RNA–Protein interactions for RNA: ENST00000620578.4

COPS7B-224, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 2 BASIC

Gene COPS7B, Length 2,500 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-224ENST00000620578 TCOF1Q13428 1488 aaKnown RBP22.68■■□□□ 1.22
COPS7B-224ENST00000620578 ASXL2Q76L83 1435 aa22.68■■□□□ 1.22
COPS7B-224ENST00000620578 CAMSAP2Q08AD1 1489 aa22.66■■□□□ 1.22
COPS7B-224ENST00000620578 SETD5Q9C0A6 1442 aa22.64■■□□□ 1.21
COPS7B-224ENST00000620578 ABCC5O15440 1437 aa22.63■■□□□ 1.21
COPS7B-224ENST00000620578 WDR7Q9Y4E6 1490 aa22.62■■□□□ 1.21
COPS7B-224ENST00000620578 CDC42BPBQ9Y5S2 1711 aa22.6■■□□□ 1.21
COPS7B-224ENST00000620578 DAPK1P53355 1430 aa22.6■■□□□ 1.21
COPS7B-224ENST00000620578 ITSN2Q9NZM3 1697 aa22.58■■□□□ 1.2
COPS7B-224ENST00000620578 ARHGAP5Q13017 1502 aa22.57■■□□□ 1.2
COPS7B-224ENST00000620578 DHX57Q6P158 1386 aaKnown RBP22.57■■□□□ 1.2
COPS7B-224ENST00000620578 NAIPQ13075 1403 aa22.56■■□□□ 1.2
COPS7B-224ENST00000620578 SAMD9LQ8IVG5 1584 aa22.53■■□□□ 1.2
COPS7B-224ENST00000620578 PREX2Q70Z35 1606 aa22.52■■□□□ 1.2
COPS7B-224ENST00000620578 HFM1A2PYH4 1435 aa22.52■■□□□ 1.2
COPS7B-224ENST00000620578 PLCH2O75038 1416 aa22.52■■□□□ 1.2
COPS7B-224ENST00000620578 KDM6BO15054 1643 aa22.51■■□□□ 1.19
COPS7B-224ENST00000620578 DNMT1P26358 1616 aaKnown RBP22.51■■□□□ 1.19
COPS7B-224ENST00000620578 EFCAB2Q5VUJ9 269 aa22.5■■□□□ 1.19
COPS7B-224ENST00000620578 MBD5Q9P267 1494 aa22.49■■□□□ 1.19
COPS7B-224ENST00000620578 ARHGEF12Q9NZN5 1544 aa22.49■■□□□ 1.19
COPS7B-224ENST00000620578 MYO5CQ9NQX4 1742 aa22.49■■□□□ 1.19
COPS7B-224ENST00000620578 SYCP2Q9BX26 1530 aa22.48■■□□□ 1.19
COPS7B-224ENST00000620578 AFAP1Q8N556 730 aa22.48■■□□□ 1.19
COPS7B-224ENST00000620578 TSPY4P0CV99 314 aa22.47■■□□□ 1.19
COPS7B-224ENST00000620578 TSPY10P0CW01 314 aa22.47■■□□□ 1.19
COPS7B-224ENST00000620578 AKNAQ7Z591 1439 aa22.46■■□□□ 1.19
COPS7B-224ENST00000620578 TRIM52Q96A61 297 aa22.46■■□□□ 1.19
COPS7B-224ENST00000620578 ZEB1P37275 1124 aaPredicted RBP22.43■■□□□ 1.18
COPS7B-224ENST00000620578 NCOA1Q15788 1441 aa22.43■■□□□ 1.18
COPS7B-224ENST00000620578 TRAPPC8Q9Y2L5 1435 aa22.42■■□□□ 1.18
COPS7B-224ENST00000620578 C9orf84Q5VXU9 1444 aa22.41■■□□□ 1.18
COPS7B-224ENST00000620578 FAM69CQ0P6D2 419 aa22.4■■□□□ 1.18
COPS7B-224ENST00000620578 ABCA9Q8IUA7 1624 aa22.4■■□□□ 1.18
COPS7B-224ENST00000620578 FANCAO15360 1455 aa22.4■■□□□ 1.18
COPS7B-224ENST00000620578 CD109Q6YHK3 1445 aa22.4■■□□□ 1.18
COPS7B-224ENST00000620578 SIN3AQ96ST3 1273 aa22.4■■□□□ 1.18
COPS7B-224ENST00000620578 FOXD1Q16676 465 aa22.39■■□□□ 1.18
COPS7B-224ENST00000620578 ROCK1Q13464 1354 aa22.37■■□□□ 1.17
COPS7B-224ENST00000620578 CCDC141Q6ZP82 1450 aa22.36■■□□□ 1.17
COPS7B-224ENST00000620578 NEUROD1Q13562 356 aa22.36■■□□□ 1.17
COPS7B-224ENST00000620578 ANKRD30AQ9BXX3 1397 aa22.35■■□□□ 1.17
COPS7B-224ENST00000620578 MAPKBP1O60336 1514 aa22.35■■□□□ 1.17
COPS7B-224ENST00000620578 CROCC2H7BZ55 1655 aa22.34■■□□□ 1.17
COPS7B-224ENST00000620578 MYT1LQ9UL68 1186 aa22.33■■□□□ 1.17
COPS7B-224ENST00000620578 SCAPERQ9BY12 1400 aa22.33■■□□□ 1.17
COPS7B-224ENST00000620578 KIF15Q9NS87 1388 aa22.32■■□□□ 1.16
COPS7B-224ENST00000620578 KIAA1107Q9UPP5 1409 aa22.32■■□□□ 1.16
COPS7B-224ENST00000620578 GCC2Q8IWJ2 1684 aa22.32■■□□□ 1.16
COPS7B-224ENST00000620578 ABCC1P33527 1531 aa22.32■■□□□ 1.16
COPS7B-224ENST00000620578 ARHGEF5Q12774 1597 aa22.31■■□□□ 1.16
COPS7B-224ENST00000620578 ADGRL1O94910 1474 aa22.3■■□□□ 1.16
COPS7B-224ENST00000620578 RAPGEF3O95398 923 aa22.3■■□□□ 1.16
COPS7B-224ENST00000620578 RSPH4AQ5TD94 716 aa22.3■■□□□ 1.16
COPS7B-224ENST00000620578 ANKRD50Q9ULJ7 1429 aa22.29■■□□□ 1.16
COPS7B-224ENST00000620578 ADGRL2O95490 1459 aa22.29■■□□□ 1.16
COPS7B-224ENST00000620578 MPHOSPH9Q99550 1183 aa22.28■■□□□ 1.16
COPS7B-224ENST00000620578 SPAG9O60271 1321 aaKnown RBP22.27■■□□□ 1.16
COPS7B-224ENST00000620578 DENND4BO75064 1496 aaPredicted RBP22.27■■□□□ 1.16
COPS7B-224ENST00000620578 PLEKHH2Q8IVE3 1493 aa22.26■■□□□ 1.15
COPS7B-224ENST00000620578 ADGBQ8N7X0 1667 aa22.26■■□□□ 1.15
COPS7B-224ENST00000620578 SHANK2Q9UPX8 1470 aa22.26■■□□□ 1.15
COPS7B-224ENST00000620578 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.25■■□□□ 1.156e-8■■□□□ 11.8
COPS7B-224ENST00000620578 SLC4A1APQ9BWU0 796 aaKnown RBP22.24■■□□□ 1.15
COPS7B-224ENST00000620578 TSPOAP1O95153 1857 aa22.24■■□□□ 1.15
COPS7B-224ENST00000620578 ARAP3Q8WWN8 1544 aa22.24■■□□□ 1.15
COPS7B-224ENST00000620578 DIP2BQ9P265 1576 aa22.2■■□□□ 1.15
COPS7B-224ENST00000620578 CLSPNQ9HAW4 1339 aa22.19■■□□□ 1.14
COPS7B-224ENST00000620578 NUP155O75694 1391 aa22.19■■□□□ 1.14
COPS7B-224ENST00000620578 DNAJC5Q9H3Z4 198 aa22.16■■□□□ 1.14
COPS7B-224ENST00000620578 MAP3K4Q9Y6R4 1608 aa22.16■■□□□ 1.14
COPS7B-224ENST00000620578 PZPP20742 1482 aa22.15■■□□□ 1.14
COPS7B-224ENST00000620578 PKD2Q13563 968 aa22.15■■□□□ 1.14
COPS7B-224ENST00000620578 MAST1Q9Y2H9 1570 aa22.13■■□□□ 1.13
COPS7B-224ENST00000620578 ZFYVE16Q7Z3T8 1539 aa22.12■■□□□ 1.13
COPS7B-224ENST00000620578 GLI2P10070 1586 aa22.11■■□□□ 1.13
COPS7B-224ENST00000620578 POGZQ7Z3K3 1410 aa22.09■■□□□ 1.13
COPS7B-224ENST00000620578 ATP7AQ04656 1500 aa22.09■■□□□ 1.13
COPS7B-224ENST00000620578 TRHP20396 242 aaPredicted RBP22.09■■□□□ 1.13
COPS7B-224ENST00000620578 KIF3BO15066 747 aa22.09■■□□□ 1.13
COPS7B-224ENST00000620578 ZNF518AQ6AHZ1 1483 aa22.08■■□□□ 1.13
COPS7B-224ENST00000620578 KIF13AQ9H1H9 1805 aa22.08■■□□□ 1.13
COPS7B-224ENST00000620578 PLXNC1O60486 1568 aa22.07■■□□□ 1.12
COPS7B-224ENST00000620578 NEO1Q92859 1461 aa22.06■■□□□ 1.12
COPS7B-224ENST00000620578 RTEL1-TNFRSF6BF6WH68 1400 aa22.06■■□□□ 1.12
COPS7B-224ENST00000620578 PPRC1Q5VV67 1664 aaKnown RBP22.06■■□□□ 1.12
COPS7B-224ENST00000620578 KIDINS220Q9ULH0 1771 aa22.06■■□□□ 1.12
COPS7B-224ENST00000620578 DUOX2Q9NRD8 1548 aa22.05■■□□□ 1.12
COPS7B-224ENST00000620578 INO80Q9ULG1 1556 aaPredicted RBP22.04■■□□□ 1.12
COPS7B-224ENST00000620578 ANKRD30BQ9BXX2 1392 aa22.03■■□□□ 1.12
COPS7B-224ENST00000620578 COL17A1Q9UMD9 1497 aaPredicted RBP22.03■■□□□ 1.12
COPS7B-224ENST00000620578 YEATS2Q9ULM3 1422 aa22.02■■□□□ 1.11
COPS7B-224ENST00000620578 CFAP74Q9C0B2 1584 aa22■■□□□ 1.11
COPS7B-224ENST00000620578 DHX29Q7Z478 1369 aaKnown RBP22■■□□□ 1.11
COPS7B-224ENST00000620578 GGT6Q6P531 493 aa22■■□□□ 1.11
COPS7B-224ENST00000620578 ERBINQ96RT1 1412 aa21.98■■□□□ 1.11
COPS7B-224ENST00000620578 KDM5CP41229 1560 aa21.98■■□□□ 1.11
COPS7B-224ENST00000620578 FAM135AQ9P2D6 1515 aa21.98■■□□□ 1.11
COPS7B-224ENST00000620578 TONSLQ96HA7 1378 aa21.97■■□□□ 1.11
COPS7B-224ENST00000620578 RICTORQ6R327 1708 aa21.96■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms