RNA–Protein interactions for RNA: ENST00000620021.4

TMCO3-210, Transcript of transmembrane and coiled-coil domains 3, humanhuman

TSL 4

Gene TMCO3, Length 3,542 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMCO3-210ENST00000620021 ABCC5O15440 1437 aa18.88■□□□□ 0.61
TMCO3-210ENST00000620021 GPATCH8Q9UKJ3 1502 aaKnown RBP18.88■□□□□ 0.61
TMCO3-210ENST00000620021 DAPK1P53355 1430 aa18.87■□□□□ 0.61
TMCO3-210ENST00000620021 UACAQ9BZF9 1416 aa18.87■□□□□ 0.61
TMCO3-210ENST00000620021 YTHDC1Q96MU7 727 aaKnown RBP18.85■□□□□ 0.61
TMCO3-210ENST00000620021 HNRNPMP52272 730 aaKnown RBP eCLIP18.83■□□□□ 0.6
TMCO3-210ENST00000620021 CAMSAP2Q08AD1 1489 aa18.82■□□□□ 0.6
TMCO3-210ENST00000620021 MPHOSPH9Q99550 1183 aa18.82■□□□□ 0.6
TMCO3-210ENST00000620021 PPP1R15AO75807 674 aaPredicted RBP18.79■□□□□ 0.6
TMCO3-210ENST00000620021 TONSLQ96HA7 1378 aa18.79■□□□□ 0.6
TMCO3-210ENST00000620021 DENND4BO75064 1496 aaPredicted RBP18.76■□□□□ 0.59
TMCO3-210ENST00000620021 SLC4A1APQ9BWU0 796 aaKnown RBP18.75■□□□□ 0.59
TMCO3-210ENST00000620021 DNMT1P26358 1616 aaKnown RBP18.75■□□□□ 0.59
TMCO3-210ENST00000620021 ABCC10Q5T3U5 1492 aa18.74■□□□□ 0.59
TMCO3-210ENST00000620021 SHROOM2Q13796 1616 aa18.74■□□□□ 0.59
TMCO3-210ENST00000620021 AKNAQ7Z591 1439 aa18.73■□□□□ 0.59
TMCO3-210ENST00000620021 GCC2Q8IWJ2 1684 aa18.72■□□□□ 0.59
TMCO3-210ENST00000620021 CDC42BPAQ5VT25 1732 aa18.71■□□□□ 0.59
TMCO3-210ENST00000620021 NCOA1Q15788 1441 aa18.71■□□□□ 0.59
TMCO3-210ENST00000620021 TSPY4P0CV99 314 aa18.71■□□□□ 0.59
TMCO3-210ENST00000620021 TSPY10P0CW01 314 aa18.71■□□□□ 0.59
TMCO3-210ENST00000620021 ROCK1Q13464 1354 aa18.71■□□□□ 0.58
TMCO3-210ENST00000620021 ADCY10Q96PN6 1610 aa18.7■□□□□ 0.58
TMCO3-210ENST00000620021 ITSN2Q9NZM3 1697 aa18.69■□□□□ 0.58
TMCO3-210ENST00000620021 CLASP1Q7Z460 1538 aa18.69■□□□□ 0.58
TMCO3-210ENST00000620021 DDX10Q13206 875 aaKnown RBP18.68■□□□□ 0.58
TMCO3-210ENST00000620021 TIMELESSQ9UNS1 1208 aa18.67■□□□□ 0.58
TMCO3-210ENST00000620021 ERICH6Q7L0X2 663 aa18.66■□□□□ 0.58
TMCO3-210ENST00000620021 ABCC2Q92887 1545 aa18.66■□□□□ 0.58
TMCO3-210ENST00000620021 ANKRD30AQ9BXX3 1397 aa18.65■□□□□ 0.58
TMCO3-210ENST00000620021 L3MBTL2Q969R5 705 aa18.65■□□□□ 0.58
TMCO3-210ENST00000620021 C9orf84Q5VXU9 1444 aa18.63■□□□□ 0.57
TMCO3-210ENST00000620021 PKD2Q13563 968 aa18.62■□□□□ 0.57
TMCO3-210ENST00000620021 TTC37Q6PGP7 1564 aa18.62■□□□□ 0.57
TMCO3-210ENST00000620021 ANKRD50Q9ULJ7 1429 aa18.62■□□□□ 0.57
TMCO3-210ENST00000620021 OSCARQ8IYS5 282 aa18.61■□□□□ 0.57
TMCO3-210ENST00000620021 ARHGAP5Q13017 1502 aa18.6■□□□□ 0.57
TMCO3-210ENST00000620021 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.6■□□□□ 0.57
TMCO3-210ENST00000620021 SLC24A1O60721 1099 aa18.6■□□□□ 0.57
TMCO3-210ENST00000620021 CDC42BPBQ9Y5S2 1711 aa18.59■□□□□ 0.57
TMCO3-210ENST00000620021 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.59■□□□□ 0.57
TMCO3-210ENST00000620021 NUP155O75694 1391 aa18.58■□□□□ 0.57
TMCO3-210ENST00000620021 ANKRD30BQ9BXX2 1392 aa18.58■□□□□ 0.57
TMCO3-210ENST00000620021 SCAF1Q9H7N4 1312 aaKnown RBP18.58■□□□□ 0.57
TMCO3-210ENST00000620021 MBD5Q9P267 1494 aa18.58■□□□□ 0.57
TMCO3-210ENST00000620021 KIF15Q9NS87 1388 aa18.58■□□□□ 0.57
TMCO3-210ENST00000620021 SAMD9LQ8IVG5 1584 aa18.58■□□□□ 0.56
TMCO3-210ENST00000620021 ACIN1Q9UKV3 1341 aaKnown RBP18.57■□□□□ 0.56
TMCO3-210ENST00000620021 ZNF326Q5BKZ1 582 aaKnown RBP18.56■□□□□ 0.56
TMCO3-210ENST00000620021 BCL11AQ9H165 835 aa18.56■□□□□ 0.56
TMCO3-210ENST00000620021 PZPP20742 1482 aa18.56■□□□□ 0.56
TMCO3-210ENST00000620021 ZCCHC11Q5TAX3 1644 aaKnown RBP18.55■□□□□ 0.56
TMCO3-210ENST00000620021 SYCP2Q9BX26 1530 aa18.55■□□□□ 0.56
TMCO3-210ENST00000620021 KDM5BQ9UGL1 1544 aa18.55■□□□□ 0.56
TMCO3-210ENST00000620021 ADGRL2O95490 1459 aa18.54■□□□□ 0.56
TMCO3-210ENST00000620021 CROCC2H7BZ55 1655 aa18.54■□□□□ 0.56
TMCO3-210ENST00000620021 NBPF8Q3BBV2 869 aa18.53■□□□□ 0.56
TMCO3-210ENST00000620021 CENPBP07199 599 aaPredicted RBP18.53■□□□□ 0.56
TMCO3-210ENST00000620021 ADGBQ8N7X0 1667 aa18.52■□□□□ 0.56
TMCO3-210ENST00000620021 PREX2Q70Z35 1606 aa18.52■□□□□ 0.55
TMCO3-210ENST00000620021 AFAP1Q8N556 730 aa18.52■□□□□ 0.55
TMCO3-210ENST00000620021 CCDC141Q6ZP82 1450 aa18.51■□□□□ 0.55
TMCO3-210ENST00000620021 EFCAB2Q5VUJ9 269 aa18.5■□□□□ 0.55
TMCO3-210ENST00000620021 HSPA5P11021 654 aaKnown RBP18.49■□□□□ 0.55
TMCO3-210ENST00000620021 ARHGEF12Q9NZN5 1544 aa18.49■□□□□ 0.55
TMCO3-210ENST00000620021 MYT1LQ9UL68 1186 aa18.48■□□□□ 0.55
TMCO3-210ENST00000620021 UHRF1BP1LA0JNW5 1464 aa18.47■□□□□ 0.55
TMCO3-210ENST00000620021 RPRD2Q5VT52 1461 aaKnown RBP18.47■□□□□ 0.55
TMCO3-210ENST00000620021 KDM2AQ9Y2K7 1162 aa18.46■□□□□ 0.55
TMCO3-210ENST00000620021 PLCH2O75038 1416 aa18.46■□□□□ 0.55
TMCO3-210ENST00000620021 SHANK2Q9UPX8 1470 aa18.46■□□□□ 0.55
TMCO3-210ENST00000620021 KIAA1107Q9UPP5 1409 aa18.46■□□□□ 0.55
TMCO3-210ENST00000620021 RSPH4AQ5TD94 716 aa18.45■□□□□ 0.54
TMCO3-210ENST00000620021 TRAPPC8Q9Y2L5 1435 aa18.44■□□□□ 0.54
TMCO3-210ENST00000620021 MYO5CQ9NQX4 1742 aa18.44■□□□□ 0.54
TMCO3-210ENST00000620021 ARHGEF5Q12774 1597 aa18.44■□□□□ 0.54
TMCO3-210ENST00000620021 NPM1P06748 294 aaKnown RBP eCLIP18.42■□□□□ 0.54
TMCO3-210ENST00000620021 GTF3C3Q9Y5Q9 886 aa18.42■□□□□ 0.54
TMCO3-210ENST00000620021 PLEKHH2Q8IVE3 1493 aa18.42■□□□□ 0.54
TMCO3-210ENST00000620021 EIF4G2P78344 907 aaKnown RBP eCLIP18.41■□□□□ 0.54
TMCO3-210ENST00000620021 C11orf95C9JLR9 678 aaPredicted RBP18.4■□□□□ 0.54
TMCO3-210ENST00000620021 RGL3Q3MIN7 710 aa18.4■□□□□ 0.54
TMCO3-210ENST00000620021 TEX14Q8IWB6 1497 aa18.4■□□□□ 0.54
TMCO3-210ENST00000620021 ASXL2Q76L83 1435 aa18.4■□□□□ 0.54
TMCO3-210ENST00000620021 WDR7Q9Y4E6 1490 aa18.39■□□□□ 0.54
TMCO3-210ENST00000620021 SPAG9O60271 1321 aaKnown RBP18.38■□□□□ 0.53
TMCO3-210ENST00000620021 WASHC2AQ641Q2 1341 aa18.38■□□□□ 0.53
TMCO3-210ENST00000620021 CYB5RLQ6IPT4 315 aa18.36■□□□□ 0.53
TMCO3-210ENST00000620021 DCAF11Q8TEB1 546 aa18.36■□□□□ 0.53
TMCO3-210ENST00000620021 POLR3GLQ9BT43 218 aa18.36■□□□□ 0.53
TMCO3-210ENST00000620021 CNGB1Q14028 1251 aaPredicted RBP18.35■□□□□ 0.53
TMCO3-210ENST00000620021 FAM135AQ9P2D6 1515 aa18.33■□□□□ 0.52
TMCO3-210ENST00000620021 FANCAO15360 1455 aa18.32■□□□□ 0.52
TMCO3-210ENST00000620021 ANP32CO43423 234 aa18.32■□□□□ 0.52
TMCO3-210ENST00000620021 ABCC1P33527 1531 aa18.31■□□□□ 0.52
TMCO3-210ENST00000620021 SCAPERQ9BY12 1400 aa18.3■□□□□ 0.52
TMCO3-210ENST00000620021 KIF3BO15066 747 aa18.27■□□□□ 0.52
TMCO3-210ENST00000620021 ADGRL1O94910 1474 aa18.26■□□□□ 0.51
TMCO3-210ENST00000620021 MAST1Q9Y2H9 1570 aa18.25■□□□□ 0.51
TMCO3-210ENST00000620021 KDM5DQ9BY66 1539 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms