RNA–Protein interactions for RNA: ENST00000619564.3

FGFR1-241, Transcript of fibroblast growth factor receptor 1, humanhuman

TSL 5 BASIC

Gene FGFR1, Length 5,482 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR1-241ENST00000619564 SETD5Q9C0A6 1442 aa25.88■■□□□ 1.73
FGFR1-241ENST00000619564 PAK3O75914 559 aaPredicted RBP25.86■■□□□ 1.73
FGFR1-241ENST00000619564 DNTTIP2Q5QJE6 756 aaKnown RBP25.85■■□□□ 1.73
FGFR1-241ENST00000619564 CSB-PGBD3P0DP91 1061 aa25.82■■□□□ 1.72
FGFR1-241ENST00000619564 KTN1Q86UP2 1357 aaKnown RBP25.82■■□□□ 1.72
FGFR1-241ENST00000619564 GOLGA6L6A8MZA4 724 aa25.82■■□□□ 1.72
FGFR1-241ENST00000619564 MCCP23508 829 aa25.81■■□□□ 1.72
FGFR1-241ENST00000619564 PLCB2Q00722 1185 aa25.81■■□□□ 1.72
FGFR1-241ENST00000619564 HSPA5P11021 654 aaKnown RBP25.81■■□□□ 1.72
FGFR1-241ENST00000619564 CALD1Q05682 793 aaKnown RBP25.78■■□□□ 1.72
FGFR1-241ENST00000619564 FMN1Q68DA7 1419 aa25.78■■□□□ 1.72
FGFR1-241ENST00000619564 GOLGA6L4A6NEF3 574 aa25.78■■□□□ 1.72
FGFR1-241ENST00000619564 CFAP44Q96MT7 982 aa25.78■■□□□ 1.72
FGFR1-241ENST00000619564 ANKRD30AQ9BXX3 1397 aa25.78■■□□□ 1.72
FGFR1-241ENST00000619564 VPS8Q8N3P4 1428 aa25.77■■□□□ 1.72
FGFR1-241ENST00000619564 SMARCA2P51531 1590 aa25.77■■□□□ 1.72
FGFR1-241ENST00000619564 NUP155O75694 1391 aa25.77■■□□□ 1.72
FGFR1-241ENST00000619564 TDRD9Q8NDG6 1382 aaKnown RBP25.77■■□□□ 1.72
FGFR1-241ENST00000619564 IPO8O15397 1037 aaKnown RBP25.77■■□□□ 1.72
FGFR1-241ENST00000619564 ROCK2O75116 1388 aaKnown RBP25.76■■□□□ 1.71
FGFR1-241ENST00000619564 HSCBQ8IWL3 235 aa25.75■■□□□ 1.71
FGFR1-241ENST00000619564 FOXD1Q16676 465 aa25.74■■□□□ 1.71
FGFR1-241ENST00000619564 NRDCO43847 1150 aa25.73■■□□□ 1.71
FGFR1-241ENST00000619564 U2AF1L5P0DN76 240 aaPredicted RBP25.73■■□□□ 1.71
FGFR1-241ENST00000619564 U2AF1Q01081 240 aaKnown RBP eCLIP25.73■■□□□ 1.71
FGFR1-241ENST00000619564 CCER2I3L3R5 266 aa25.72■■□□□ 1.71
FGFR1-241ENST00000619564 B4GALNT3Q6L9W6 998 aa25.72■■□□□ 1.71
FGFR1-241ENST00000619564 CCDC88BA6NC98 1476 aa25.72■■□□□ 1.71
FGFR1-241ENST00000619564 ISY1Q9ULR0 285 aaKnown RBP25.72■■□□□ 1.71
FGFR1-241ENST00000619564 EIF3AQ14152 1382 aaKnown RBP25.71■■□□□ 1.71
FGFR1-241ENST00000619564 KIF3BO15066 747 aa25.71■■□□□ 1.71
FGFR1-241ENST00000619564 MPHOSPH9Q99550 1183 aa25.7■■□□□ 1.7
FGFR1-241ENST00000619564 CHMP4AQ9BY43 222 aa25.69■■□□□ 1.7
FGFR1-241ENST00000619564 EID1Q9Y6B2 187 aa25.69■■□□□ 1.7
FGFR1-241ENST00000619564 ZNF330Q9Y3S2 320 aaPredicted RBP25.69■■□□□ 1.7
FGFR1-241ENST00000619564 KANK4Q5T7N3 995 aaPredicted RBP25.67■■□□□ 1.7
FGFR1-241ENST00000619564 ERICH6BQ5W0A0 696 aa25.65■■□□□ 1.7
FGFR1-241ENST00000619564 NOP58Q9Y2X3 529 aaKnown RBP25.65■■□□□ 1.7
FGFR1-241ENST00000619564 RALBP1Q15311 655 aa25.64■■□□□ 1.7
FGFR1-241ENST00000619564 KIAA1211Q6ZU35 1233 aa25.64■■□□□ 1.7
FGFR1-241ENST00000619564 APBB1O00213 710 aa25.64■■□□□ 1.69
FGFR1-241ENST00000619564 TERF2IPQ9NYB0 399 aa25.63■■□□□ 1.69
FGFR1-241ENST00000619564 CCDC9Q9Y3X0 531 aaKnown RBP25.63■■□□□ 1.69
FGFR1-241ENST00000619564 SPAG9O60271 1321 aaKnown RBP25.63■■□□□ 1.69
FGFR1-241ENST00000619564 TMX4Q9H1E5 349 aaPredicted RBP25.62■■□□□ 1.69
FGFR1-241ENST00000619564 GNL2Q13823 731 aaKnown RBP25.6■■□□□ 1.69
FGFR1-241ENST00000619564 RSPH4AQ5TD94 716 aa25.6■■□□□ 1.69
FGFR1-241ENST00000619564 ABCC8Q09428 1581 aa25.6■■□□□ 1.69
FGFR1-241ENST00000619564 WASHC2CQ9Y4E1 1318 aa25.6■■□□□ 1.69
FGFR1-241ENST00000619564 CLSTN1O94985 981 aa25.6■■□□□ 1.69
FGFR1-241ENST00000619564 HNRNPMP52272 730 aaKnown RBP eCLIP25.6■■□□□ 1.696e-6■□□□□ 8.8
FGFR1-241ENST00000619564 STK31Q9BXU1 1019 aa25.6■■□□□ 1.69
FGFR1-241ENST00000619564 MROH2BQ7Z745 1585 aa25.6■■□□□ 1.69
FGFR1-241ENST00000619564 ITPRIPQ8IWB1 547 aa25.58■■□□□ 1.68
FGFR1-241ENST00000619564 NGDNQ8NEJ9 315 aaKnown RBP25.57■■□□□ 1.68
FGFR1-241ENST00000619564 RAB3GAP2Q9H2M9 1393 aa25.56■■□□□ 1.68
FGFR1-241ENST00000619564 RWDD1Q9H446 243 aaPredicted RBP25.55■■□□□ 1.68
FGFR1-241ENST00000619564 HDAC5Q9UQL6 1122 aa25.53■■□□□ 1.68
FGFR1-241ENST00000619564 GORABQ5T7V8 394 aa25.51■■□□□ 1.67
FGFR1-241ENST00000619564 CCDC18Q5T9S5 1454 aa25.51■■□□□ 1.67
FGFR1-241ENST00000619564 RCAN3Q9UKA8 241 aa25.51■■□□□ 1.67
FGFR1-241ENST00000619564 NUTM2DQ5VT03 806 aaPredicted RBP25.5■■□□□ 1.67
FGFR1-241ENST00000619564 TAF7LQ5H9L4 462 aa25.49■■□□□ 1.67
FGFR1-241ENST00000619564 SPRYD3Q8NCJ5 442 aa25.49■■□□□ 1.67
FGFR1-241ENST00000619564 AMPHP49418 695 aa25.48■■□□□ 1.67
FGFR1-241ENST00000619564 CHMP3Q9Y3E7 222 aa25.48■■□□□ 1.67
FGFR1-241ENST00000619564 NAP1L5Q96NT1 182 aaPredicted RBP25.48■■□□□ 1.67
FGFR1-241ENST00000619564 RAPGEF2Q9Y4G8 1499 aa25.47■■□□□ 1.67
FGFR1-241ENST00000619564 CADPSQ9ULU8 1353 aa25.47■■□□□ 1.67
FGFR1-241ENST00000619564 GPATCH3Q96I76 525 aa25.46■■□□□ 1.67
FGFR1-241ENST00000619564 JPH4Q96JJ6 628 aa25.46■■□□□ 1.67
FGFR1-241ENST00000619564 LMOD3Q0VAK6 560 aa25.46■■□□□ 1.67
FGFR1-241ENST00000619564 SMC4Q9NTJ3 1288 aa25.44■■□□□ 1.66
FGFR1-241ENST00000619564 FHOD3Q2V2M9 1422 aa25.44■■□□□ 1.66
FGFR1-241ENST00000619564 DRC7Q8IY82 874 aa25.44■■□□□ 1.66
FGFR1-241ENST00000619564 HMMRO75330 724 aa25.44■■□□□ 1.66
FGFR1-241ENST00000619564 CHAF1AQ13111 956 aaPredicted RBP25.44■■□□□ 1.66
FGFR1-241ENST00000619564 PMFBP1Q8TBY8 1022 aa25.42■■□□□ 1.66
FGFR1-241ENST00000619564 L3MBTL2Q969R5 705 aa25.4■■□□□ 1.66
FGFR1-241ENST00000619564 HTATSF1O43719 755 aaKnown RBP25.4■■□□□ 1.66
FGFR1-241ENST00000619564 LTV1Q96GA3 475 aaPredicted RBP25.39■■□□□ 1.66
FGFR1-241ENST00000619564 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.39■■□□□ 1.65
FGFR1-241ENST00000619564 L1TD1Q5T7N2 865 aaKnown RBP25.38■■□□□ 1.65
FGFR1-241ENST00000619564 G3V3G9 751 aa25.38■■□□□ 1.65
FGFR1-241ENST00000619564 DCAF8Q5TAQ9 597 aa25.38■■□□□ 1.65
FGFR1-241ENST00000619564 NUTM2FA1L443 756 aa25.37■■□□□ 1.65
FGFR1-241ENST00000619564 SLC4A10Q6U841 1118 aa25.37■■□□□ 1.65
FGFR1-241ENST00000619564 TOP2AP11388 1531 aaKnown RBP25.37■■□□□ 1.65
FGFR1-241ENST00000619564 TRAK1Q9UPV9 953 aa25.37■■□□□ 1.65
FGFR1-241ENST00000619564 GBP4Q96PP9 640 aa25.36■■□□□ 1.65
FGFR1-241ENST00000619564 PTMSP20962 102 aa25.35■■□□□ 1.65
FGFR1-241ENST00000619564 MSNP26038 577 aaKnown RBP25.35■■□□□ 1.65
FGFR1-241ENST00000619564 NLRP13Q86W25 1043 aa25.35■■□□□ 1.65
FGFR1-241ENST00000619564 TRIM6-TRIM34B2RNG4 842 aa25.34■■□□□ 1.65
FGFR1-241ENST00000619564 NCBP3Q53F19 620 aaKnown RBP25.33■■□□□ 1.65
FGFR1-241ENST00000619564 CCDC146Q8IYE0 955 aa25.33■■□□□ 1.65
FGFR1-241ENST00000619564 GTF2E1P29083 439 aaPredicted RBP25.33■■□□□ 1.64
FGFR1-241ENST00000619564 UACAQ9BZF9 1416 aa25.31■■□□□ 1.64
FGFR1-241ENST00000619564 CENPJQ9HC77 1338 aaPredicted RBP25.3■■□□□ 1.64
FGFR1-241ENST00000619564 CCDC144AA2RUR9 1427 aa25.3■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms