RNA–Protein interactions for RNA: ENST00000615729.4

UBXN8-207, Transcript of UBX domain protein 8, humanhuman

TSL 1 (best) BASIC

Gene UBXN8, Length 702 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN8-207ENST00000615729 MAGI2Q86UL8 1455 aa17.14■□□□□ 0.33
UBXN8-207ENST00000615729 P3H3Q8IVL6 736 aa17.14■□□□□ 0.33
UBXN8-207ENST00000615729 U3KPZ7 1027 aaPredicted RBP17.13■□□□□ 0.33
UBXN8-207ENST00000615729 PLEKHD1A6NEE1 506 aa17.12■□□□□ 0.33
UBXN8-207ENST00000615729 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.12■□□□□ 0.33
UBXN8-207ENST00000615729 HNRNPUL2Q1KMD3 747 aaKnown RBP17.12■□□□□ 0.33
UBXN8-207ENST00000615729 DISP3Q9P2K9 1392 aa17.1■□□□□ 0.33
UBXN8-207ENST00000615729 ZMYM4Q5VZL5 1548 aa17.1■□□□□ 0.33
UBXN8-207ENST00000615729 RIMS1Q86UR5 1692 aaKnown RBP17.1■□□□□ 0.33
UBXN8-207ENST00000615729 ILDR2Q71H61 639 aa17.09■□□□□ 0.33
UBXN8-207ENST00000615729 NUP153P49790 1475 aaKnown RBP17.09■□□□□ 0.33
UBXN8-207ENST00000615729 RAPGEF6Q8TEU7 1601 aa17.07■□□□□ 0.32
UBXN8-207ENST00000615729 SAMD9Q5K651 1589 aa17.07■□□□□ 0.32
UBXN8-207ENST00000615729 YEATS2Q9ULM3 1422 aa17.07■□□□□ 0.32
UBXN8-207ENST00000615729 EFCAB5A4FU69 1503 aa17.06■□□□□ 0.32
UBXN8-207ENST00000615729 RICTORQ6R327 1708 aa17.06■□□□□ 0.32
UBXN8-207ENST00000615729 ZFYVE16Q7Z3T8 1539 aa17.05■□□□□ 0.32
UBXN8-207ENST00000615729 CFAP74Q9C0B2 1584 aa17.04■□□□□ 0.32
UBXN8-207ENST00000615729 TTC37Q6PGP7 1564 aa17.03■□□□□ 0.32
UBXN8-207ENST00000615729 ARHGEF12Q9NZN5 1544 aa17.01■□□□□ 0.31
UBXN8-207ENST00000615729 MLECQ14165 292 aa17■□□□□ 0.31
UBXN8-207ENST00000615729 CSRNP3Q8WYN3 585 aa17■□□□□ 0.31
UBXN8-207ENST00000615729 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17■□□□□ 0.31
UBXN8-207ENST00000615729 ATP10AO60312 1499 aa16.99■□□□□ 0.31
UBXN8-207ENST00000615729 DSG3P32926 999 aa16.99■□□□□ 0.31
UBXN8-207ENST00000615729 PLCH2O75038 1416 aa16.98■□□□□ 0.31
UBXN8-207ENST00000615729 SCAPERQ9BY12 1400 aa16.98■□□□□ 0.31
UBXN8-207ENST00000615729 SPINK5Q9NQ38 1064 aaPredicted RBP16.98■□□□□ 0.31
UBXN8-207ENST00000615729 PTPRTO14522 1441 aa16.97■□□□□ 0.31
UBXN8-207ENST00000615729 C9orf84Q5VXU9 1444 aa16.96■□□□□ 0.31
UBXN8-207ENST00000615729 HECW1Q76N89 1606 aa16.96■□□□□ 0.3
UBXN8-207ENST00000615729 CAPN15O75808 1086 aa16.95■□□□□ 0.3
UBXN8-207ENST00000615729 EFCAB2Q5VUJ9 269 aa16.94■□□□□ 0.3
UBXN8-207ENST00000615729 UHRF1BP1Q6BDS2 1440 aa16.94■□□□□ 0.3
UBXN8-207ENST00000615729 SIGLEC1Q9BZZ2 1709 aa16.93■□□□□ 0.3
UBXN8-207ENST00000615729 IQSEC2Q5JU85 1478 aa16.93■□□□□ 0.3
UBXN8-207ENST00000615729 PREX1Q8TCU6 1659 aa16.92■□□□□ 0.3
UBXN8-207ENST00000615729 CEBPAP49715 358 aaPredicted RBP16.92■□□□□ 0.3
UBXN8-207ENST00000615729 FER1L4A9Z1Z3 1794 aa16.91■□□□□ 0.3
UBXN8-207ENST00000615729 SPATA31D1Q6ZQQ2 1576 aa16.88■□□□□ 0.29
UBXN8-207ENST00000615729 STRCQ7RTU9 1775 aa16.87■□□□□ 0.29
UBXN8-207ENST00000615729 SETD1BQ9UPS6 1966 aaKnown RBP16.87■□□□□ 0.29
UBXN8-207ENST00000615729 ZNF518AQ6AHZ1 1483 aa16.86■□□□□ 0.29
UBXN8-207ENST00000615729 CDK11AQ9UQ88 783 aaPredicted RBP16.86■□□□□ 0.29
UBXN8-207ENST00000615729 EEA1Q15075 1411 aa16.86■□□□□ 0.29
UBXN8-207ENST00000615729 TRAPPC8Q9Y2L5 1435 aa16.84■□□□□ 0.29
UBXN8-207ENST00000615729 LTBP4Q8N2S1 1624 aa16.84■□□□□ 0.29
UBXN8-207ENST00000615729 REREQ9P2R6 1566 aa16.83■□□□□ 0.28
UBXN8-207ENST00000615729 AFAP1Q8N556 730 aa16.82■□□□□ 0.28
UBXN8-207ENST00000615729 RANGAP1P46060 587 aaPredicted RBP16.81■□□□□ 0.28
UBXN8-207ENST00000615729 KDM5CP41229 1560 aa16.81■□□□□ 0.28
UBXN8-207ENST00000615729 MLH3Q9UHC1 1453 aa16.8■□□□□ 0.28
UBXN8-207ENST00000615729 NCOA1Q15788 1441 aa16.8■□□□□ 0.28
UBXN8-207ENST00000615729 KCNA4P22459 653 aa16.8■□□□□ 0.28
UBXN8-207ENST00000615729 ESF1Q9H501 851 aaKnown RBP16.8■□□□□ 0.28
UBXN8-207ENST00000615729 AGLP35573 1532 aa16.8■□□□□ 0.28
UBXN8-207ENST00000615729 CDK13Q14004 1512 aaKnown RBP16.79■□□□□ 0.28
UBXN8-207ENST00000615729 CNTLNQ9NXG0 1405 aa16.79■□□□□ 0.28
UBXN8-207ENST00000615729 SLC4A2P04920 1241 aa16.78■□□□□ 0.28
UBXN8-207ENST00000615729 POTEHQ6S545 545 aa16.78■□□□□ 0.28
UBXN8-207ENST00000615729 FMN1Q68DA7 1419 aa16.76■□□□□ 0.27
UBXN8-207ENST00000615729 NPATQ14207 1427 aa16.75■□□□□ 0.27
UBXN8-207ENST00000615729 TROQ12816 1431 aaPredicted RBP16.74■□□□□ 0.27
UBXN8-207ENST00000615729 MYT1LQ9UL68 1186 aa16.74■□□□□ 0.27
UBXN8-207ENST00000615729 DIP2CQ9Y2E4 1556 aa16.73■□□□□ 0.27
UBXN8-207ENST00000615729 ARHGAP5Q13017 1502 aa16.71■□□□□ 0.27
UBXN8-207ENST00000615729 PKD2Q13563 968 aa16.71■□□□□ 0.27
UBXN8-207ENST00000615729 CLIP1P30622 1438 aa16.7■□□□□ 0.26
UBXN8-207ENST00000615729 MYO5CQ9NQX4 1742 aa16.7■□□□□ 0.26
UBXN8-207ENST00000615729 UBAP1LF5GYI3 381 aa16.7■□□□□ 0.26
UBXN8-207ENST00000615729 C3P01024 1663 aa16.69■□□□□ 0.26
UBXN8-207ENST00000615729 KIF14Q15058 1648 aa16.67■□□□□ 0.26
UBXN8-207ENST00000615729 ATP1B4Q9UN42 357 aaPredicted RBP16.67■□□□□ 0.26
UBXN8-207ENST00000615729 PLA2R1Q13018 1463 aa16.67■□□□□ 0.26
UBXN8-207ENST00000615729 ZMYM3Q14202 1370 aa16.66■□□□□ 0.26
UBXN8-207ENST00000615729 ZNF335Q9H4Z2 1342 aaPredicted RBP16.66■□□□□ 0.26
UBXN8-207ENST00000615729 CAMSAP1Q5T5Y3 1602 aa16.65■□□□□ 0.26
UBXN8-207ENST00000615729 ABCA6Q8N139 1617 aa16.65■□□□□ 0.26
UBXN8-207ENST00000615729 NCKAP5LQ9HCH0 1330 aa16.65■□□□□ 0.26
UBXN8-207ENST00000615729 APLP2Q06481 763 aa16.64■□□□□ 0.25
UBXN8-207ENST00000615729 TCOF1Q13428 1488 aaKnown RBP16.62■□□□□ 0.25
UBXN8-207ENST00000615729 ABCC1P33527 1531 aa16.62■□□□□ 0.25
UBXN8-207ENST00000615729 ARHGAP35Q9NRY4 1499 aa16.61■□□□□ 0.25
UBXN8-207ENST00000615729 MROH2AA6NES4 1674 aa16.59■□□□□ 0.25
UBXN8-207ENST00000615729 ZNF219Q9P2Y4 722 aaPredicted RBP16.58■□□□□ 0.24
UBXN8-207ENST00000615729 PTPRKQ15262 1439 aa16.57■□□□□ 0.24
UBXN8-207ENST00000615729 TOM1O60784 492 aa16.57■□□□□ 0.24
UBXN8-207ENST00000615729 UBTFP17480 764 aaKnown RBP16.57■□□□□ 0.24
UBXN8-207ENST00000615729 SPAG9O60271 1321 aaKnown RBP16.56■□□□□ 0.24
UBXN8-207ENST00000615729 KIDINS220Q9ULH0 1771 aa16.56■□□□□ 0.24
UBXN8-207ENST00000615729 HSPA1LP34931 641 aa16.55■□□□□ 0.24
UBXN8-207ENST00000615729 CDC42BPBQ9Y5S2 1711 aa16.55■□□□□ 0.24
UBXN8-207ENST00000615729 PREX2Q70Z35 1606 aa16.54■□□□□ 0.24
UBXN8-207ENST00000615729 CCDC18Q5T9S5 1454 aa16.53■□□□□ 0.24
UBXN8-207ENST00000615729 KIAA1107Q9UPP5 1409 aa16.53■□□□□ 0.24
UBXN8-207ENST00000615729 SAMD9LQ8IVG5 1584 aa16.52■□□□□ 0.24
UBXN8-207ENST00000615729 ITSN2Q9NZM3 1697 aa16.52■□□□□ 0.23
UBXN8-207ENST00000615729 CEP170BQ9Y4F5 1589 aaPredicted RBP16.51■□□□□ 0.23
UBXN8-207ENST00000615729 ZNF142P52746 1687 aaPredicted RBP16.51■□□□□ 0.23
UBXN8-207ENST00000615729 ABCB7O75027 752 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms