RNA–Protein interactions for RNA: ENST00000619601.1

GAPDH-211, Transcript of glyceraldehyde-3-phosphate dehydrogenase, humanhuman

TSL 5 BASIC

Gene GAPDH, Length 1,086 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Exosome, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDH-211ENST00000619601 NISCHQ9Y2I1 1504 aa26.95■■□□□ 1.91
GAPDH-211ENST00000619601 ABCC9O60706 1549 aa24.14■■□□□ 1.45
GAPDH-211ENST00000619601 CCDC180Q9P1Z9 1646 aa24.1■■□□□ 1.45
GAPDH-211ENST00000619601 RB1CC1Q8TDY2 1594 aa22.95■■□□□ 1.26
GAPDH-211ENST00000619601 NACADO15069 1562 aa22.77■■□□□ 1.24
GAPDH-211ENST00000619601 DNAJC5BQ9UF47 199 aa22.72■■□□□ 1.23
GAPDH-211ENST00000619601 DCAF8L2P0C7V8 631 aa22.64■■□□□ 1.21
GAPDH-211ENST00000619601 MYO15BQ96JP2 1530 aa22.53■■□□□ 1.2
GAPDH-211ENST00000619601 UNC13AQ9UPW8 1703 aa22.51■■□□□ 1.19
GAPDH-211ENST00000619601 PABPN1Q86U42 306 aaKnown RBP eCLIP22.46■■□□□ 1.19
GAPDH-211ENST00000619601 ZCCHC6Q5VYS8 1495 aaKnown RBP22.4■■□□□ 1.18
GAPDH-211ENST00000619601 DCAF1Q9Y4B6 1507 aa22.34■■□□□ 1.17
GAPDH-211ENST00000619601 BICRAQ9NZM4 1560 aa22.31■■□□□ 1.16
GAPDH-211ENST00000619601 SCRIBQ14160 1630 aa21.95■■□□□ 1.1
GAPDH-211ENST00000619601 SHROOM4Q9ULL8 1493 aa21.94■■□□□ 1.1
GAPDH-211ENST00000619601 CC2D2AQ9P2K1 1620 aa21.82■■□□□ 1.08
GAPDH-211ENST00000619601 EIF4G1Q04637 1599 aaKnown RBP21.74■■□□□ 1.07
GAPDH-211ENST00000619601 CECR2Q9BXF3 1484 aa21.74■■□□□ 1.07
GAPDH-211ENST00000619601 NCAPD3P42695 1498 aa21.01■□□□□ 0.95
GAPDH-211ENST00000619601 SMARCA4P51532 1647 aa20.96■□□□□ 0.95
GAPDH-211ENST00000619601 ATAD2BQ9ULI0 1458 aa20.94■□□□□ 0.94
GAPDH-211ENST00000619601 BAZ1AQ9NRL2 1556 aaPredicted RBP20.93■□□□□ 0.94
GAPDH-211ENST00000619601 SMARCA2P51531 1590 aa20.9■□□□□ 0.94
GAPDH-211ENST00000619601 DNAJC5Q9H3Z4 198 aa20.87■□□□□ 0.93
GAPDH-211ENST00000619601 HMGXB3Q12766 1538 aa20.86■□□□□ 0.93
GAPDH-211ENST00000619601 ERCC6Q03468 1493 aa20.82■□□□□ 0.92
GAPDH-211ENST00000619601 CUX2O14529 1486 aa20.81■□□□□ 0.92
GAPDH-211ENST00000619601 PEG3Q9GZU2 1588 aa20.79■□□□□ 0.92
GAPDH-211ENST00000619601 BAZ1BQ9UIG0 1483 aaKnown RBP20.74■□□□□ 0.91
GAPDH-211ENST00000619601 MROH2BQ7Z745 1585 aa20.73■□□□□ 0.91
GAPDH-211ENST00000619601 NESP48681 1621 aa20.73■□□□□ 0.91
GAPDH-211ENST00000619601 LAMC3Q9Y6N6 1575 aa20.57■□□□□ 0.88
GAPDH-211ENST00000619601 THOC2Q8NI27 1593 aaKnown RBP20.54■□□□□ 0.88
GAPDH-211ENST00000619601 WIZO95785 1651 aa20.5■□□□□ 0.87
GAPDH-211ENST00000619601 KIF21AQ7Z4S6 1674 aa20.49■□□□□ 0.87
GAPDH-211ENST00000619601 RSF1Q96T23 1441 aaPredicted RBP20.44■□□□□ 0.86
GAPDH-211ENST00000619601 PDS5BQ9NTI5 1447 aa20.43■□□□□ 0.86
GAPDH-211ENST00000619601 CADPSQ9ULU8 1353 aa20.37■□□□□ 0.85
GAPDH-211ENST00000619601 TOP2AP11388 1531 aaKnown RBP20.31■□□□□ 0.84
GAPDH-211ENST00000619601 MRC2Q9UBG0 1479 aa20.26■□□□□ 0.83
GAPDH-211ENST00000619601 WDR62O43379 1518 aa20.22■□□□□ 0.83
GAPDH-211ENST00000619601 CEP164Q9UPV0 1460 aa20.17■□□□□ 0.82
GAPDH-211ENST00000619601 CFTRP13569 1480 aa20.15■□□□□ 0.82
GAPDH-211ENST00000619601 FANCD2Q9BXW9 1451 aa20.15■□□□□ 0.82
GAPDH-211ENST00000619601 CCDC88BA6NC98 1476 aa20.05■□□□□ 0.8
GAPDH-211ENST00000619601 PRDM2Q13029 1718 aa20■□□□□ 0.79
GAPDH-211ENST00000619601 URB2Q14146 1524 aaKnown RBP20■□□□□ 0.79
GAPDH-211ENST00000619601 TRIM41Q8WV44 630 aa19.94■□□□□ 0.78
GAPDH-211ENST00000619601 OSCARQ8IYS5 282 aa19.85■□□□□ 0.77
GAPDH-211ENST00000619601 ABCC8Q09428 1581 aa19.78■□□□□ 0.76
GAPDH-211ENST00000619601 TOPBP1Q92547 1522 aa19.76■□□□□ 0.75
GAPDH-211ENST00000619601 IFT140Q96RY7 1462 aa19.76■□□□□ 0.75
GAPDH-211ENST00000619601 ZNF608Q9ULD9 1512 aaPredicted RBP19.76■□□□□ 0.75
GAPDH-211ENST00000619601 SUPT5HO00267 1087 aaKnown RBP19.72■□□□□ 0.75
GAPDH-211ENST00000619601 DNMBPQ6XZF7 1577 aa19.7■□□□□ 0.74
GAPDH-211ENST00000619601 EIF4G3O43432 1585 aaKnown RBP19.66■□□□□ 0.74
GAPDH-211ENST00000619601 RIMBP3CA6NJZ7 1639 aa19.64■□□□□ 0.73
GAPDH-211ENST00000619601 RIMBP3BA6NNM3 1639 aa19.64■□□□□ 0.73
GAPDH-211ENST00000619601 RIMBP3Q9UFD9 1639 aa19.64■□□□□ 0.73
GAPDH-211ENST00000619601 TARBP1Q13395 1621 aaKnown RBP19.62■□□□□ 0.73
GAPDH-211ENST00000619601 AQRO60306 1485 aaKnown RBP eCLIP19.58■□□□□ 0.721e-12■■■■□ 25.2
GAPDH-211ENST00000619601 CHD1O14646 1710 aa19.56■□□□□ 0.72
GAPDH-211ENST00000619601 POLA1P09884 1462 aaPredicted RBP19.55■□□□□ 0.72
GAPDH-211ENST00000619601 ARHGEF11O15085 1522 aa19.54■□□□□ 0.72
GAPDH-211ENST00000619601 RAD54L2Q9Y4B4 1467 aa19.5■□□□□ 0.71
GAPDH-211ENST00000619601 SOGA1O94964 1423 aa19.47■□□□□ 0.71
GAPDH-211ENST00000619601 CUX1P39880 1505 aa19.46■□□□□ 0.71
GAPDH-211ENST00000619601 FGD5Q6ZNL6 1462 aa19.45■□□□□ 0.7
GAPDH-211ENST00000619601 FBLN2P98095 1184 aa19.44■□□□□ 0.7
GAPDH-211ENST00000619601 TDRD9Q8NDG6 1382 aaKnown RBP19.44■□□□□ 0.7
GAPDH-211ENST00000619601 WDR97A6NE52 1622 aa19.43■□□□□ 0.7
GAPDH-211ENST00000619601 CYB5RLQ6IPT4 315 aa19.4■□□□□ 0.7
GAPDH-211ENST00000619601 SNAPC4Q5SXM2 1469 aa19.36■□□□□ 0.69
GAPDH-211ENST00000619601 ARAP1Q96P48 1450 aa19.35■□□□□ 0.69
GAPDH-211ENST00000619601 MAGI1Q96QZ7 1491 aaPredicted RBP19.3■□□□□ 0.68
GAPDH-211ENST00000619601 CLASP1Q7Z460 1538 aa19.3■□□□□ 0.68
GAPDH-211ENST00000619601 GRIN2BQ13224 1484 aa19.29■□□□□ 0.68
GAPDH-211ENST00000619601 WRNQ14191 1432 aaPredicted RBP eCLIP19.29■□□□□ 0.68
GAPDH-211ENST00000619601 CHMP7Q8WUX9 453 aaPredicted RBP19.29■□□□□ 0.68
GAPDH-211ENST00000619601 TOP2BQ02880 1626 aa19.29■□□□□ 0.68
GAPDH-211ENST00000619601 BIVM-ERCC5R4GMW8 1640 aa19.28■□□□□ 0.68
GAPDH-211ENST00000619601 PBRM1Q86U86 1689 aa19.27■□□□□ 0.68
GAPDH-211ENST00000619601 ABCA10Q8WWZ4 1543 aa19.27■□□□□ 0.68
GAPDH-211ENST00000619601 SYNJ1O43426 1573 aa19.27■□□□□ 0.67
GAPDH-211ENST00000619601 SYNJ2O15056 1496 aa19.24■□□□□ 0.67
GAPDH-211ENST00000619601 GAPVD1Q14C86 1478 aa19.23■□□□□ 0.67
GAPDH-211ENST00000619601 ABCA5Q8WWZ7 1642 aa19.21■□□□□ 0.67
GAPDH-211ENST00000619601 TRHP20396 242 aaPredicted RBP19.2■□□□□ 0.66
GAPDH-211ENST00000619601 ERICH3Q5RHP9 1530 aa19.06■□□□□ 0.64
GAPDH-211ENST00000619601 GRIN2AQ12879 1464 aa19.05■□□□□ 0.64
GAPDH-211ENST00000619601 ADAMTS12P58397 1594 aa19.05■□□□□ 0.64
GAPDH-211ENST00000619601 FHAD1B1AJZ9 1412 aa19.02■□□□□ 0.64
GAPDH-211ENST00000619601 CEP170Q5SW79 1584 aa19.02■□□□□ 0.63
GAPDH-211ENST00000619601 ERCC6L2Q5T890 1561 aa19.01■□□□□ 0.63
GAPDH-211ENST00000619601 NUP160Q12769 1436 aa18.99■□□□□ 0.63
GAPDH-211ENST00000619601 SHROOM2Q13796 1616 aa18.94■□□□□ 0.62
GAPDH-211ENST00000619601 KIF27Q86VH2 1401 aa18.93■□□□□ 0.62
GAPDH-211ENST00000619601 CUL7Q14999 1698 aa18.85■□□□□ 0.61
GAPDH-211ENST00000619601 IGF1RP08069 1367 aa18.84■□□□□ 0.61
GAPDH-211ENST00000619601 PRG4Q92954 1404 aaPredicted RBP18.82■□□□□ 0.6
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