RNA–Protein interactions for RNA: ENST00000618562.1

VEGFC-202, Transcript of vascular endothelial growth factor C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VEGFC, Length 2,064 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFC-202ENST00000618562 GCC2Q8IWJ2 1684 aa37.13■■■■□ 3.53
VEGFC-202ENST00000618562 MAPKBP1O60336 1514 aa37.13■■■■□ 3.53
VEGFC-202ENST00000618562 AKNAQ7Z591 1439 aa37.13■■■■□ 3.53
VEGFC-202ENST00000618562 KDM5BQ9UGL1 1544 aa37.12■■■■□ 3.53
VEGFC-202ENST00000618562 ABCC5O15440 1437 aa37.12■■■■□ 3.53
VEGFC-202ENST00000618562 CHIC2Q9UKJ5 165 aa37.12■■■■□ 3.53
VEGFC-202ENST00000618562 RRP7BPQ9NSQ0 103 aa37.06■■■■□ 3.52
VEGFC-202ENST00000618562 ZNF777Q9ULD5 760 aaPredicted RBP37.03■■■■□ 3.52
VEGFC-202ENST00000618562 PREX2Q70Z35 1606 aa37.01■■■■□ 3.52
VEGFC-202ENST00000618562 ROCK1Q13464 1354 aa37.01■■■■□ 3.51
VEGFC-202ENST00000618562 TTC37Q6PGP7 1564 aa37■■■■□ 3.51
VEGFC-202ENST00000618562 CDC42BPBQ9Y5S2 1711 aa37■■■■□ 3.51
VEGFC-202ENST00000618562 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP37■■■■□ 3.51
VEGFC-202ENST00000618562 CROCC2H7BZ55 1655 aa36.99■■■■□ 3.51
VEGFC-202ENST00000618562 KDM6BO15054 1643 aa36.96■■■■□ 3.51
VEGFC-202ENST00000618562 ADGBQ8N7X0 1667 aa36.91■■■■□ 3.5
VEGFC-202ENST00000618562 SAMD9LQ8IVG5 1584 aa36.88■■■■□ 3.49
VEGFC-202ENST00000618562 MYO5CQ9NQX4 1742 aa36.88■■■■□ 3.49
VEGFC-202ENST00000618562 SCAF1Q9H7N4 1312 aaKnown RBP36.87■■■■□ 3.49
VEGFC-202ENST00000618562 KCNH8Q96L42 1107 aa36.86■■■■□ 3.49
VEGFC-202ENST00000618562 ADGRL2O95490 1459 aa36.85■■■■□ 3.49
VEGFC-202ENST00000618562 ACIN1Q9UKV3 1341 aaKnown RBP36.82■■■■□ 3.49
VEGFC-202ENST00000618562 ARHGEF5Q12774 1597 aa36.82■■■■□ 3.48
VEGFC-202ENST00000618562 NCOA1Q15788 1441 aa36.82■■■■□ 3.48
VEGFC-202ENST00000618562 ARHGAP5Q13017 1502 aa36.81■■■■□ 3.48
VEGFC-202ENST00000618562 SHANK2Q9UPX8 1470 aa36.81■■■■□ 3.48
VEGFC-202ENST00000618562 MBD5Q9P267 1494 aa36.8■■■■□ 3.48
VEGFC-202ENST00000618562 CENPBP07199 599 aaPredicted RBP36.79■■■■□ 3.48
VEGFC-202ENST00000618562 WDR7Q9Y4E6 1490 aa36.77■■■■□ 3.48
VEGFC-202ENST00000618562 HNRNPMP52272 730 aaKnown RBP eCLIP36.74■■■■□ 3.47
VEGFC-202ENST00000618562 C9orf84Q5VXU9 1444 aa36.74■■■■□ 3.47
VEGFC-202ENST00000618562 SIN3AQ96ST3 1273 aa36.73■■■■□ 3.47
VEGFC-202ENST00000618562 ANKRD30AQ9BXX3 1397 aa36.72■■■■□ 3.47
VEGFC-202ENST00000618562 PLCH2O75038 1416 aa36.72■■■■□ 3.47
VEGFC-202ENST00000618562 SYCP2Q9BX26 1530 aa36.7■■■■□ 3.47
VEGFC-202ENST00000618562 CCDC141Q6ZP82 1450 aa36.7■■■■□ 3.47
VEGFC-202ENST00000618562 DENND4BO75064 1496 aaPredicted RBP36.69■■■■□ 3.46
VEGFC-202ENST00000618562 NEUROD1Q13562 356 aa36.68■■■■□ 3.46
VEGFC-202ENST00000618562 TRIM52Q96A61 297 aa36.68■■■■□ 3.46
VEGFC-202ENST00000618562 ASXL2Q76L83 1435 aa36.65■■■■□ 3.46
VEGFC-202ENST00000618562 TSPY4P0CV99 314 aa36.65■■■■□ 3.46
VEGFC-202ENST00000618562 TSPY10P0CW01 314 aa36.65■■■■□ 3.46
VEGFC-202ENST00000618562 PLEKHH2Q8IVE3 1493 aa36.63■■■■□ 3.45
VEGFC-202ENST00000618562 KIAA1107Q9UPP5 1409 aa36.63■■■■□ 3.45
VEGFC-202ENST00000618562 RSPH4AQ5TD94 716 aa36.62■■■■□ 3.45
VEGFC-202ENST00000618562 ARAP3Q8WWN8 1544 aa36.6■■■■□ 3.45
VEGFC-202ENST00000618562 ABCA9Q8IUA7 1624 aa36.6■■■■□ 3.45
VEGFC-202ENST00000618562 MPHOSPH9Q99550 1183 aa36.58■■■■□ 3.45
VEGFC-202ENST00000618562 ARHGEF12Q9NZN5 1544 aa36.57■■■■□ 3.45
VEGFC-202ENST00000618562 EFCAB2Q5VUJ9 269 aa36.57■■■■□ 3.44
VEGFC-202ENST00000618562 ANKRD50Q9ULJ7 1429 aa36.57■■■■□ 3.44
VEGFC-202ENST00000618562 MAST1Q9Y2H9 1570 aa36.56■■■■□ 3.44
VEGFC-202ENST00000618562 MIER1Q8N108 512 aa36.55■■■■□ 3.44
VEGFC-202ENST00000618562 ABCC1P33527 1531 aa36.54■■■■□ 3.44
VEGFC-202ENST00000618562 TIMELESSQ9UNS1 1208 aa36.54■■■■□ 3.44
VEGFC-202ENST00000618562 NPM1P06748 294 aaKnown RBP eCLIP36.53■■■■□ 3.44
VEGFC-202ENST00000618562 KIF15Q9NS87 1388 aa36.52■■■■□ 3.44
VEGFC-202ENST00000618562 PZPP20742 1482 aa36.47■■■■□ 3.43
VEGFC-202ENST00000618562 RIMBP3CA6NJZ7 1639 aa36.43■■■■□ 3.42
VEGFC-202ENST00000618562 RIMBP3BA6NNM3 1639 aa36.43■■■■□ 3.42
VEGFC-202ENST00000618562 RIMBP3Q9UFD9 1639 aa36.43■■■■□ 3.42
VEGFC-202ENST00000618562 PLXNC1O60486 1568 aa36.43■■■■□ 3.42
VEGFC-202ENST00000618562 SLC4A1APQ9BWU0 796 aaKnown RBP36.41■■■■□ 3.42
VEGFC-202ENST00000618562 FANCAO15360 1455 aa36.4■■■■□ 3.42
VEGFC-202ENST00000618562 TRAPPC8Q9Y2L5 1435 aa36.4■■■■□ 3.42
VEGFC-202ENST00000618562 FOXD1Q16676 465 aa36.39■■■■□ 3.42
VEGFC-202ENST00000618562 TONSLQ96HA7 1378 aa36.39■■■■□ 3.42
VEGFC-202ENST00000618562 ANKRD30BQ9BXX2 1392 aa36.35■■■■□ 3.41
VEGFC-202ENST00000618562 KDM5DQ9BY66 1539 aa36.34■■■■□ 3.41
VEGFC-202ENST00000618562 PPP1R15AO75807 674 aaPredicted RBP36.33■■■■□ 3.41
VEGFC-202ENST00000618562 CYB5RLQ6IPT4 315 aa36.3■■■■□ 3.4
VEGFC-202ENST00000618562 NUP155O75694 1391 aa36.28■■■■□ 3.4
VEGFC-202ENST00000618562 GTF3C3Q9Y5Q9 886 aa36.26■■■■□ 3.4
VEGFC-202ENST00000618562 DUOX2Q9NRD8 1548 aa36.25■■■■□ 3.39
VEGFC-202ENST00000618562 ADGRL1O94910 1474 aa36.25■■■■□ 3.39
VEGFC-202ENST00000618562 AFAP1Q8N556 730 aa36.23■■■■□ 3.39
VEGFC-202ENST00000618562 ZFYVE16Q7Z3T8 1539 aa36.23■■■■□ 3.39
VEGFC-202ENST00000618562 YTHDC1Q96MU7 727 aaKnown RBP36.22■■■■□ 3.39
VEGFC-202ENST00000618562 CD109Q6YHK3 1445 aa36.22■■■■□ 3.39
VEGFC-202ENST00000618562 RTEL1-TNFRSF6BF6WH68 1400 aa36.21■■■■□ 3.39
VEGFC-202ENST00000618562 RPRD2Q5VT52 1461 aaKnown RBP36.21■■■■□ 3.39
VEGFC-202ENST00000618562 UNC13BO14795 1591 aa36.21■■■■□ 3.39
VEGFC-202ENST00000618562 PKD2Q13563 968 aa36.2■■■■□ 3.39
VEGFC-202ENST00000618562 SPAG9O60271 1321 aaKnown RBP36.2■■■■□ 3.39
VEGFC-202ENST00000618562 SCAPERQ9BY12 1400 aa36.2■■■■□ 3.39
VEGFC-202ENST00000618562 ERBINQ96RT1 1412 aa36.18■■■■□ 3.38
VEGFC-202ENST00000618562 INO80Q9ULG1 1556 aaPredicted RBP36.17■■■■□ 3.38
VEGFC-202ENST00000618562 CFAP74Q9C0B2 1584 aa36.15■■■■□ 3.38
VEGFC-202ENST00000618562 FAM135AQ9P2D6 1515 aa36.15■■■■□ 3.38
VEGFC-202ENST00000618562 ATP7AQ04656 1500 aa36.13■■■■□ 3.37
VEGFC-202ENST00000618562 MAGI2Q86UL8 1455 aa36.08■■■■□ 3.37
VEGFC-202ENST00000618562 TEX14Q8IWB6 1497 aa36.08■■■■□ 3.37
VEGFC-202ENST00000618562 IQGAP3Q86VI3 1631 aa36.07■■■■□ 3.36
VEGFC-202ENST00000618562 L3MBTL2Q969R5 705 aa36.06■■■■□ 3.36
VEGFC-202ENST00000618562 MAP3K4Q9Y6R4 1608 aa36.03■■■■□ 3.36
VEGFC-202ENST00000618562 ZNF518AQ6AHZ1 1483 aa36.03■■■■□ 3.36
VEGFC-202ENST00000618562 GLI2P10070 1586 aa36■■■■□ 3.35
VEGFC-202ENST00000618562 GRWD1Q9BQ67 446 aaKnown RBP eCLIP35.99■■■■□ 3.35
VEGFC-202ENST00000618562 KIDINS220Q9ULH0 1771 aa35.99■■■■□ 3.35
VEGFC-202ENST00000618562 NEO1Q92859 1461 aa35.97■■■■□ 3.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms