RNA–Protein interactions for RNA: ENST00000620962.1

ITM2C-210, Transcript of integral membrane protein 2C, humanhuman

BASIC

Gene ITM2C, Length 501 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITM2C-210ENST00000620962 SIGLEC1Q9BZZ2 1709 aa33.21■■■□□ 2.91
ITM2C-210ENST00000620962 EHMT2Q96KQ7 1210 aa33.2■■■□□ 2.91
ITM2C-210ENST00000620962 LMTK3Q96Q04 1460 aa33.19■■■□□ 2.9
ITM2C-210ENST00000620962 CDK11AQ9UQ88 783 aaPredicted RBP33.19■■■□□ 2.9
ITM2C-210ENST00000620962 ATP1B4Q9UN42 357 aaPredicted RBP33.18■■■□□ 2.9
ITM2C-210ENST00000620962 KIF14Q15058 1648 aa33.15■■■□□ 2.9
ITM2C-210ENST00000620962 EFCAB2Q5VUJ9 269 aa33.14■■■□□ 2.9
ITM2C-210ENST00000620962 TROQ12816 1431 aaPredicted RBP33.13■■■□□ 2.89
ITM2C-210ENST00000620962 LRRIQ1Q96JM4 1722 aa33.11■■■□□ 2.89
ITM2C-210ENST00000620962 FER1L4A9Z1Z3 1794 aa33.08■■■□□ 2.89
ITM2C-210ENST00000620962 ATP10AO60312 1499 aa33.07■■■□□ 2.88
ITM2C-210ENST00000620962 CLIP1P30622 1438 aa33.07■■■□□ 2.88
ITM2C-210ENST00000620962 C9orf84Q5VXU9 1444 aa33.05■■■□□ 2.88
ITM2C-210ENST00000620962 ZNF518AQ6AHZ1 1483 aa33.05■■■□□ 2.88
ITM2C-210ENST00000620962 ARHGAP5Q13017 1502 aa33.03■■■□□ 2.88
ITM2C-210ENST00000620962 FBXO41Q8TF61 875 aa33.03■■■□□ 2.88
ITM2C-210ENST00000620962 KDM5CP41229 1560 aa33.02■■■□□ 2.88
ITM2C-210ENST00000620962 ARHGEF12Q9NZN5 1544 aa33.02■■■□□ 2.88
ITM2C-210ENST00000620962 MLECQ14165 292 aa32.99■■■□□ 2.87
ITM2C-210ENST00000620962 CDC42BPBQ9Y5S2 1711 aa32.97■■■□□ 2.87
ITM2C-210ENST00000620962 CCDC18Q5T9S5 1454 aa32.97■■■□□ 2.87
ITM2C-210ENST00000620962 CASKIN1Q8WXD9 1431 aa32.96■■■□□ 2.87
ITM2C-210ENST00000620962 PREX2Q70Z35 1606 aa32.93■■■□□ 2.86
ITM2C-210ENST00000620962 PLPPR3Q6T4P5 718 aa32.93■■■□□ 2.86
ITM2C-210ENST00000620962 HSPA2P54652 639 aa32.92■■■□□ 2.86
ITM2C-210ENST00000620962 AFAP1Q8N556 730 aa32.91■■■□□ 2.86
ITM2C-210ENST00000620962 REREQ9P2R6 1566 aa32.9■■■□□ 2.86
ITM2C-210ENST00000620962 DIP2CQ9Y2E4 1556 aa32.88■■■□□ 2.85
ITM2C-210ENST00000620962 MLH3Q9UHC1 1453 aa32.86■■■□□ 2.85
ITM2C-210ENST00000620962 ABCC1P33527 1531 aa32.86■■■□□ 2.85
ITM2C-210ENST00000620962 PREX1Q8TCU6 1659 aa32.85■■■□□ 2.85
ITM2C-210ENST00000620962 FYCO1Q9BQS8 1478 aa32.83■■■□□ 2.85
ITM2C-210ENST00000620962 ABCA6Q8N139 1617 aa32.83■■■□□ 2.85
ITM2C-210ENST00000620962 ITSN2Q9NZM3 1697 aa32.82■■■□□ 2.84
ITM2C-210ENST00000620962 CDC42BPAQ5VT25 1732 aa32.81■■■□□ 2.84
ITM2C-210ENST00000620962 MYT1LQ9UL68 1186 aa32.79■■■□□ 2.84
ITM2C-210ENST00000620962 TRAPPC8Q9Y2L5 1435 aa32.78■■■□□ 2.84
ITM2C-210ENST00000620962 AGLP35573 1532 aa32.77■■■□□ 2.84
ITM2C-210ENST00000620962 SETD1BQ9UPS6 1966 aaKnown RBP32.76■■■□□ 2.83
ITM2C-210ENST00000620962 CEBPAP49715 358 aaPredicted RBP32.74■■■□□ 2.83
ITM2C-210ENST00000620962 KIDINS220Q9ULH0 1771 aa32.73■■■□□ 2.83
ITM2C-210ENST00000620962 C3P01024 1663 aa32.68■■■□□ 2.82
ITM2C-210ENST00000620962 UHRF1BP1Q6BDS2 1440 aa32.68■■■□□ 2.82
ITM2C-210ENST00000620962 SAMD9LQ8IVG5 1584 aa32.66■■■□□ 2.82
ITM2C-210ENST00000620962 GPATCH8Q9UKJ3 1502 aaKnown RBP32.64■■■□□ 2.82
ITM2C-210ENST00000620962 STRCQ7RTU9 1775 aa32.63■■■□□ 2.81
ITM2C-210ENST00000620962 CERKQ8TCT0 537 aa32.62■■■□□ 2.81
ITM2C-210ENST00000620962 SYCP2Q9BX26 1530 aa32.6■■■□□ 2.81
ITM2C-210ENST00000620962 CNTLNQ9NXG0 1405 aa32.59■■■□□ 2.81
ITM2C-210ENST00000620962 ESF1Q9H501 851 aaKnown RBP32.58■■■□□ 2.81
ITM2C-210ENST00000620962 DMRT2Q9Y5R5 561 aa32.58■■■□□ 2.81
ITM2C-210ENST00000620962 ZNF777Q9ULD5 760 aaPredicted RBP32.56■■■□□ 2.8
ITM2C-210ENST00000620962 KIAA1107Q9UPP5 1409 aa32.56■■■□□ 2.8
ITM2C-210ENST00000620962 PLEKHH2Q8IVE3 1493 aa32.54■■■□□ 2.8
ITM2C-210ENST00000620962 MROH2AA6NES4 1674 aa32.52■■■□□ 2.8
ITM2C-210ENST00000620962 SPAG9O60271 1321 aaKnown RBP32.51■■■□□ 2.8
ITM2C-210ENST00000620962 ATP7AQ04656 1500 aa32.5■■■□□ 2.79
ITM2C-210ENST00000620962 INO80Q9ULG1 1556 aaPredicted RBP32.49■■■□□ 2.79
ITM2C-210ENST00000620962 CCNB3Q8WWL7 1395 aa32.49■■■□□ 2.79
ITM2C-210ENST00000620962 HNRNPMP52272 730 aaKnown RBP eCLIP32.49■■■□□ 2.79
ITM2C-210ENST00000620962 CFDP1Q9UEE9 299 aaPredicted RBP32.49■■■□□ 2.79
ITM2C-210ENST00000620962 MTUS2Q5JR59 1369 aa32.47■■■□□ 2.79
ITM2C-210ENST00000620962 SUPT6HQ7KZ85 1726 aaKnown RBP32.47■■■□□ 2.79
ITM2C-210ENST00000620962 PLXNC1O60486 1568 aa32.46■■■□□ 2.79
ITM2C-210ENST00000620962 PTPRTO14522 1441 aa32.46■■■□□ 2.79
ITM2C-210ENST00000620962 NPATQ14207 1427 aa32.45■■■□□ 2.79
ITM2C-210ENST00000620962 A2MP01023 1474 aa32.41■■■□□ 2.78
ITM2C-210ENST00000620962 EHBP1L1Q8N3D4 1523 aa32.41■■■□□ 2.78
ITM2C-210ENST00000620962 TIAM1Q13009 1591 aa32.4■■■□□ 2.78
ITM2C-210ENST00000620962 ZMYM3Q14202 1370 aa32.39■■■□□ 2.78
ITM2C-210ENST00000620962 NCOA1Q15788 1441 aa32.37■■■□□ 2.77
ITM2C-210ENST00000620962 ADGBQ8N7X0 1667 aa32.37■■■□□ 2.77
ITM2C-210ENST00000620962 CLTCQ00610 1675 aaKnown RBP32.36■■■□□ 2.77
ITM2C-210ENST00000620962 CEP162Q5TB80 1403 aa32.34■■■□□ 2.77
ITM2C-210ENST00000620962 MBD5Q9P267 1494 aa32.32■■■□□ 2.76
ITM2C-210ENST00000620962 CAMSAP1Q5T5Y3 1602 aa32.3■■■□□ 2.76
ITM2C-210ENST00000620962 PPP6R1Q9UPN7 881 aa32.29■■■□□ 2.76
ITM2C-210ENST00000620962 ZNF644Q9H582 1327 aaPredicted RBP32.28■■■□□ 2.76
ITM2C-210ENST00000620962 ZNF142P52746 1687 aaPredicted RBP32.28■■■□□ 2.76
ITM2C-210ENST00000620962 RTEL1-TNFRSF6BF6WH68 1400 aa32.28■■■□□ 2.76
ITM2C-210ENST00000620962 LTBP4Q8N2S1 1624 aa32.28■■■□□ 2.76
ITM2C-210ENST00000620962 MYO3AQ8NEV4 1616 aa32.26■■■□□ 2.75
ITM2C-210ENST00000620962 PTPRKQ15262 1439 aa32.25■■■□□ 2.75
ITM2C-210ENST00000620962 GGT6Q6P531 493 aa32.24■■■□□ 2.75
ITM2C-210ENST00000620962 IQSEC2Q5JU85 1478 aa32.22■■■□□ 2.75
ITM2C-210ENST00000620962 CEP170BQ9Y4F5 1589 aaPredicted RBP32.2■■■□□ 2.75
ITM2C-210ENST00000620962 PLA2R1Q13018 1463 aa32.2■■■□□ 2.75
ITM2C-210ENST00000620962 DHX29Q7Z478 1369 aaKnown RBP32.19■■■□□ 2.74
ITM2C-210ENST00000620962 NCOA2Q15596 1464 aa32.17■■■□□ 2.74
ITM2C-210ENST00000620962 CCDC141Q6ZP82 1450 aa32.16■■■□□ 2.74
ITM2C-210ENST00000620962 CAMSAP2Q08AD1 1489 aa32.14■■■□□ 2.74
ITM2C-210ENST00000620962 PKD2Q13563 968 aa32.13■■■□□ 2.73
ITM2C-210ENST00000620962 TCOF1Q13428 1488 aaKnown RBP32.12■■■□□ 2.73
ITM2C-210ENST00000620962 NCKAP5LQ9HCH0 1330 aa32.12■■■□□ 2.73
ITM2C-210ENST00000620962 RSPH4AQ5TD94 716 aa32.12■■■□□ 2.73
ITM2C-210ENST00000620962 FAM135AQ9P2D6 1515 aa32.11■■■□□ 2.73
ITM2C-210ENST00000620962 A2ML1A8K2U0 1454 aa32.07■■■□□ 2.72
ITM2C-210ENST00000620962 ARHGEF5Q12774 1597 aa32.07■■■□□ 2.72
ITM2C-210ENST00000620962 KDM5DQ9BY66 1539 aa32.05■■■□□ 2.72
ITM2C-210ENST00000620962 DNMT1P26358 1616 aaKnown RBP32.04■■■□□ 2.72
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms