UQ88	783 aa	Predicted RBP	24.1	■■□□□ 1.45
PPA1-206	ENST00000625364	C3	P01024	1663 aa		24.1	■■□□□ 1.45
PPA1-206	ENST00000625364	PTPRT	O14522	1441 aa		24.1	■■□□□ 1.45
PPA1-206	ENST00000625364	AFAP1	Q8N556	730 aa		24.09	■■□□□ 1.45
PPA1-206	ENST00000625364	MYT1L	Q9UL68	1186 aa		24.09	■■□□□ 1.45
PPA1-206	ENST00000625364	ABCA6	Q8N139	1617 aa		24.08	■■□□□ 1.45
PPA1-206	ENST00000625364	TRO	Q12816	1431 aa	Predicted RBP	24.07	■■□□□ 1.44
PPA1-206	ENST00000625364	CLIP1	P30622	1438 aa		24.04	■■□□□ 1.44
PPA1-206	ENST00000625364	MLH3	Q9UHC1	1453 aa		24.03	■■□□□ 1.44
PPA1-206	ENST00000625364	LTBP4	Q8N2S1	1624 aa		24.02	■■□□□ 1.44
PPA1-206	ENST00000625364	AGL	P35573	1532 aa		24.02	■■□□□ 1.44
PPA1-206	ENST00000625364	CDC42BPB	Q9Y5S2	1711 aa		24.01	■■□□□ 1.43
PPA1-206	ENST00000625364	ARHGAP35	Q9NRY4	1499 aa		24.01	■■□□□ 1.43
PPA1-206	ENST00000625364	ESF1	Q9H501	851 aa	Known RBP	24.01	■■□□□ 1.43
PPA1-206	ENST00000625364	TRAPPC8	Q9Y2L5	1435 aa		24.01	■■□□□ 1.43
PPA1-206	ENST00000625364	IQSEC2	Q5JU85	1478 aa		24	■■□□□ 1.43
PPA1-206	ENST00000625364	NCOA1	Q15788	1441 aa		23.99	■■□□□ 1.43
PPA1-206	ENST00000625364	ABCC1	P33527	1531 aa		23.98	■■□□□ 1.43
PPA1-206	ENST00000625364	LRRIQ1	Q96JM4	1722 aa		23.98	■■□□□ 1.43
PPA1-206	ENST00000625364	PREX2	Q70Z35	1606 aa		23.97	■■□□□ 1.43
PPA1-206	ENST00000625364	ITSN2	Q9NZM3	1697 aa		23.97	■■□□□ 1.43
PPA1-206	ENST00000625364	UBTF	P17480	764 aa	Known RBP	23.96	■■□□□ 1.43
PPA1-206	ENST00000625364	CNTLN	Q9NXG0	1405 aa		23.95	■■□□□ 1.42
PPA1-206	ENST00000625364	EHMT2	Q96KQ7	1210 aa		23.95	■■□□□ 1.42
PPA1-206	ENST00000625364	KIDINS220	Q9ULH0	1771 aa		23.93	■■□□□ 1.42
PPA1-206	ENST00000625364	CAMSAP1	Q5T5Y3	1602 aa		23.91	■■□□□ 1.42
PPA1-206	ENST00000625364	MROH2A	A6NES4	1674 aa		23.89	■■□□□ 1.42
PPA1-206	ENST00000625364	NPAT	Q14207	1427 aa		23.88	■■□□□ 1.41
PPA1-206	ENST00000625364	CDC42BPA	Q5VT25	1732 aa		23.85	■■□□□ 1.41
PPA1-206	ENST00000625364	CCDC18	Q5T9S5	1454 aa		23.84	■■□□□ 1.41
PPA1-206	ENST00000625364	SAMD9L	Q8IVG5	1584 aa		23.82	■■□□□ 1.4
PPA1-206	ENST00000625364	ZMYM3	Q14202	1370 aa		23.8	■■□□□ 1.4
PPA1-206	ENST00000625364	ZNF142	P52746	1687 aa	Predicted RBP	23.8	■■□□□ 1.4
PPA1-206	ENST00000625364	SUPT6H	Q7KZ85	1726 aa	Known RBP	23.8	■■□□□ 1.4
PPA1-206	ENST00000625364	ZNF335	Q9H4Z2	1342 aa	Predicted RBP	23.8	■■□□□ 1.4
PPA1-206	ENST00000625364	UBAP1L	F5GYI3	381 aa		23.79	■■□□□ 1.4
PPA1-206	ENST00000625364	MYO3A	Q8NEV4	1616 aa		23.79	■■□□□ 1.4
PPA1-206	ENST00000625364	NCKAP5L	Q9HCH0	1330 aa		23.79	■■□□□ 1.4
PPA1-206	ENST00000625364	CASKIN1	Q8WXD9	1431 aa		23.78	■■□□□ 1.4
PPA1-206	ENST00000625364	SYCP2	Q9BX26	1530 aa		23.78	■■□□□ 1.4
PPA1-206	ENST00000625364	CLTC	Q00610	1675 aa	Known RBP	23.77	■■□□□ 1.4
PPA1-206	ENST00000625364	PLA2R1	Q13018	1463 aa		23.76	■■□□□ 1.39
PPA1-206	ENST00000625364	CEP170B	Q9Y4F5	1589 aa	Predicted RBP	23.74	■■□□□ 1.39
PPA1-206	ENST00000625364	ZNF777	Q9ULD5	760 aa	Predicted RBP	23.74	■■□□□ 1.39
PPA1-206	ENST00000625364	SPAG9	O60271	1321 aa	Known RBP	23.74	■■□□□ 1.39
PPA1-206	ENST00000625364	PKD2	Q13563	968 aa		23.73	■■□□□ 1.39
PPA1-206	ENST00000625364	ATP7A	Q04656	1500 aa		23.73	■■□□□ 1.39
PPA1-206	ENST00000625364	TCOF1	Q13428	1488 aa	Known RBP	23.72	■■□□□ 1.39
PPA1-206	ENST00000625364	PLXNC1	O60486	1568 aa		23.72	■■□□□ 1.39
PPA1-206	ENST00000625364	INO80	Q9ULG1	1556 aa	Predicted RBP	23.7	■■□□□ 1.38
PPA1-206	ENST00000625364	PTPRK	Q15262	1439 aa		23.7	■■□□□ 1.38
PPA1-206	ENST00000625364	A2M	P01023	1474 aa		23.68	■■□□□ 1.38
PPA1-206	ENST00000625364	GPATCH8	Q9UKJ3	1502 aa	Known RBP	23.68	■■□□□ 1.38
PPA1-206	ENST00000625364	FYCO1	Q9BQS8	1478 aa		23.68	■■□□□ 1.38
PPA1-206	ENST00000625364	HNRNPM	P52272	730 aa	Known RBP eCLIP	23.67	■■□□□ 1.38
PPA1-206	ENST00000625364	PLEKHH2	Q8IVE3	1493 aa		23.65	■■□□□ 1.38
PPA1-206	ENST00000625364	PPP6R1	Q9UPN7	881 aa		23.65	■■□□□ 1.38
PPA1-206	ENST00000625364	KIAA1107	Q9UPP5	1409 aa		23.65	■■□□□ 1.38
PPA1-206	ENST00000625364	GGT6	Q6P531	493 aa		23.63	■■□□□ 1.37
PPA1-206	ENST00000625364	A2ML1	A8K2U0	1454 aa		23.61	■■□□□ 1.37
PPA1-206	ENST00000625364	MED1	Q15648	1581 aa	Predicted RBP	23.61	■■□□□ 1.37
PPA1-206	ENST00000625364	ADGB	Q8N7X0	1667 aa		23.6	■■□□□ 1.37
PPA1-206	ENST00000625364	DNMT1	P26358	1616 aa	Known RBP	23.59	■■□□□ 1.37
PPA1-206	ENST00000625364	CFDP1	Q9UEE9	299 aa	Predicted RBP	23.59	■■□□□ 1.37
PPA1-206	ENST00000625364	SCAF1	Q9H7N4	1312 aa	Known RBP	23.59	■■□□□ 1.37
PPA1-206	ENST00000625364	POLR1A	O95602	1720 aa	Predicted RBP	23.58	■■□□□ 1.37
PPA1-206	ENST00000625364	CCNB3	Q8WWL7	1395 aa		23.56	■■□□□ 1.36
PPA1-206	ENST00000625364	HSPA1L	P34931	641 aa		23.56	■■□□□ 1.36
PPA1-206	ENST00000625364	CPS1	P31327	1500 aa		23.55	■■□□□ 1.36
PPA1-206	ENST00000625364	PIP4K2B	P78356	416 aa		23.54	■■□□□ 1.36
PPA1-206	ENST00000625364	NEURL4	Q96JN8	1562 aa		23.53	■■□□□ 1.36
PPA1-206	ENST00000625364	TOM1	O60784	492 aa		23.52	■■□□□ 1.36
PPA1-206	ENST00000625364	SHANK2	Q9UPX8	1470 aa		23.5	■■□□□ 1.35
PPA1-206	ENST00000625364	TNR	Q92752	1358 aa		23.49	■■□□□ 1.35

Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms