RNA–Protein interactions for RNA: ENST00000619601.1

GAPDH-211, Transcript of glyceraldehyde-3-phosphate dehydrogenase, humanhuman

TSL 5 BASIC

Gene GAPDH, Length 1,086 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Exosome, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDH-211ENST00000619601 PLCH2O75038 1416 aa17.69■□□□□ 0.42
GAPDH-211ENST00000619601 ARID4BQ4LE39 1312 aaPredicted RBP17.69■□□□□ 0.42
GAPDH-211ENST00000619601 MYO5CQ9NQX4 1742 aa17.67■□□□□ 0.42
GAPDH-211ENST00000619601 ZMYM4Q5VZL5 1548 aa17.64■□□□□ 0.41
GAPDH-211ENST00000619601 EFCAB2Q5VUJ9 269 aa17.64■□□□□ 0.41
GAPDH-211ENST00000619601 RIMS1Q86UR5 1692 aaKnown RBP17.64■□□□□ 0.41
GAPDH-211ENST00000619601 SIGLEC1Q9BZZ2 1709 aa17.62■□□□□ 0.41
GAPDH-211ENST00000619601 CEP162Q5TB80 1403 aa17.62■□□□□ 0.41
GAPDH-211ENST00000619601 YEATS2Q9ULM3 1422 aa17.61■□□□□ 0.41
GAPDH-211ENST00000619601 ZFYVE16Q7Z3T8 1539 aa17.6■□□□□ 0.41
GAPDH-211ENST00000619601 ARHGAP5Q13017 1502 aa17.59■□□□□ 0.41
GAPDH-211ENST00000619601 MAGI2Q86UL8 1455 aa17.59■□□□□ 0.41
GAPDH-211ENST00000619601 SCAPERQ9BY12 1400 aa17.59■□□□□ 0.41
GAPDH-211ENST00000619601 POGZQ7Z3K3 1410 aa17.57■□□□□ 0.4
GAPDH-211ENST00000619601 LMTK3Q96Q04 1460 aa17.56■□□□□ 0.4
GAPDH-211ENST00000619601 PREX2Q70Z35 1606 aa17.55■□□□□ 0.4
GAPDH-211ENST00000619601 CDC42BPBQ9Y5S2 1711 aa17.54■□□□□ 0.4
GAPDH-211ENST00000619601 ZNF518AQ6AHZ1 1483 aa17.53■□□□□ 0.4
GAPDH-211ENST00000619601 FER1L4A9Z1Z3 1794 aa17.53■□□□□ 0.4
GAPDH-211ENST00000619601 PLPPR3Q6T4P5 718 aa17.52■□□□□ 0.4
GAPDH-211ENST00000619601 MTUS2Q5JR59 1369 aa17.52■□□□□ 0.39
GAPDH-211ENST00000619601 MLECQ14165 292 aa17.51■□□□□ 0.39
GAPDH-211ENST00000619601 CDC42BPAQ5VT25 1732 aa17.5■□□□□ 0.39
GAPDH-211ENST00000619601 LOC105371045A0A1W2PR82 267 aa17.5■□□□□ 0.39
GAPDH-211ENST00000619601 ATP10AO60312 1499 aa17.5■□□□□ 0.39
GAPDH-211ENST00000619601 KDM5CP41229 1560 aa17.48■□□□□ 0.39
GAPDH-211ENST00000619601 C9orf84Q5VXU9 1444 aa17.47■□□□□ 0.39
GAPDH-211ENST00000619601 EHBP1L1Q8N3D4 1523 aa17.47■□□□□ 0.39
GAPDH-211ENST00000619601 FBXO41Q8TF61 875 aa17.47■□□□□ 0.39
GAPDH-211ENST00000619601 ABCC1P33527 1531 aa17.47■□□□□ 0.39
GAPDH-211ENST00000619601 ARHGEF12Q9NZN5 1544 aa17.47■□□□□ 0.39
GAPDH-211ENST00000619601 GPATCH8Q9UKJ3 1502 aaKnown RBP17.47■□□□□ 0.39
GAPDH-211ENST00000619601 CCNB3Q8WWL7 1395 aa17.46■□□□□ 0.39
GAPDH-211ENST00000619601 HSPA2P54652 639 aa17.46■□□□□ 0.39
GAPDH-211ENST00000619601 AFAP1Q8N556 730 aa17.45■□□□□ 0.38
GAPDH-211ENST00000619601 ITSN2Q9NZM3 1697 aa17.44■□□□□ 0.38
GAPDH-211ENST00000619601 VPS8Q8N3P4 1428 aa17.44■□□□□ 0.38
GAPDH-211ENST00000619601 MYT1LQ9UL68 1186 aa17.43■□□□□ 0.38
GAPDH-211ENST00000619601 PLEKHH2Q8IVE3 1493 aa17.43■□□□□ 0.38
GAPDH-211ENST00000619601 MLH3Q9UHC1 1453 aa17.43■□□□□ 0.38
GAPDH-211ENST00000619601 CFDP1Q9UEE9 299 aaPredicted RBP17.42■□□□□ 0.38
GAPDH-211ENST00000619601 ZNF777Q9ULD5 760 aaPredicted RBP17.41■□□□□ 0.38
GAPDH-211ENST00000619601 DIP2CQ9Y2E4 1556 aa17.4■□□□□ 0.38
GAPDH-211ENST00000619601 TRAPPC8Q9Y2L5 1435 aa17.4■□□□□ 0.38
GAPDH-211ENST00000619601 SAMD9LQ8IVG5 1584 aa17.4■□□□□ 0.38
GAPDH-211ENST00000619601 KIAA1107Q9UPP5 1409 aa17.39■□□□□ 0.38
GAPDH-211ENST00000619601 TIAM1Q13009 1591 aa17.39■□□□□ 0.37
GAPDH-211ENST00000619601 ABCA6Q8N139 1617 aa17.39■□□□□ 0.37
GAPDH-211ENST00000619601 PREX1Q8TCU6 1659 aa17.39■□□□□ 0.37
GAPDH-211ENST00000619601 REREQ9P2R6 1566 aa17.38■□□□□ 0.37
GAPDH-211ENST00000619601 CEBPAP49715 358 aaPredicted RBP17.38■□□□□ 0.37
GAPDH-211ENST00000619601 SUPT6HQ7KZ85 1726 aaKnown RBP17.38■□□□□ 0.37
GAPDH-211ENST00000619601 SYCP2Q9BX26 1530 aa17.37■□□□□ 0.37
GAPDH-211ENST00000619601 MAP3K1Q13233 1512 aa17.36■□□□□ 0.37
GAPDH-211ENST00000619601 SPAG9O60271 1321 aaKnown RBP17.34■□□□□ 0.37
GAPDH-211ENST00000619601 KIDINS220Q9ULH0 1771 aa17.34■□□□□ 0.37
GAPDH-211ENST00000619601 NCOA2Q15596 1464 aa17.33■□□□□ 0.37
GAPDH-211ENST00000619601 HNRNPMP52272 730 aaKnown RBP eCLIP17.33■□□□□ 0.36
GAPDH-211ENST00000619601 LRRC9Q6ZRR7 1453 aa17.32■□□□□ 0.36
GAPDH-211ENST00000619601 SETD1BQ9UPS6 1966 aaKnown RBP17.32■□□□□ 0.36
GAPDH-211ENST00000619601 C3P01024 1663 aa17.32■□□□□ 0.36
GAPDH-211ENST00000619601 AGLP35573 1532 aa17.31■□□□□ 0.36
GAPDH-211ENST00000619601 STRCQ7RTU9 1775 aa17.3■□□□□ 0.36
GAPDH-211ENST00000619601 ATP7AQ04656 1500 aa17.29■□□□□ 0.36
GAPDH-211ENST00000619601 UHRF1BP1Q6BDS2 1440 aa17.28■□□□□ 0.36
GAPDH-211ENST00000619601 INO80Q9ULG1 1556 aaPredicted RBP17.28■□□□□ 0.36
GAPDH-211ENST00000619601 APLP2Q06481 763 aa17.27■□□□□ 0.36
GAPDH-211ENST00000619601 RSPH4AQ5TD94 716 aa17.27■□□□□ 0.36
GAPDH-211ENST00000619601 CERKQ8TCT0 537 aa17.27■□□□□ 0.36
GAPDH-211ENST00000619601 ZNF644Q9H582 1327 aaPredicted RBP17.26■□□□□ 0.35
GAPDH-211ENST00000619601 MBD5Q9P267 1494 aa17.26■□□□□ 0.35
GAPDH-211ENST00000619601 ESF1Q9H501 851 aaKnown RBP17.25■□□□□ 0.35
GAPDH-211ENST00000619601 CAMSAP2Q08AD1 1489 aa17.24■□□□□ 0.35
GAPDH-211ENST00000619601 RTEL1-TNFRSF6BF6WH68 1400 aa17.24■□□□□ 0.35
GAPDH-211ENST00000619601 A2MP01023 1474 aa17.22■□□□□ 0.35
GAPDH-211ENST00000619601 CCDC141Q6ZP82 1450 aa17.22■□□□□ 0.35
GAPDH-211ENST00000619601 ADGBQ8N7X0 1667 aa17.22■□□□□ 0.35
GAPDH-211ENST00000619601 CNTLNQ9NXG0 1405 aa17.21■□□□□ 0.35
GAPDH-211ENST00000619601 PLXNC1O60486 1568 aa17.21■□□□□ 0.35
GAPDH-211ENST00000619601 KANK4Q5T7N3 995 aaPredicted RBP17.21■□□□□ 0.35
GAPDH-211ENST00000619601 DMRT2Q9Y5R5 561 aa17.21■□□□□ 0.35
GAPDH-211ENST00000619601 MROH2AA6NES4 1674 aa17.2■□□□□ 0.34
GAPDH-211ENST00000619601 ARHGEF5Q12774 1597 aa17.2■□□□□ 0.34
GAPDH-211ENST00000619601 MIA2Q96PC5 1412 aa17.2■□□□□ 0.34
GAPDH-211ENST00000619601 MYOM3Q5VTT5 1437 aa17.19■□□□□ 0.34
GAPDH-211ENST00000619601 TSPY4P0CV99 314 aa17.17■□□□□ 0.34
GAPDH-211ENST00000619601 TSPY10P0CW01 314 aa17.17■□□□□ 0.34
GAPDH-211ENST00000619601 PPP6R1Q9UPN7 881 aa17.16■□□□□ 0.34
GAPDH-211ENST00000619601 CLTCQ00610 1675 aaKnown RBP17.16■□□□□ 0.34
GAPDH-211ENST00000619601 PTPRTO14522 1441 aa17.15■□□□□ 0.34
GAPDH-211ENST00000619601 ZMYM3Q14202 1370 aa17.15■□□□□ 0.34
GAPDH-211ENST00000619601 DHX29Q7Z478 1369 aaKnown RBP17.15■□□□□ 0.34
GAPDH-211ENST00000619601 NPATQ14207 1427 aa17.13■□□□□ 0.33
GAPDH-211ENST00000619601 NCOA1Q15788 1441 aa17.12■□□□□ 0.33
GAPDH-211ENST00000619601 MAST1Q9Y2H9 1570 aa17.11■□□□□ 0.33
GAPDH-211ENST00000619601 GGT6Q6P531 493 aa17.11■□□□□ 0.33
GAPDH-211ENST00000619601 CAMSAP1Q5T5Y3 1602 aa17.1■□□□□ 0.33
GAPDH-211ENST00000619601 LTBP4Q8N2S1 1624 aa17.08■□□□□ 0.32
GAPDH-211ENST00000619601 FAM135AQ9P2D6 1515 aa17.08■□□□□ 0.32
GAPDH-211ENST00000619601 ZNF142P52746 1687 aaPredicted RBP17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms