RNA–Protein interactions for RNA: ENST00000617806.4

BECN1-222, Transcript of beclin 1, humanhuman

TSL 5

Gene BECN1, Length 4,865 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BECN1-222ENST00000617806 PNNQ9H307 717 aaKnown RBP14.34□□□□□ -0.11
BECN1-222ENST00000617806 PLCB2Q00722 1185 aa14.33□□□□□ -0.11
BECN1-222ENST00000617806 ZBED9Q6R2W3 1325 aa14.33□□□□□ -0.12
BECN1-222ENST00000617806 USP35Q9P2H5 1018 aa14.33□□□□□ -0.12
BECN1-222ENST00000617806 SLC4A3P48751 1232 aa14.33□□□□□ -0.12
BECN1-222ENST00000617806 PRKCSHP14314 528 aaPredicted RBP14.33□□□□□ -0.12
BECN1-222ENST00000617806 U2SURPO15042 1029 aaKnown RBP14.32□□□□□ -0.12
BECN1-222ENST00000617806 TOP2AP11388 1531 aaKnown RBP14.32□□□□□ -0.12
BECN1-222ENST00000617806 MS4A1P11836 297 aa14.32□□□□□ -0.12
BECN1-222ENST00000617806 NPM1P06748 294 aaKnown RBP eCLIP14.31□□□□□ -0.12
BECN1-222ENST00000617806 MSNP26038 577 aaKnown RBP14.31□□□□□ -0.12
BECN1-222ENST00000617806 EXOC6Q8TAG9 804 aa14.31□□□□□ -0.12
BECN1-222ENST00000617806 NLRP13Q86W25 1043 aa14.29□□□□□ -0.12
BECN1-222ENST00000617806 EIF4G1Q04637 1599 aaKnown RBP14.29□□□□□ -0.12
BECN1-222ENST00000617806 GSE1Q14687 1217 aa14.29□□□□□ -0.12
BECN1-222ENST00000617806 ROCK2O75116 1388 aaKnown RBP14.28□□□□□ -0.12
BECN1-222ENST00000617806 PLIN1O60240 522 aa14.28□□□□□ -0.12
BECN1-222ENST00000617806 PDE3BQ13370 1112 aa14.28□□□□□ -0.12
BECN1-222ENST00000617806 PLPPR3Q6T4P5 718 aa14.27□□□□□ -0.12
BECN1-222ENST00000617806 GOLGA6L3A6NEY3 463 aa14.27□□□□□ -0.13
BECN1-222ENST00000617806 FHOD3Q2V2M9 1422 aa14.27□□□□□ -0.13
BECN1-222ENST00000617806 RRP1P56182 461 aaKnown RBP14.26□□□□□ -0.13
BECN1-222ENST00000617806 GOLGA2Q08379 1002 aa14.25□□□□□ -0.13
BECN1-222ENST00000617806 MORC1Q86VD1 984 aa14.25□□□□□ -0.13
BECN1-222ENST00000617806 CHMP4BQ9H444 224 aaKnown RBP14.24□□□□□ -0.13
BECN1-222ENST00000617806 ANO8Q9HCE9 1232 aaPredicted RBP14.24□□□□□ -0.13
BECN1-222ENST00000617806 NUP155O75694 1391 aa14.24□□□□□ -0.13
BECN1-222ENST00000617806 RWDD1Q9H446 243 aaPredicted RBP14.24□□□□□ -0.13
BECN1-222ENST00000617806 GBP4Q96PP9 640 aa14.23□□□□□ -0.13
BECN1-222ENST00000617806 MFAP1P55081 439 aaKnown RBP14.23□□□□□ -0.13
BECN1-222ENST00000617806 CCDC146Q8IYE0 955 aa14.22□□□□□ -0.13
BECN1-222ENST00000617806 MYBBP1AQ9BQG0 1328 aaKnown RBP14.22□□□□□ -0.13
BECN1-222ENST00000617806 ZBTB7CA1YPR0 619 aa14.21□□□□□ -0.13
BECN1-222ENST00000617806 ARID3AQ99856 593 aa14.21□□□□□ -0.13
BECN1-222ENST00000617806 ST20-MTHFSA0A0A6YYL1 179 aa14.21□□□□□ -0.13
BECN1-222ENST00000617806 CLUAP1Q96AJ1 413 aa14.21□□□□□ -0.13
BECN1-222ENST00000617806 FAM161AQ3B820 660 aa14.2□□□□□ -0.14
BECN1-222ENST00000617806 CRBNQ96SW2 442 aa14.2□□□□□ -0.14
BECN1-222ENST00000617806 KIF15Q9NS87 1388 aa14.2□□□□□ -0.14
BECN1-222ENST00000617806 ITPRIPQ8IWB1 547 aa14.19□□□□□ -0.14
BECN1-222ENST00000617806 PMFBP1Q8TBY8 1022 aa14.19□□□□□ -0.14
BECN1-222ENST00000617806 CENPQQ7L2Z9 268 aaPredicted RBP14.19□□□□□ -0.14
BECN1-222ENST00000617806 ZRSR1Q15695 479 aaKnown RBP14.19□□□□□ -0.14
BECN1-222ENST00000617806 CCDC18Q5T9S5 1454 aa14.18□□□□□ -0.14
BECN1-222ENST00000617806 RSPH6AQ9H0K4 717 aa14.18□□□□□ -0.14
BECN1-222ENST00000617806 POGKQ9P215 609 aa14.18□□□□□ -0.14
BECN1-222ENST00000617806 PLEKHG5O94827 1062 aa14.17□□□□□ -0.14
BECN1-222ENST00000617806 MSH5O43196 834 aa14.17□□□□□ -0.14
BECN1-222ENST00000617806 U2AF1L5P0DN76 240 aaPredicted RBP14.16□□□□□ -0.14
BECN1-222ENST00000617806 U2AF1Q01081 240 aaKnown RBP eCLIP14.16□□□□□ -0.14
BECN1-222ENST00000617806 APBB1O00213 710 aa14.16□□□□□ -0.14
BECN1-222ENST00000617806 CENPJQ9HC77 1338 aaPredicted RBP14.15□□□□□ -0.14
BECN1-222ENST00000617806 TDRD9Q8NDG6 1382 aaKnown RBP14.15□□□□□ -0.14
BECN1-222ENST00000617806 CHAF1AQ13111 956 aaPredicted RBP14.15□□□□□ -0.14
BECN1-222ENST00000617806 SAFB2Q14151 953 aaKnown RBP eCLIP14.15□□□□□ -0.14
BECN1-222ENST00000617806 C14orf37Q86TY3 774 aa14.15□□□□□ -0.14
BECN1-222ENST00000617806 FOXD4L1Q9NU39 408 aa14.15□□□□□ -0.14
BECN1-222ENST00000617806 ANKRD30AQ9BXX3 1397 aa14.15□□□□□ -0.14
BECN1-222ENST00000617806 IPO8O15397 1037 aaKnown RBP14.14□□□□□ -0.15
BECN1-222ENST00000617806 PAK3O75914 559 aaPredicted RBP14.14□□□□□ -0.15
BECN1-222ENST00000617806 WASHC2AQ641Q2 1341 aa14.13□□□□□ -0.15
BECN1-222ENST00000617806 HSP90AA2PQ14568 343 aaPredicted RBP14.13□□□□□ -0.15
BECN1-222ENST00000617806 USP47Q96K76 1375 aa14.13□□□□□ -0.15
BECN1-222ENST00000617806 KIF21BO75037 1637 aa14.13□□□□□ -0.15
BECN1-222ENST00000617806 PTMSP20962 102 aa14.13□□□□□ -0.15
BECN1-222ENST00000617806 PANK3Q9H999 370 aa14.13□□□□□ -0.15
BECN1-222ENST00000617806 PHLDB1Q86UU1 1377 aa14.12□□□□□ -0.15
BECN1-222ENST00000617806 SRPK2P78362 688 aaKnown RBP14.12□□□□□ -0.15
BECN1-222ENST00000617806 CCDC7Q96M83 1385 aa14.12□□□□□ -0.15
BECN1-222ENST00000617806 SMC4Q9NTJ3 1288 aa14.12□□□□□ -0.15
BECN1-222ENST00000617806 SMARCA2P51531 1590 aa14.12□□□□□ -0.15
BECN1-222ENST00000617806 KIF7Q2M1P5 1343 aa14.11□□□□□ -0.15
BECN1-222ENST00000617806 NFKBIBQ15653 356 aa14.1□□□□□ -0.15
BECN1-222ENST00000617806 GOLGA6L4A6NEF3 574 aa14.1□□□□□ -0.15
BECN1-222ENST00000617806 KCNJ4P48050 445 aa14.1□□□□□ -0.15
BECN1-222ENST00000617806 MCCP23508 829 aa14.09□□□□□ -0.15
BECN1-222ENST00000617806 CNTLNQ9NXG0 1405 aa14.09□□□□□ -0.15
BECN1-222ENST00000617806 CDK11BP21127 795 aaKnown RBP14.09□□□□□ -0.15
BECN1-222ENST00000617806 VSIG10Q8N0Z9 540 aa14.09□□□□□ -0.15
BECN1-222ENST00000617806 IL27Q8NEV9 243 aa14.09□□□□□ -0.15
BECN1-222ENST00000617806 BCL2L13Q9BXK5 485 aa14.09□□□□□ -0.15
BECN1-222ENST00000617806 OS9Q13438 667 aaPredicted RBP14.09□□□□□ -0.15
BECN1-222ENST00000617806 CFAP44Q96MT7 982 aa14.09□□□□□ -0.15
BECN1-222ENST00000617806 CALD1Q05682 793 aaKnown RBP14.08□□□□□ -0.16
BECN1-222ENST00000617806 KIAA2012Q0VF49 1180 aa14.08□□□□□ -0.16
BECN1-222ENST00000617806 COG6Q9Y2V7 657 aa14.08□□□□□ -0.16
BECN1-222ENST00000617806 RRP7AQ9Y3A4 280 aaKnown RBP14.08□□□□□ -0.16
BECN1-222ENST00000617806 DRC7Q8IY82 874 aa14.07□□□□□ -0.16
BECN1-222ENST00000617806 TAOK2Q9UL54 1235 aa14.07□□□□□ -0.16
BECN1-222ENST00000617806 FGD1P98174 961 aa14.06□□□□□ -0.16
BECN1-222ENST00000617806 HNRNPMP52272 730 aaKnown RBP eCLIP14.06□□□□□ -0.16
BECN1-222ENST00000617806 DDX11L8A8MPP1 907 aa14.06□□□□□ -0.16
BECN1-222ENST00000617806 SMARCA4P51532 1647 aa14.05□□□□□ -0.16
BECN1-222ENST00000617806 KANK1Q14678 1352 aa14.05□□□□□ -0.16
BECN1-222ENST00000617806 AMER1Q5JTC6 1135 aaPredicted RBP14.04□□□□□ -0.16
BECN1-222ENST00000617806 BRPF3Q9ULD4 1205 aa14.04□□□□□ -0.16
BECN1-222ENST00000617806 UACAQ9BZF9 1416 aa14.04□□□□□ -0.16
BECN1-222ENST00000617806 GOLGA6L6A8MZA4 724 aa14.04□□□□□ -0.16
BECN1-222ENST00000617806 STK26Q9P289 416 aa14.04□□□□□ -0.16
BECN1-222ENST00000617806 APAF1O14727 1248 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms