RNA–Protein interactions for RNA: ENST00000615843.4

SPAST-203, Transcript of spastin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SPAST, Length 5,212 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-203ENST00000615843 CFAP44Q96MT7 982 aa23.93■■□□□ 1.42
SPAST-203ENST00000615843 PLPPR3Q6T4P5 718 aa23.93■■□□□ 1.42
SPAST-203ENST00000615843 ZBTB7CA1YPR0 619 aa23.92■■□□□ 1.42
SPAST-203ENST00000615843 HSP90AA2PQ14568 343 aaPredicted RBP23.92■■□□□ 1.42
SPAST-203ENST00000615843 GSE1Q14687 1217 aa23.92■■□□□ 1.42
SPAST-203ENST00000615843 DRC7Q8IY82 874 aa23.91■■□□□ 1.42
SPAST-203ENST00000615843 RWDD1Q9H446 243 aaPredicted RBP23.91■■□□□ 1.42
SPAST-203ENST00000615843 MCCP23508 829 aa23.9■■□□□ 1.42
SPAST-203ENST00000615843 ARHGAP35Q9NRY4 1499 aa23.9■■□□□ 1.42
SPAST-203ENST00000615843 KCNJ4P48050 445 aa23.88■■□□□ 1.41
SPAST-203ENST00000615843 FGD1P98174 961 aa23.87■■□□□ 1.41
SPAST-203ENST00000615843 PDE4AP27815 886 aa23.86■■□□□ 1.41
SPAST-203ENST00000615843 FOXD1Q16676 465 aa23.85■■□□□ 1.41
SPAST-203ENST00000615843 BAZ1BQ9UIG0 1483 aaKnown RBP23.85■■□□□ 1.41
SPAST-203ENST00000615843 C14orf37Q86TY3 774 aa23.84■■□□□ 1.41
SPAST-203ENST00000615843 MFAP1P55081 439 aaKnown RBP23.84■■□□□ 1.41
SPAST-203ENST00000615843 PDE3BQ13370 1112 aa23.83■■□□□ 1.41
SPAST-203ENST00000615843 OS9Q13438 667 aaPredicted RBP23.83■■□□□ 1.41
SPAST-203ENST00000615843 PMFBP1Q8TBY8 1022 aa23.83■■□□□ 1.41
SPAST-203ENST00000615843 MORC1Q86VD1 984 aa23.82■■□□□ 1.4
SPAST-203ENST00000615843 VSIG10Q8N0Z9 540 aa23.81■■□□□ 1.4
SPAST-203ENST00000615843 DHX57Q6P158 1386 aaKnown RBP23.81■■□□□ 1.4
SPAST-203ENST00000615843 IPO8O15397 1037 aaKnown RBP23.8■■□□□ 1.4
SPAST-203ENST00000615843 SYAP1Q96A49 352 aaPredicted RBP23.79■■□□□ 1.4
SPAST-203ENST00000615843 MPHOSPH9Q99550 1183 aa23.78■■□□□ 1.4
SPAST-203ENST00000615843 SLC4A3P48751 1232 aa23.77■■□□□ 1.4
SPAST-203ENST00000615843 PKD2Q13563 968 aa23.77■■□□□ 1.4
SPAST-203ENST00000615843 CARMIL1Q5VZK9 1371 aa23.77■■□□□ 1.4
SPAST-203ENST00000615843 BAZ1AQ9NRL2 1556 aaPredicted RBP23.77■■□□□ 1.4
SPAST-203ENST00000615843 TAOK2Q9UL54 1235 aa23.77■■□□□ 1.39
SPAST-203ENST00000615843 CCDC88BA6NC98 1476 aa23.76■■□□□ 1.39
SPAST-203ENST00000615843 CECR2Q9BXF3 1484 aa23.76■■□□□ 1.39
SPAST-203ENST00000615843 CALD1Q05682 793 aaKnown RBP23.76■■□□□ 1.39
SPAST-203ENST00000615843 ITPRIPQ8IWB1 547 aa23.76■■□□□ 1.39
SPAST-203ENST00000615843 POGKQ9P215 609 aa23.76■■□□□ 1.39
SPAST-203ENST00000615843 GOLGA2Q08379 1002 aa23.76■■□□□ 1.39
SPAST-203ENST00000615843 NAP1L2Q9ULW6 460 aaPredicted RBP23.76■■□□□ 1.39
SPAST-203ENST00000615843 PLEKHG5O94827 1062 aa23.75■■□□□ 1.39
SPAST-203ENST00000615843 NLRP13Q86W25 1043 aa23.74■■□□□ 1.39
SPAST-203ENST00000615843 ABCC8Q09428 1581 aa23.73■■□□□ 1.39
SPAST-203ENST00000615843 FAM161AQ3B820 660 aa23.73■■□□□ 1.39
SPAST-203ENST00000615843 ZBED9Q6R2W3 1325 aa23.73■■□□□ 1.39
SPAST-203ENST00000615843 L3MBTL2Q969R5 705 aa23.72■■□□□ 1.39
SPAST-203ENST00000615843 DDX11L8A8MPP1 907 aa23.71■■□□□ 1.39
SPAST-203ENST00000615843 APBB1O00213 710 aa23.71■■□□□ 1.39
SPAST-203ENST00000615843 ROCK2O75116 1388 aaKnown RBP23.7■■□□□ 1.39
SPAST-203ENST00000615843 CENPQQ7L2Z9 268 aaPredicted RBP23.7■■□□□ 1.38
SPAST-203ENST00000615843 EXOC6Q8TAG9 804 aa23.69■■□□□ 1.38
SPAST-203ENST00000615843 FMN1Q68DA7 1419 aa23.69■■□□□ 1.38
SPAST-203ENST00000615843 HAP1P54257 671 aaPredicted RBP23.67■■□□□ 1.38
SPAST-203ENST00000615843 RRP1P56182 461 aaKnown RBP23.67■■□□□ 1.38
SPAST-203ENST00000615843 FOXD4L1Q9NU39 408 aa23.67■■□□□ 1.38
SPAST-203ENST00000615843 CUX2O14529 1486 aa23.66■■□□□ 1.38
SPAST-203ENST00000615843 PRKRIP1Q9H875 184 aaPredicted RBP23.66■■□□□ 1.38
SPAST-203ENST00000615843 TNNT3P45378 269 aaPredicted RBP23.66■■□□□ 1.38
SPAST-203ENST00000615843 CENPJQ9HC77 1338 aaPredicted RBP23.64■■□□□ 1.37
SPAST-203ENST00000615843 U2AF1L5P0DN76 240 aaPredicted RBP23.64■■□□□ 1.37
SPAST-203ENST00000615843 U2AF1Q01081 240 aaKnown RBP eCLIP23.64■■□□□ 1.37
SPAST-203ENST00000615843 KIAA1211Q6ZU35 1233 aa23.64■■□□□ 1.37
SPAST-203ENST00000615843 CLUAP1Q96AJ1 413 aa23.63■■□□□ 1.37
SPAST-203ENST00000615843 A0A0G2JS52 829 aa23.62■■□□□ 1.37
SPAST-203ENST00000615843 SMC4Q9NTJ3 1288 aa23.61■■□□□ 1.37
SPAST-203ENST00000615843 MYBBP1AQ9BQG0 1328 aaKnown RBP23.6■■□□□ 1.37
SPAST-203ENST00000615843 PHLDB1Q86UU1 1377 aa23.6■■□□□ 1.37
SPAST-203ENST00000615843 PLIN1O60240 522 aa23.6■■□□□ 1.37
SPAST-203ENST00000615843 NACADO15069 1562 aa23.6■■□□□ 1.37
SPAST-203ENST00000615843 KIF15Q9NS87 1388 aa23.59■■□□□ 1.37
SPAST-203ENST00000615843 SRPK2P78362 688 aaKnown RBP23.58■■□□□ 1.37
SPAST-203ENST00000615843 CCDC146Q8IYE0 955 aa23.58■■□□□ 1.37
SPAST-203ENST00000615843 CRBNQ96SW2 442 aa23.57■■□□□ 1.36
SPAST-203ENST00000615843 SKOR2Q2VWA4 1001 aaPredicted RBP23.57■■□□□ 1.36
SPAST-203ENST00000615843 HTATSF1O43719 755 aaKnown RBP23.56■■□□□ 1.36
SPAST-203ENST00000615843 DDX49Q9Y6V7 483 aaKnown RBP23.55■■□□□ 1.36
SPAST-203ENST00000615843 PHF14O94880 888 aa23.54■■□□□ 1.36
SPAST-203ENST00000615843 NUP155O75694 1391 aa23.53■■□□□ 1.36
SPAST-203ENST00000615843 EIF4G1Q04637 1599 aaKnown RBP23.52■■□□□ 1.35
SPAST-203ENST00000615843 KANK1Q14678 1352 aa23.51■■□□□ 1.35
SPAST-203ENST00000615843 ST18O60284 1047 aa23.51■■□□□ 1.35
SPAST-203ENST00000615843 CSPP1Q1MSJ5 1256 aa23.5■■□□□ 1.35
SPAST-203ENST00000615843 MROH2BQ7Z745 1585 aa23.49■■□□□ 1.35
SPAST-203ENST00000615843 SAFB2Q14151 953 aaKnown RBP eCLIP23.49■■□□□ 1.35
SPAST-203ENST00000615843 NFKBIBQ15653 356 aa23.48■■□□□ 1.35
SPAST-203ENST00000615843 TULP1O00294 542 aaPredicted RBP23.47■■□□□ 1.35
SPAST-203ENST00000615843 RTF1Q92541 710 aaKnown RBP23.47■■□□□ 1.35
SPAST-203ENST00000615843 GNL2Q13823 731 aaKnown RBP23.46■■□□□ 1.35
SPAST-203ENST00000615843 NOL8Q76FK4 1167 aaKnown RBP23.46■■□□□ 1.35
SPAST-203ENST00000615843 TPM4P67936 248 aa23.45■■□□□ 1.34
SPAST-203ENST00000615843 FOXD4L5Q5VV16 416 aaPredicted RBP23.45■■□□□ 1.34
SPAST-203ENST00000615843 FOXD4L4Q8WXT5 416 aaPredicted RBP23.45■■□□□ 1.34
SPAST-203ENST00000615843 CGNL1Q0VF96 1302 aa23.44■■□□□ 1.34
SPAST-203ENST00000615843 TRIM6-TRIM34B2RNG4 842 aa23.43■■□□□ 1.34
SPAST-203ENST00000615843 HMMRO75330 724 aa23.43■■□□□ 1.34
SPAST-203ENST00000615843 ANKRD30AQ9BXX3 1397 aa23.43■■□□□ 1.34
SPAST-203ENST00000615843 HDGFL2Q7Z4V5 671 aaPredicted RBP23.42■■□□□ 1.34
SPAST-203ENST00000615843 FAM13BQ9NYF5 915 aa23.42■■□□□ 1.34
SPAST-203ENST00000615843 CHMP5Q9NZZ3 219 aa23.42■■□□□ 1.34
SPAST-203ENST00000615843 ST20-MTHFSA0A0A6YYL1 179 aa23.41■■□□□ 1.34
SPAST-203ENST00000615843 SOX12O15370 315 aa23.41■■□□□ 1.34
SPAST-203ENST00000615843 ANO8Q9HCE9 1232 aaPredicted RBP23.41■■□□□ 1.34
SPAST-203ENST00000615843 FAM43AQ8N2R8 423 aa23.4■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms