RNA–Protein interactions for RNA: ENST00000621703.4

NPRL3-213, Transcript of NPR3 like, GATOR1 complex subunit, humanhuman

TSL 1 (best)

Gene NPRL3, Length 2,812 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPRL3-213ENST00000621703 KDM6BO15054 1643 aa23.49■■□□□ 1.35
NPRL3-213ENST00000621703 OSCARQ8IYS5 282 aa23.48■■□□□ 1.35
NPRL3-213ENST00000621703 GPATCH8Q9UKJ3 1502 aaKnown RBP23.46■■□□□ 1.35
NPRL3-213ENST00000621703 ABCC5O15440 1437 aa23.45■■□□□ 1.34
NPRL3-213ENST00000621703 DAPK1P53355 1430 aa23.44■■□□□ 1.34
NPRL3-213ENST00000621703 PPP1R15AO75807 674 aaPredicted RBP23.39■■□□□ 1.34
NPRL3-213ENST00000621703 CAMSAP2Q08AD1 1489 aa23.38■■□□□ 1.33
NPRL3-213ENST00000621703 TONSLQ96HA7 1378 aa23.38■■□□□ 1.33
NPRL3-213ENST00000621703 CLASP1Q7Z460 1538 aa23.38■■□□□ 1.33
NPRL3-213ENST00000621703 MPHOSPH9Q99550 1183 aa23.37■■□□□ 1.33
NPRL3-213ENST00000621703 SHROOM2Q13796 1616 aa23.36■■□□□ 1.33
NPRL3-213ENST00000621703 DENND4BO75064 1496 aaPredicted RBP23.35■■□□□ 1.33
NPRL3-213ENST00000621703 SCAF1Q9H7N4 1312 aaKnown RBP23.33■■□□□ 1.32
NPRL3-213ENST00000621703 CYB5RLQ6IPT4 315 aa23.31■■□□□ 1.32
NPRL3-213ENST00000621703 DNMT1P26358 1616 aaKnown RBP23.3■■□□□ 1.32
NPRL3-213ENST00000621703 GCC2Q8IWJ2 1684 aa23.3■■□□□ 1.32
NPRL3-213ENST00000621703 SLC4A1APQ9BWU0 796 aaKnown RBP23.29■■□□□ 1.32
NPRL3-213ENST00000621703 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.28■■□□□ 1.32
NPRL3-213ENST00000621703 AKNAQ7Z591 1439 aa23.28■■□□□ 1.32
NPRL3-213ENST00000621703 TSPY4P0CV99 314 aa23.28■■□□□ 1.32
NPRL3-213ENST00000621703 TSPY10P0CW01 314 aa23.28■■□□□ 1.32
NPRL3-213ENST00000621703 ABCC10Q5T3U5 1492 aa23.28■■□□□ 1.32
NPRL3-213ENST00000621703 ACIN1Q9UKV3 1341 aaKnown RBP23.28■■□□□ 1.32
NPRL3-213ENST00000621703 MYT1LQ9UL68 1186 aa23.28■■□□□ 1.32
NPRL3-213ENST00000621703 ABCC2Q92887 1545 aa23.27■■□□□ 1.32
NPRL3-213ENST00000621703 DDX10Q13206 875 aaKnown RBP23.26■■□□□ 1.31
NPRL3-213ENST00000621703 TIMELESSQ9UNS1 1208 aa23.26■■□□□ 1.31
NPRL3-213ENST00000621703 ROCK1Q13464 1354 aa23.26■■□□□ 1.31
NPRL3-213ENST00000621703 MYT1Q01538 1121 aa23.25■■□□□ 1.31
NPRL3-213ENST00000621703 CDC42BPAQ5VT25 1732 aa23.25■■□□□ 1.31
NPRL3-213ENST00000621703 TTC37Q6PGP7 1564 aa23.25■■□□□ 1.31
NPRL3-213ENST00000621703 NCOA1Q15788 1441 aa23.24■■□□□ 1.31
NPRL3-213ENST00000621703 ADCY10Q96PN6 1610 aa23.23■■□□□ 1.31
NPRL3-213ENST00000621703 ARHGAP5Q13017 1502 aa23.22■■□□□ 1.31
NPRL3-213ENST00000621703 AFAP1Q8N556 730 aa23.22■■□□□ 1.31
NPRL3-213ENST00000621703 ITSN2Q9NZM3 1697 aa23.21■■□□□ 1.31
NPRL3-213ENST00000621703 CENPBP07199 599 aaPredicted RBP23.2■■□□□ 1.3
NPRL3-213ENST00000621703 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.2■■□□□ 1.3
NPRL3-213ENST00000621703 ZCCHC11Q5TAX3 1644 aaKnown RBP23.18■■□□□ 1.3
NPRL3-213ENST00000621703 ZNF326Q5BKZ1 582 aaKnown RBP23.18■■□□□ 1.3
NPRL3-213ENST00000621703 L3MBTL2Q969R5 705 aa23.18■■□□□ 1.3
NPRL3-213ENST00000621703 C9orf84Q5VXU9 1444 aa23.16■■□□□ 1.3
NPRL3-213ENST00000621703 NPM1P06748 294 aaKnown RBP eCLIP23.15■■□□□ 1.3
NPRL3-213ENST00000621703 ANKRD30AQ9BXX3 1397 aa23.15■■□□□ 1.3
NPRL3-213ENST00000621703 PKD2Q13563 968 aa23.14■■□□□ 1.3
NPRL3-213ENST00000621703 SYCP2Q9BX26 1530 aa23.14■■□□□ 1.3
NPRL3-213ENST00000621703 KDM5BQ9UGL1 1544 aa23.13■■□□□ 1.29
NPRL3-213ENST00000621703 CDC42BPBQ9Y5S2 1711 aa23.13■■□□□ 1.29
NPRL3-213ENST00000621703 SAMD9LQ8IVG5 1584 aa23.12■■□□□ 1.29
NPRL3-213ENST00000621703 ANKRD30BQ9BXX2 1392 aa23.11■■□□□ 1.29
NPRL3-213ENST00000621703 KIF15Q9NS87 1388 aa23.11■■□□□ 1.29
NPRL3-213ENST00000621703 ANKRD50Q9ULJ7 1429 aa23.11■■□□□ 1.29
NPRL3-213ENST00000621703 NUP155O75694 1391 aa23.11■■□□□ 1.29
NPRL3-213ENST00000621703 PZPP20742 1482 aa23.08■■□□□ 1.29
NPRL3-213ENST00000621703 MBD5Q9P267 1494 aa23.08■■□□□ 1.29
NPRL3-213ENST00000621703 ARHGEF12Q9NZN5 1544 aa23.08■■□□□ 1.29
NPRL3-213ENST00000621703 EFCAB2Q5VUJ9 269 aa23.08■■□□□ 1.29
NPRL3-213ENST00000621703 GTF3C3Q9Y5Q9 886 aa23.07■■□□□ 1.28
NPRL3-213ENST00000621703 ASXL2Q76L83 1435 aa23.07■■□□□ 1.28
NPRL3-213ENST00000621703 ADGRL2O95490 1459 aa23.06■■□□□ 1.28
NPRL3-213ENST00000621703 TRAPPC8Q9Y2L5 1435 aa23.05■■□□□ 1.28
NPRL3-213ENST00000621703 NBPF8Q3BBV2 869 aa23.04■■□□□ 1.28
NPRL3-213ENST00000621703 CROCC2H7BZ55 1655 aa23.04■■□□□ 1.28
NPRL3-213ENST00000621703 KDM2AQ9Y2K7 1162 aa23.02■■□□□ 1.28
NPRL3-213ENST00000621703 ADGBQ8N7X0 1667 aa23.02■■□□□ 1.28
NPRL3-213ENST00000621703 HSPA5P11021 654 aaKnown RBP23.01■■□□□ 1.27
NPRL3-213ENST00000621703 PREX2Q70Z35 1606 aa23■■□□□ 1.27
NPRL3-213ENST00000621703 WDR7Q9Y4E6 1490 aa22.99■■□□□ 1.27
NPRL3-213ENST00000621703 RGL3Q3MIN7 710 aa22.99■■□□□ 1.27
NPRL3-213ENST00000621703 CCDC141Q6ZP82 1450 aa22.99■■□□□ 1.27
NPRL3-213ENST00000621703 PLCH2O75038 1416 aa22.99■■□□□ 1.27
NPRL3-213ENST00000621703 RPRD2Q5VT52 1461 aaKnown RBP22.98■■□□□ 1.27
NPRL3-213ENST00000621703 CNGB1Q14028 1251 aaPredicted RBP22.98■■□□□ 1.27
NPRL3-213ENST00000621703 UHRF1BP1LA0JNW5 1464 aa22.97■■□□□ 1.27
NPRL3-213ENST00000621703 SPAG9O60271 1321 aaKnown RBP22.95■■□□□ 1.26
NPRL3-213ENST00000621703 MYO5CQ9NQX4 1742 aa22.95■■□□□ 1.26
NPRL3-213ENST00000621703 PLEKHH2Q8IVE3 1493 aa22.95■■□□□ 1.26
NPRL3-213ENST00000621703 SHANK2Q9UPX8 1470 aa22.95■■□□□ 1.26
NPRL3-213ENST00000621703 RAPGEF3O95398 923 aa22.95■■□□□ 1.26
NPRL3-213ENST00000621703 KIAA1107Q9UPP5 1409 aa22.95■■□□□ 1.26
NPRL3-213ENST00000621703 SCAPERQ9BY12 1400 aa22.92■■□□□ 1.26
NPRL3-213ENST00000621703 TEX14Q8IWB6 1497 aa22.92■■□□□ 1.26
NPRL3-213ENST00000621703 FANCAO15360 1455 aa22.91■■□□□ 1.26
NPRL3-213ENST00000621703 EIF4G2P78344 907 aaKnown RBP eCLIP22.91■■□□□ 1.261e-6■■■■□ 25
NPRL3-213ENST00000621703 SENP3Q9H4L4 574 aaPredicted RBP22.9■■□□□ 1.26
NPRL3-213ENST00000621703 ARHGEF5Q12774 1597 aa22.9■■□□□ 1.26
NPRL3-213ENST00000621703 C11orf95C9JLR9 678 aaPredicted RBP22.9■■□□□ 1.26
NPRL3-213ENST00000621703 POLR3GLQ9BT43 218 aa22.89■■□□□ 1.26
NPRL3-213ENST00000621703 WASHC2AQ641Q2 1341 aa22.89■■□□□ 1.25
NPRL3-213ENST00000621703 RSPH4AQ5TD94 716 aa22.87■■□□□ 1.25
NPRL3-213ENST00000621703 KIF3BO15066 747 aa22.87■■□□□ 1.25
NPRL3-213ENST00000621703 ANP32CO43423 234 aa22.83■■□□□ 1.25
NPRL3-213ENST00000621703 FAM69CQ0P6D2 419 aa22.83■■□□□ 1.24
NPRL3-213ENST00000621703 DCAF11Q8TEB1 546 aa22.83■■□□□ 1.24
NPRL3-213ENST00000621703 ADGRL1O94910 1474 aa22.83■■□□□ 1.24
NPRL3-213ENST00000621703 CD109Q6YHK3 1445 aa22.82■■□□□ 1.24
NPRL3-213ENST00000621703 GGT6Q6P531 493 aa22.8■■□□□ 1.24
NPRL3-213ENST00000621703 ABCC1P33527 1531 aa22.78■■□□□ 1.24
NPRL3-213ENST00000621703 FAM135AQ9P2D6 1515 aa22.76■■□□□ 1.23
NPRL3-213ENST00000621703 RIMBP3CA6NJZ7 1639 aa22.74■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms